RNA–Protein interactions for RNA: ENST00000528461.5

SEC16B-208, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 3,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-208ENST00000528461 EFCAB5A4FU69 1503 aa20.72■□□□□ 0.91
SEC16B-208ENST00000528461 IFT140Q96RY7 1462 aa20.71■□□□□ 0.91
SEC16B-208ENST00000528461 MAP3K1Q13233 1512 aa20.7■□□□□ 0.91
SEC16B-208ENST00000528461 ZNF608Q9ULD9 1512 aaPredicted RBP20.7■□□□□ 0.91
SEC16B-208ENST00000528461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.7■□□□□ 0.9
SEC16B-208ENST00000528461 ADAMTS12P58397 1594 aa20.69■□□□□ 0.9
SEC16B-208ENST00000528461 TIAM1Q13009 1591 aa20.68■□□□□ 0.9
SEC16B-208ENST00000528461 SAMD9Q5K651 1589 aa20.68■□□□□ 0.9
SEC16B-208ENST00000528461 PCF11O94913 1555 aaKnown RBP20.67■□□□□ 0.9
SEC16B-208ENST00000528461 FHOD3Q2V2M9 1422 aa20.66■□□□□ 0.9
SEC16B-208ENST00000528461 FHAD1B1AJZ9 1412 aa20.66■□□□□ 0.9
SEC16B-208ENST00000528461 GRIN2BQ13224 1484 aa20.65■□□□□ 0.9
SEC16B-208ENST00000528461 ERCC6Q03468 1493 aa20.64■□□□□ 0.89
SEC16B-208ENST00000528461 CFAP43Q8NDM7 1665 aa20.62■□□□□ 0.89
SEC16B-208ENST00000528461 P3H3Q8IVL6 736 aa20.62■□□□□ 0.89
SEC16B-208ENST00000528461 RRBP1Q9P2E9 1410 aaKnown RBP20.61■□□□□ 0.89
SEC16B-208ENST00000528461 EIF4G3O43432 1585 aaKnown RBP20.6■□□□□ 0.89
SEC16B-208ENST00000528461 FYCO1Q9BQS8 1478 aa20.58■□□□□ 0.88
SEC16B-208ENST00000528461 CASKIN1Q8WXD9 1431 aa20.58■□□□□ 0.88
SEC16B-208ENST00000528461 SNAPC4Q5SXM2 1469 aa20.58■□□□□ 0.88
SEC16B-208ENST00000528461 LRRC9Q6ZRR7 1453 aa20.58■□□□□ 0.88
SEC16B-208ENST00000528461 CCER1Q8TC90 406 aaPredicted RBP20.56■□□□□ 0.88
SEC16B-208ENST00000528461 HNRNPUL2Q1KMD3 747 aaKnown RBP20.55■□□□□ 0.88
SEC16B-208ENST00000528461 LRRIQ1Q96JM4 1722 aa20.54■□□□□ 0.88
SEC16B-208ENST00000528461 IQGAP2Q13576 1575 aa20.51■□□□□ 0.87
SEC16B-208ENST00000528461 FMN1Q68DA7 1419 aa20.51■□□□□ 0.87
SEC16B-208ENST00000528461 CCNB3Q8WWL7 1395 aa20.46■□□□□ 0.87
SEC16B-208ENST00000528461 UGGT2Q9NYU1 1516 aa20.45■□□□□ 0.86
SEC16B-208ENST00000528461 PHLDB1Q86UU1 1377 aa20.45■□□□□ 0.86
SEC16B-208ENST00000528461 GRIN2AQ12879 1464 aa20.44■□□□□ 0.86
SEC16B-208ENST00000528461 MAGI1Q96QZ7 1491 aaPredicted RBP20.43■□□□□ 0.86
SEC16B-208ENST00000528461 KIAA0586Q9BVV6 1533 aa20.41■□□□□ 0.86
SEC16B-208ENST00000528461 SYNJ2O15056 1496 aa20.37■□□□□ 0.85
SEC16B-208ENST00000528461 DISP1Q96F81 1524 aa20.37■□□□□ 0.85
SEC16B-208ENST00000528461 CEP170Q5SW79 1584 aa20.37■□□□□ 0.85
SEC16B-208ENST00000528461 ATP1B4Q9UN42 357 aaPredicted RBP20.35■□□□□ 0.85
SEC16B-208ENST00000528461 KIAA0556O60303 1618 aa20.33■□□□□ 0.85
SEC16B-208ENST00000528461 MAGI3Q5TCQ9 1506 aa20.32■□□□□ 0.84
SEC16B-208ENST00000528461 NUP160Q12769 1436 aa20.29■□□□□ 0.84
SEC16B-208ENST00000528461 HECW1Q76N89 1606 aa20.29■□□□□ 0.84
SEC16B-208ENST00000528461 DHX57Q6P158 1386 aaKnown RBP20.27■□□□□ 0.84
SEC16B-208ENST00000528461 ARHGEF11O15085 1522 aa20.27■□□□□ 0.84
SEC16B-208ENST00000528461 CCDC18Q5T9S5 1454 aa20.26■□□□□ 0.83
SEC16B-208ENST00000528461 EPRSP07814 1512 aaKnown RBP20.25■□□□□ 0.83
SEC16B-208ENST00000528461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.25■□□□□ 0.83
SEC16B-208ENST00000528461 EHBP1L1Q8N3D4 1523 aa20.25■□□□□ 0.83
SEC16B-208ENST00000528461 CHMP7Q8WUX9 453 aaPredicted RBP20.24■□□□□ 0.83
SEC16B-208ENST00000528461 MTUS2Q5JR59 1369 aa20.23■□□□□ 0.83
SEC16B-208ENST00000528461 NCOA2Q15596 1464 aa20.23■□□□□ 0.83
SEC16B-208ENST00000528461 SUPT6HQ7KZ85 1726 aaKnown RBP20.22■□□□□ 0.83
SEC16B-208ENST00000528461 FGD6Q6ZV73 1430 aa20.22■□□□□ 0.83
SEC16B-208ENST00000528461 CDK13Q14004 1512 aaKnown RBP20.21■□□□□ 0.83
SEC16B-208ENST00000528461 ITGAEP38570 1179 aa20.19■□□□□ 0.82
SEC16B-208ENST00000528461 NUP153P49790 1475 aaKnown RBP20.17■□□□□ 0.82
SEC16B-208ENST00000528461 RAPGEF6Q8TEU7 1601 aa20.17■□□□□ 0.82
SEC16B-208ENST00000528461 RAB3GAP2Q9H2M9 1393 aa20.17■□□□□ 0.82
SEC16B-208ENST00000528461 CLSPNQ9HAW4 1339 aa20.16■□□□□ 0.82
SEC16B-208ENST00000528461 MYOM3Q5VTT5 1437 aa20.16■□□□□ 0.82
SEC16B-208ENST00000528461 FAM50AQ14320 339 aaKnown RBP20.15■□□□□ 0.82
SEC16B-208ENST00000528461 FBLN2P98095 1184 aa20.14■□□□□ 0.82
SEC16B-208ENST00000528461 SETD5Q9C0A6 1442 aa20.13■□□□□ 0.81
SEC16B-208ENST00000528461 PTPRKQ15262 1439 aa20.12■□□□□ 0.81
SEC16B-208ENST00000528461 JPH4Q96JJ6 628 aa20.12■□□□□ 0.81
SEC16B-208ENST00000528461 CHD1O14646 1710 aa20.1■□□□□ 0.81
SEC16B-208ENST00000528461 PTPN23Q9H3S7 1636 aa20.09■□□□□ 0.81
SEC16B-208ENST00000528461 MAPKBP1O60336 1514 aa20.08■□□□□ 0.81
SEC16B-208ENST00000528461 TCOF1Q13428 1488 aaKnown RBP20.08■□□□□ 0.8
SEC16B-208ENST00000528461 PLB1Q6P1J6 1458 aa20.08■□□□□ 0.8
SEC16B-208ENST00000528461 CARMIL2Q6F5E8 1435 aa20.04■□□□□ 0.8
SEC16B-208ENST00000528461 ARID3CA6NKF2 412 aa20.03■□□□□ 0.8
SEC16B-208ENST00000528461 ABCA8O94911 1581 aa20.03■□□□□ 0.8
SEC16B-208ENST00000528461 SHROOM2Q13796 1616 aa20■□□□□ 0.79
SEC16B-208ENST00000528461 MIA2Q96PC5 1412 aa20■□□□□ 0.79
SEC16B-208ENST00000528461 HFM1A2PYH4 1435 aa19.99■□□□□ 0.79
SEC16B-208ENST00000528461 ADCY10Q96PN6 1610 aa19.96■□□□□ 0.79
SEC16B-208ENST00000528461 NAIPQ13075 1403 aa19.96■□□□□ 0.79
SEC16B-208ENST00000528461 PRG4Q92954 1404 aaPredicted RBP19.96■□□□□ 0.79
SEC16B-208ENST00000528461 TROQ12816 1431 aaPredicted RBP19.94■□□□□ 0.78
SEC16B-208ENST00000528461 ZNF316A6NFI3 1004 aaPredicted RBP19.93■□□□□ 0.78
SEC16B-208ENST00000528461 KIF14Q15058 1648 aa19.92■□□□□ 0.78
SEC16B-208ENST00000528461 ATP10BO94823 1461 aa19.91■□□□□ 0.78
SEC16B-208ENST00000528461 GCC2Q8IWJ2 1684 aa19.9■□□□□ 0.78
SEC16B-208ENST00000528461 ERCC6L2Q5T890 1561 aa19.88■□□□□ 0.77
SEC16B-208ENST00000528461 CDK11AQ9UQ88 783 aaPredicted RBP19.87■□□□□ 0.77
SEC16B-208ENST00000528461 AKNAQ7Z591 1439 aa19.87■□□□□ 0.77
SEC16B-208ENST00000528461 CLASP1Q7Z460 1538 aa19.86■□□□□ 0.77
SEC16B-208ENST00000528461 DNMT1P26358 1616 aaKnown RBP19.86■□□□□ 0.77
SEC16B-208ENST00000528461 KDM6BO15054 1643 aa19.86■□□□□ 0.77
SEC16B-208ENST00000528461 GPATCH8Q9UKJ3 1502 aaKnown RBP19.86■□□□□ 0.77
SEC16B-208ENST00000528461 PTPRGP23470 1445 aa19.85■□□□□ 0.77
SEC16B-208ENST00000528461 DIEXFQ68CQ4 756 aaKnown RBP19.85■□□□□ 0.77
SEC16B-208ENST00000528461 UACAQ9BZF9 1416 aa19.84■□□□□ 0.77
SEC16B-208ENST00000528461 ZNF644Q9H582 1327 aaPredicted RBP19.84■□□□□ 0.77
SEC16B-208ENST00000528461 ITSN2Q9NZM3 1697 aa19.83■□□□□ 0.77
SEC16B-208ENST00000528461 ABCC10Q5T3U5 1492 aa19.83■□□□□ 0.76
SEC16B-208ENST00000528461 ABCC5O15440 1437 aa19.83■□□□□ 0.76
SEC16B-208ENST00000528461 DAPK1P53355 1430 aa19.82■□□□□ 0.76
SEC16B-208ENST00000528461 CDC42BPAQ5VT25 1732 aa19.81■□□□□ 0.76
SEC16B-208ENST00000528461 DENND4BO75064 1496 aaPredicted RBP19.8■□□□□ 0.76
SEC16B-208ENST00000528461 SIN3AQ96ST3 1273 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms