RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 KANK4Q5T7N3 995 aaPredicted RBP23.3■■□□□ 1.32
BEST1-204ENST00000524926 ZNF608Q9ULD9 1512 aaPredicted RBP23.3■■□□□ 1.32
BEST1-204ENST00000524926 ZEB1P37275 1124 aaPredicted RBP23.29■■□□□ 1.32
BEST1-204ENST00000524926 GRIN2BQ13224 1484 aa23.28■■□□□ 1.32
BEST1-204ENST00000524926 THOC2Q8NI27 1593 aaKnown RBP23.28■■□□□ 1.32
BEST1-204ENST00000524926 FHAD1B1AJZ9 1412 aa23.27■■□□□ 1.32
BEST1-204ENST00000524926 EFCAB5A4FU69 1503 aa23.25■■□□□ 1.31
BEST1-204ENST00000524926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.24■■□□□ 1.31
BEST1-204ENST00000524926 FHOD3Q2V2M9 1422 aa23.24■■□□□ 1.31
BEST1-204ENST00000524926 ADAMTS12P58397 1594 aa23.21■■□□□ 1.31
BEST1-204ENST00000524926 ATP1B4Q9UN42 357 aaPredicted RBP23.2■■□□□ 1.3
BEST1-204ENST00000524926 CCER1Q8TC90 406 aaPredicted RBP23.19■■□□□ 1.3
BEST1-204ENST00000524926 HNRNPUL2Q1KMD3 747 aaKnown RBP23.19■■□□□ 1.3
BEST1-204ENST00000524926 EIF4G3O43432 1585 aaKnown RBP23.16■■□□□ 1.3
BEST1-204ENST00000524926 PCF11O94913 1555 aaKnown RBP23.13■■□□□ 1.29
BEST1-204ENST00000524926 TIAM1Q13009 1591 aa23.13■■□□□ 1.29
BEST1-204ENST00000524926 SNAPC4Q5SXM2 1469 aa23.12■■□□□ 1.29
BEST1-204ENST00000524926 MAP3K1Q13233 1512 aa23.12■■□□□ 1.29
BEST1-204ENST00000524926 FMN1Q68DA7 1419 aa23.11■■□□□ 1.29
BEST1-204ENST00000524926 SAMD9Q5K651 1589 aa23.1■■□□□ 1.29
BEST1-204ENST00000524926 CASKIN1Q8WXD9 1431 aa23.08■■□□□ 1.29
BEST1-204ENST00000524926 FYCO1Q9BQS8 1478 aa23.07■■□□□ 1.28
BEST1-204ENST00000524926 IQGAP2Q13576 1575 aa23.06■■□□□ 1.28
BEST1-204ENST00000524926 LRRC9Q6ZRR7 1453 aa23.05■■□□□ 1.28
BEST1-204ENST00000524926 CHMP7Q8WUX9 453 aaPredicted RBP23.02■■□□□ 1.28
BEST1-204ENST00000524926 MAGI1Q96QZ7 1491 aaPredicted RBP23.02■■□□□ 1.27
BEST1-204ENST00000524926 GRIN2AQ12879 1464 aa23.01■■□□□ 1.27
BEST1-204ENST00000524926 RRBP1Q9P2E9 1410 aaKnown RBP23.01■■□□□ 1.27
BEST1-204ENST00000524926 CFAP43Q8NDM7 1665 aa23.01■■□□□ 1.27
BEST1-204ENST00000524926 FBLN2P98095 1184 aa23■■□□□ 1.27
BEST1-204ENST00000524926 CCNB3Q8WWL7 1395 aa22.97■■□□□ 1.27
BEST1-204ENST00000524926 KIAA0586Q9BVV6 1533 aa22.96■■□□□ 1.27
BEST1-204ENST00000524926 SYNJ2O15056 1496 aa22.95■■□□□ 1.26
BEST1-204ENST00000524926 UGGT2Q9NYU1 1516 aa22.92■■□□□ 1.26
BEST1-204ENST00000524926 PHLDB1Q86UU1 1377 aa22.9■■□□□ 1.26
BEST1-204ENST00000524926 ITGAEP38570 1179 aa22.89■■□□□ 1.25
BEST1-204ENST00000524926 MTUS2Q5JR59 1369 aa22.87■■□□□ 1.25
BEST1-204ENST00000524926 LRRIQ1Q96JM4 1722 aa22.85■■□□□ 1.25
BEST1-204ENST00000524926 CEP170Q5SW79 1584 aa22.85■■□□□ 1.25
BEST1-204ENST00000524926 FAM50AQ14320 339 aaKnown RBP22.82■■□□□ 1.24
BEST1-204ENST00000524926 DISP1Q96F81 1524 aa22.82■■□□□ 1.24
BEST1-204ENST00000524926 KIAA0556O60303 1618 aa22.81■■□□□ 1.24
BEST1-204ENST00000524926 HECW1Q76N89 1606 aa22.79■■□□□ 1.24
BEST1-204ENST00000524926 NUP160Q12769 1436 aa22.79■■□□□ 1.24
BEST1-204ENST00000524926 CCDC18Q5T9S5 1454 aa22.78■■□□□ 1.24
BEST1-204ENST00000524926 JPH4Q96JJ6 628 aa22.77■■□□□ 1.24
BEST1-204ENST00000524926 ARID3CA6NKF2 412 aa22.76■■□□□ 1.23
BEST1-204ENST00000524926 EPRSP07814 1512 aaKnown RBP22.74■■□□□ 1.23
BEST1-204ENST00000524926 EHBP1L1Q8N3D4 1523 aa22.72■■□□□ 1.23
BEST1-204ENST00000524926 NCOA2Q15596 1464 aa22.71■■□□□ 1.23
BEST1-204ENST00000524926 CARMIL2Q6F5E8 1435 aa22.7■■□□□ 1.22
BEST1-204ENST00000524926 SUPT6HQ7KZ85 1726 aaKnown RBP22.7■■□□□ 1.22
BEST1-204ENST00000524926 CDK13Q14004 1512 aaKnown RBP22.69■■□□□ 1.22
BEST1-204ENST00000524926 MAGI3Q5TCQ9 1506 aa22.69■■□□□ 1.22
BEST1-204ENST00000524926 FGD6Q6ZV73 1430 aa22.68■■□□□ 1.22
BEST1-204ENST00000524926 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.66■■□□□ 1.22
BEST1-204ENST00000524926 DHX57Q6P158 1386 aaKnown RBP22.65■■□□□ 1.22
BEST1-204ENST00000524926 RAPGEF6Q8TEU7 1601 aa22.64■■□□□ 1.22
BEST1-204ENST00000524926 MYOM3Q5VTT5 1437 aa22.64■■□□□ 1.21
BEST1-204ENST00000524926 NUP153P49790 1475 aaKnown RBP22.62■■□□□ 1.21
BEST1-204ENST00000524926 RAB3GAP2Q9H2M9 1393 aa22.61■■□□□ 1.21
BEST1-204ENST00000524926 CHD1O14646 1710 aa22.6■■□□□ 1.21
BEST1-204ENST00000524926 SETD5Q9C0A6 1442 aa22.59■■□□□ 1.21
BEST1-204ENST00000524926 PLB1Q6P1J6 1458 aa22.59■■□□□ 1.21
BEST1-204ENST00000524926 ARHGEF11O15085 1522 aa22.58■■□□□ 1.21
BEST1-204ENST00000524926 CDK11AQ9UQ88 783 aaPredicted RBP22.58■■□□□ 1.2
BEST1-204ENST00000524926 CLSPNQ9HAW4 1339 aa22.57■■□□□ 1.2
BEST1-204ENST00000524926 PRG4Q92954 1404 aaPredicted RBP22.54■■□□□ 1.2
BEST1-204ENST00000524926 PTPN23Q9H3S7 1636 aa22.52■■□□□ 1.19
BEST1-204ENST00000524926 PTPRKQ15262 1439 aa22.47■■□□□ 1.19
BEST1-204ENST00000524926 PTPRGP23470 1445 aa22.46■■□□□ 1.19
BEST1-204ENST00000524926 MIA2Q96PC5 1412 aa22.45■■□□□ 1.18
BEST1-204ENST00000524926 ABCA8O94911 1581 aa22.44■■□□□ 1.18
BEST1-204ENST00000524926 TCOF1Q13428 1488 aaKnown RBP22.44■■□□□ 1.18
BEST1-204ENST00000524926 TROQ12816 1431 aaPredicted RBP22.43■■□□□ 1.18
BEST1-204ENST00000524926 PLEKHD1A6NEE1 506 aa22.4■■□□□ 1.18
BEST1-204ENST00000524926 HFM1A2PYH4 1435 aa22.39■■□□□ 1.17
BEST1-204ENST00000524926 SHROOM2Q13796 1616 aa22.38■■□□□ 1.17
BEST1-204ENST00000524926 CHIC2Q9UKJ5 165 aa22.38■■□□□ 1.17
BEST1-204ENST00000524926 ATP10BO94823 1461 aa22.38■■□□□ 1.17
BEST1-204ENST00000524926 ZNF316A6NFI3 1004 aaPredicted RBP22.35■■□□□ 1.17
BEST1-204ENST00000524926 MAPKBP1O60336 1514 aa22.34■■□□□ 1.17
BEST1-204ENST00000524926 NAIPQ13075 1403 aa22.34■■□□□ 1.17
BEST1-204ENST00000524926 RRP7BPQ9NSQ0 103 aa22.34■■□□□ 1.17
BEST1-204ENST00000524926 ZNF644Q9H582 1327 aaPredicted RBP22.33■■□□□ 1.16
BEST1-204ENST00000524926 CFDP1Q9UEE9 299 aaPredicted RBP22.32■■□□□ 1.16
BEST1-204ENST00000524926 KIF14Q15058 1648 aa22.32■■□□□ 1.16
BEST1-204ENST00000524926 ERCC6L2Q5T890 1561 aa22.31■■□□□ 1.16
BEST1-204ENST00000524926 UACAQ9BZF9 1416 aa22.3■■□□□ 1.16
BEST1-204ENST00000524926 ADCY10Q96PN6 1610 aa22.3■■□□□ 1.16
BEST1-204ENST00000524926 CLASP1Q7Z460 1538 aa22.29■■□□□ 1.16
BEST1-204ENST00000524926 GPATCH8Q9UKJ3 1502 aaKnown RBP22.28■■□□□ 1.16
BEST1-204ENST00000524926 ZNF777Q9ULD5 760 aaPredicted RBP22.28■■□□□ 1.16
BEST1-204ENST00000524926 ITSN2Q9NZM3 1697 aa22.26■■□□□ 1.15
BEST1-204ENST00000524926 DAPK1P53355 1430 aa22.26■■□□□ 1.15
BEST1-204ENST00000524926 DIEXFQ68CQ4 756 aaKnown RBP22.26■■□□□ 1.15
BEST1-204ENST00000524926 NEUROD1Q13562 356 aa22.25■■□□□ 1.15
BEST1-204ENST00000524926 SIN3AQ96ST3 1273 aa22.25■■□□□ 1.15
BEST1-204ENST00000524926 ABCC5O15440 1437 aa22.23■■□□□ 1.15
BEST1-204ENST00000524926 AKNAQ7Z591 1439 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms