RNA–Protein interactions for RNA: ENST00000528461.5

SEC16B-208, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 3,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-208ENST00000528461 NISCHQ9Y2I1 1504 aa30.04■■■□□ 2.4
SEC16B-208ENST00000528461 CCDC180Q9P1Z9 1646 aa25.96■■□□□ 1.75
SEC16B-208ENST00000528461 ZCCHC6Q5VYS8 1495 aaKnown RBP25.32■■□□□ 1.64
SEC16B-208ENST00000528461 DCAF1Q9Y4B6 1507 aa24.8■■□□□ 1.56
SEC16B-208ENST00000528461 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
SEC16B-208ENST00000528461 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.52
SEC16B-208ENST00000528461 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
SEC16B-208ENST00000528461 ABCC9O60706 1549 aa24.25■■□□□ 1.47
SEC16B-208ENST00000528461 NACADO15069 1562 aa24.07■■□□□ 1.44
SEC16B-208ENST00000528461 SCRIBQ14160 1630 aa23.98■■□□□ 1.43
SEC16B-208ENST00000528461 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
SEC16B-208ENST00000528461 RB1CC1Q8TDY2 1594 aa23.76■■□□□ 1.39
SEC16B-208ENST00000528461 UNC13AQ9UPW8 1703 aa23.48■■□□□ 1.35
SEC16B-208ENST00000528461 RSF1Q96T23 1441 aaPredicted RBP23.47■■□□□ 1.35
SEC16B-208ENST00000528461 CECR2Q9BXF3 1484 aa23.39■■□□□ 1.33
SEC16B-208ENST00000528461 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
SEC16B-208ENST00000528461 CHIC1Q5VXU3 224 aa23.21■■□□□ 1.31
SEC16B-208ENST00000528461 BICRAQ9NZM4 1560 aa23.21■■□□□ 1.31
SEC16B-208ENST00000528461 WIZO95785 1651 aa23.11■■□□□ 1.29
SEC16B-208ENST00000528461 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
SEC16B-208ENST00000528461 SMARCA4P51532 1647 aa23.01■■□□□ 1.27
SEC16B-208ENST00000528461 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.27
SEC16B-208ENST00000528461 TOP2AP11388 1531 aaKnown RBP22.79■■□□□ 1.24
SEC16B-208ENST00000528461 PEG3Q9GZU2 1588 aa22.73■■□□□ 1.23
SEC16B-208ENST00000528461 EIF4G1Q04637 1599 aaKnown RBP22.69■■□□□ 1.22
SEC16B-208ENST00000528461 SMARCA2P51531 1590 aa22.65■■□□□ 1.22
SEC16B-208ENST00000528461 CCDC88BA6NC98 1476 aa22.62■■□□□ 1.21
SEC16B-208ENST00000528461 ATAD2BQ9ULI0 1458 aa22.53■■□□□ 1.2
SEC16B-208ENST00000528461 TRIM41Q8WV44 630 aa22.46■■□□□ 1.19
SEC16B-208ENST00000528461 LOC105371045A0A1W2PR82 267 aa22.38■■□□□ 1.17
SEC16B-208ENST00000528461 BAZ1BQ9UIG0 1483 aaKnown RBP22.36■■□□□ 1.17
SEC16B-208ENST00000528461 ABCC8Q09428 1581 aa22.29■■□□□ 1.16
SEC16B-208ENST00000528461 NCAPD3P42695 1498 aa22.26■■□□□ 1.15
SEC16B-208ENST00000528461 HMGXB3Q12766 1538 aa22.24■■□□□ 1.15
SEC16B-208ENST00000528461 FAM9AQ8IZU1 332 aaPredicted RBP22.11■■□□□ 1.13
SEC16B-208ENST00000528461 WRNQ14191 1432 aaPredicted RBP eCLIP22.01■■□□□ 1.11
SEC16B-208ENST00000528461 SYNJ1O43426 1573 aa22■■□□□ 1.11
SEC16B-208ENST00000528461 CC2D2AQ9P2K1 1620 aa21.97■■□□□ 1.11
SEC16B-208ENST00000528461 SOGA1O94964 1423 aa21.95■■□□□ 1.1
SEC16B-208ENST00000528461 RUSC2Q8N2Y8 1516 aa21.9■■□□□ 1.1
SEC16B-208ENST00000528461 CFTRP13569 1480 aa21.88■■□□□ 1.09
SEC16B-208ENST00000528461 TOP2BQ02880 1626 aa21.83■■□□□ 1.09
SEC16B-208ENST00000528461 EEA1Q15075 1411 aa21.82■■□□□ 1.08
SEC16B-208ENST00000528461 BIVM-ERCC5R4GMW8 1640 aa21.81■■□□□ 1.08
SEC16B-208ENST00000528461 EHMT2Q96KQ7 1210 aa21.81■■□□□ 1.08
SEC16B-208ENST00000528461 PRDM2Q13029 1718 aa21.79■■□□□ 1.08
SEC16B-208ENST00000528461 CSRNP3Q8WYN3 585 aa21.72■■□□□ 1.07
SEC16B-208ENST00000528461 CUX1P39880 1505 aa21.72■■□□□ 1.07
SEC16B-208ENST00000528461 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
SEC16B-208ENST00000528461 PCGF6Q9BYE7 350 aa21.66■■□□□ 1.06
SEC16B-208ENST00000528461 TNIKQ9UKE5 1360 aa21.61■■□□□ 1.05
SEC16B-208ENST00000528461 KIF21BO75037 1637 aa21.61■■□□□ 1.05
SEC16B-208ENST00000528461 GOLGA3Q08378 1498 aa21.57■■□□□ 1.04
SEC16B-208ENST00000528461 CEP162Q5TB80 1403 aa21.54■■□□□ 1.04
SEC16B-208ENST00000528461 CEP164Q9UPV0 1460 aa21.53■■□□□ 1.04
SEC16B-208ENST00000528461 TRIM26Q12899 539 aaPredicted RBP21.52■■□□□ 1.04
SEC16B-208ENST00000528461 NESP48681 1621 aa21.48■■□□□ 1.03
SEC16B-208ENST00000528461 DNAJC5BQ9UF47 199 aa21.47■■□□□ 1.03
SEC16B-208ENST00000528461 RAPGEF2Q9Y4G8 1499 aa21.46■■□□□ 1.03
SEC16B-208ENST00000528461 FANCD2Q9BXW9 1451 aa21.46■■□□□ 1.03
SEC16B-208ENST00000528461 PRXQ9BXM0 1461 aa21.43■■□□□ 1.02
SEC16B-208ENST00000528461 UBTFP17480 764 aaKnown RBP21.42■■□□□ 1.02
SEC16B-208ENST00000528461 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
SEC16B-208ENST00000528461 ERICH3Q5RHP9 1530 aa21.38■■□□□ 1.01
SEC16B-208ENST00000528461 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
SEC16B-208ENST00000528461 KIF27Q86VH2 1401 aa21.37■■□□□ 1.01
SEC16B-208ENST00000528461 HRCP23327 699 aa21.36■■□□□ 1.01
SEC16B-208ENST00000528461 DNMBPQ6XZF7 1577 aa21.33■■□□□ 1.01
SEC16B-208ENST00000528461 TOPBP1Q92547 1522 aa21.3■■□□□ 1
SEC16B-208ENST00000528461 CUX2O14529 1486 aa21.27■■□□□ 1
SEC16B-208ENST00000528461 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
SEC16B-208ENST00000528461 CLIP1P30622 1438 aa21.26■□□□□ 0.99
SEC16B-208ENST00000528461 IGF1RP08069 1367 aa21.25■□□□□ 0.99
SEC16B-208ENST00000528461 URB2Q14146 1524 aaKnown RBP21.24■□□□□ 0.99
SEC16B-208ENST00000528461 POLA1P09884 1462 aaPredicted RBP21.23■□□□□ 0.99
SEC16B-208ENST00000528461 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
SEC16B-208ENST00000528461 RAD54L2Q9Y4B4 1467 aa21.19■□□□□ 0.98
SEC16B-208ENST00000528461 ABCA10Q8WWZ4 1543 aa21.19■□□□□ 0.98
SEC16B-208ENST00000528461 PDS5BQ9NTI5 1447 aa21.17■□□□□ 0.98
SEC16B-208ENST00000528461 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
SEC16B-208ENST00000528461 VPS8Q8N3P4 1428 aa21.14■□□□□ 0.97
SEC16B-208ENST00000528461 ARAP1Q96P48 1450 aa21.1■□□□□ 0.97
SEC16B-208ENST00000528461 CARMIL1Q5VZK9 1371 aa21.08■□□□□ 0.97
SEC16B-208ENST00000528461 ABCA5Q8WWZ7 1642 aa21.02■□□□□ 0.96
SEC16B-208ENST00000528461 ARHGAP35Q9NRY4 1499 aa21.01■□□□□ 0.95
SEC16B-208ENST00000528461 RANGAP1P46060 587 aaPredicted RBP21.01■□□□□ 0.95
SEC16B-208ENST00000528461 TARBP1Q13395 1621 aaKnown RBP21■□□□□ 0.95
SEC16B-208ENST00000528461 CUL7Q14999 1698 aa20.98■□□□□ 0.95
SEC16B-208ENST00000528461 TTBK1Q5TCY1 1321 aaPredicted RBP20.95■□□□□ 0.94
SEC16B-208ENST00000528461 MRC2Q9UBG0 1479 aa20.92■□□□□ 0.94
SEC16B-208ENST00000528461 TDRD9Q8NDG6 1382 aaKnown RBP20.92■□□□□ 0.94
SEC16B-208ENST00000528461 GAPVD1Q14C86 1478 aa20.89■□□□□ 0.94
SEC16B-208ENST00000528461 WDR62O43379 1518 aa20.85■□□□□ 0.93
SEC16B-208ENST00000528461 CTTNBP2Q8WZ74 1663 aa20.84■□□□□ 0.93
SEC16B-208ENST00000528461 PBRM1Q86U86 1689 aa20.8■□□□□ 0.92
SEC16B-208ENST00000528461 KANK4Q5T7N3 995 aaPredicted RBP20.77■□□□□ 0.92
SEC16B-208ENST00000528461 APLP2Q06481 763 aa20.75■□□□□ 0.91
SEC16B-208ENST00000528461 THOC2Q8NI27 1593 aaKnown RBP20.74■□□□□ 0.91
SEC16B-208ENST00000528461 AQRO60306 1485 aaKnown RBP eCLIP20.74■□□□□ 0.913e-7■■■■□ 22.1
SEC16B-208ENST00000528461 ZEB1P37275 1124 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms