RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 NISCHQ9Y2I1 1504 aa33.65■■■□□ 2.98
BEST1-204ENST00000524926 CCDC180Q9P1Z9 1646 aa29.07■■■□□ 2.24
BEST1-204ENST00000524926 ZCCHC6Q5VYS8 1495 aaKnown RBP28.3■■■□□ 2.12
BEST1-204ENST00000524926 DCAF8L2P0C7V8 631 aa28.01■■■□□ 2.07
BEST1-204ENST00000524926 SHROOM4Q9ULL8 1493 aa27.93■■■□□ 2.06
BEST1-204ENST00000524926 DCAF1Q9Y4B6 1507 aa27.71■■■□□ 2.03
BEST1-204ENST00000524926 ABCC9O60706 1549 aa27.44■■□□□ 1.98
BEST1-204ENST00000524926 MYO15BQ96JP2 1530 aa27.24■■□□□ 1.95
BEST1-204ENST00000524926 SUPT5HO00267 1087 aaKnown RBP27.07■■□□□ 1.92
BEST1-204ENST00000524926 NACADO15069 1562 aa27.06■■□□□ 1.92
BEST1-204ENST00000524926 SCRIBQ14160 1630 aa26.96■■□□□ 1.91
BEST1-204ENST00000524926 RB1CC1Q8TDY2 1594 aa26.78■■□□□ 1.88
BEST1-204ENST00000524926 RSF1Q96T23 1441 aaPredicted RBP26.28■■□□□ 1.8
BEST1-204ENST00000524926 UNC13AQ9UPW8 1703 aa26.26■■□□□ 1.79
BEST1-204ENST00000524926 CECR2Q9BXF3 1484 aa26.21■■□□□ 1.79
BEST1-204ENST00000524926 MROH2BQ7Z745 1585 aa26.06■■□□□ 1.76
BEST1-204ENST00000524926 PABPN1Q86U42 306 aaKnown RBP eCLIP26.04■■□□□ 1.76
BEST1-204ENST00000524926 BICRAQ9NZM4 1560 aa25.97■■□□□ 1.75
BEST1-204ENST00000524926 CHIC1Q5VXU3 224 aa25.97■■□□□ 1.75
BEST1-204ENST00000524926 BAZ1AQ9NRL2 1556 aaPredicted RBP25.94■■□□□ 1.74
BEST1-204ENST00000524926 WIZO95785 1651 aa25.88■■□□□ 1.73
BEST1-204ENST00000524926 SMARCA4P51532 1647 aa25.79■■□□□ 1.72
BEST1-204ENST00000524926 TOP2AP11388 1531 aaKnown RBP25.54■■□□□ 1.68
BEST1-204ENST00000524926 PEG3Q9GZU2 1588 aa25.38■■□□□ 1.65
BEST1-204ENST00000524926 CCDC88BA6NC98 1476 aa25.36■■□□□ 1.65
BEST1-204ENST00000524926 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
BEST1-204ENST00000524926 SMARCA2P51531 1590 aa25.33■■□□□ 1.65
BEST1-204ENST00000524926 ATAD2BQ9ULI0 1458 aa25.31■■□□□ 1.64
BEST1-204ENST00000524926 BAZ1BQ9UIG0 1483 aaKnown RBP25.21■■□□□ 1.63
BEST1-204ENST00000524926 EIF4G1Q04637 1599 aaKnown RBP25.19■■□□□ 1.62
BEST1-204ENST00000524926 LOC105371045A0A1W2PR82 267 aa25.1■■□□□ 1.61
BEST1-204ENST00000524926 FAM9AQ8IZU1 332 aaPredicted RBP25.01■■□□□ 1.59
BEST1-204ENST00000524926 NCAPD3P42695 1498 aa25.01■■□□□ 1.59
BEST1-204ENST00000524926 ABCC8Q09428 1581 aa24.98■■□□□ 1.59
BEST1-204ENST00000524926 HMGXB3Q12766 1538 aa24.95■■□□□ 1.58
BEST1-204ENST00000524926 CC2D2AQ9P2K1 1620 aa24.76■■□□□ 1.55
BEST1-204ENST00000524926 WRNQ14191 1432 aaPredicted RBP eCLIP24.74■■□□□ 1.55
BEST1-204ENST00000524926 EHMT2Q96KQ7 1210 aa24.73■■□□□ 1.55
BEST1-204ENST00000524926 SYNJ1O43426 1573 aa24.6■■□□□ 1.53
BEST1-204ENST00000524926 SOGA1O94964 1423 aa24.59■■□□□ 1.53
BEST1-204ENST00000524926 CFTRP13569 1480 aa24.56■■□□□ 1.52
BEST1-204ENST00000524926 RUSC2Q8N2Y8 1516 aa24.49■■□□□ 1.51
BEST1-204ENST00000524926 EEA1Q15075 1411 aa24.48■■□□□ 1.51
BEST1-204ENST00000524926 CSRNP3Q8WYN3 585 aa24.46■■□□□ 1.51
BEST1-204ENST00000524926 CADPSQ9ULU8 1353 aa24.45■■□□□ 1.5
BEST1-204ENST00000524926 TOP2BQ02880 1626 aa24.43■■□□□ 1.5
BEST1-204ENST00000524926 BIVM-ERCC5R4GMW8 1640 aa24.36■■□□□ 1.49
BEST1-204ENST00000524926 PRDM2Q13029 1718 aa24.36■■□□□ 1.49
BEST1-204ENST00000524926 CUX1P39880 1505 aa24.33■■□□□ 1.48
BEST1-204ENST00000524926 PCGF6Q9BYE7 350 aa24.31■■□□□ 1.48
BEST1-204ENST00000524926 UBTFP17480 764 aaKnown RBP24.26■■□□□ 1.47
BEST1-204ENST00000524926 GOLGA3Q08378 1498 aa24.21■■□□□ 1.47
BEST1-204ENST00000524926 TNIKQ9UKE5 1360 aa24.21■■□□□ 1.47
BEST1-204ENST00000524926 DNAJC5BQ9UF47 199 aa24.2■■□□□ 1.46
BEST1-204ENST00000524926 FANCD2Q9BXW9 1451 aa24.18■■□□□ 1.46
BEST1-204ENST00000524926 NESP48681 1621 aa24.18■■□□□ 1.46
BEST1-204ENST00000524926 CEP164Q9UPV0 1460 aa24.18■■□□□ 1.46
BEST1-204ENST00000524926 CEP162Q5TB80 1403 aa24.14■■□□□ 1.45
BEST1-204ENST00000524926 KIF21BO75037 1637 aa24.14■■□□□ 1.45
BEST1-204ENST00000524926 TRIM26Q12899 539 aaPredicted RBP24.13■■□□□ 1.45
BEST1-204ENST00000524926 LAMC3Q9Y6N6 1575 aa24.08■■□□□ 1.45
BEST1-204ENST00000524926 KIF27Q86VH2 1401 aa24.08■■□□□ 1.45
BEST1-204ENST00000524926 RAPGEF2Q9Y4G8 1499 aa24.05■■□□□ 1.44
BEST1-204ENST00000524926 FGD5Q6ZNL6 1462 aa24.03■■□□□ 1.44
BEST1-204ENST00000524926 PPARGC1BQ86YN6 1023 aaKnown RBP23.97■■□□□ 1.43
BEST1-204ENST00000524926 CUX2O14529 1486 aa23.97■■□□□ 1.43
BEST1-204ENST00000524926 DNMBPQ6XZF7 1577 aa23.96■■□□□ 1.43
BEST1-204ENST00000524926 PRXQ9BXM0 1461 aa23.96■■□□□ 1.43
BEST1-204ENST00000524926 PDS5BQ9NTI5 1447 aa23.95■■□□□ 1.43
BEST1-204ENST00000524926 TOPBP1Q92547 1522 aa23.94■■□□□ 1.42
BEST1-204ENST00000524926 ERICH3Q5RHP9 1530 aa23.91■■□□□ 1.42
BEST1-204ENST00000524926 RANGAP1P46060 587 aaPredicted RBP23.89■■□□□ 1.41
BEST1-204ENST00000524926 CLIP1P30622 1438 aa23.88■■□□□ 1.41
BEST1-204ENST00000524926 POLA1P09884 1462 aaPredicted RBP23.86■■□□□ 1.41
BEST1-204ENST00000524926 IGF1RP08069 1367 aa23.85■■□□□ 1.41
BEST1-204ENST00000524926 URB2Q14146 1524 aaKnown RBP23.85■■□□□ 1.41
BEST1-204ENST00000524926 RAD54L2Q9Y4B4 1467 aa23.85■■□□□ 1.41
BEST1-204ENST00000524926 KIF21AQ7Z4S6 1674 aa23.81■■□□□ 1.4
BEST1-204ENST00000524926 HRCP23327 699 aa23.78■■□□□ 1.4
BEST1-204ENST00000524926 ABCA10Q8WWZ4 1543 aa23.77■■□□□ 1.4
BEST1-204ENST00000524926 CARMIL1Q5VZK9 1371 aa23.75■■□□□ 1.39
BEST1-204ENST00000524926 TTBK1Q5TCY1 1321 aaPredicted RBP23.74■■□□□ 1.39
BEST1-204ENST00000524926 VPS8Q8N3P4 1428 aa23.69■■□□□ 1.38
BEST1-204ENST00000524926 TDRD9Q8NDG6 1382 aaKnown RBP23.62■■□□□ 1.37
BEST1-204ENST00000524926 WDR97A6NE52 1622 aa23.61■■□□□ 1.37
BEST1-204ENST00000524926 APLP2Q06481 763 aa23.6■■□□□ 1.37
BEST1-204ENST00000524926 MRC2Q9UBG0 1479 aa23.6■■□□□ 1.37
BEST1-204ENST00000524926 ARAP1Q96P48 1450 aa23.56■■□□□ 1.36
BEST1-204ENST00000524926 GAPVD1Q14C86 1478 aa23.55■■□□□ 1.36
BEST1-204ENST00000524926 CUL7Q14999 1698 aa23.53■■□□□ 1.36
BEST1-204ENST00000524926 ABCA5Q8WWZ7 1642 aa23.53■■□□□ 1.36
BEST1-204ENST00000524926 ARHGAP35Q9NRY4 1499 aa23.51■■□□□ 1.35
BEST1-204ENST00000524926 TARBP1Q13395 1621 aaKnown RBP23.51■■□□□ 1.35
BEST1-204ENST00000524926 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
BEST1-204ENST00000524926 WDR62O43379 1518 aa23.43■■□□□ 1.34
BEST1-204ENST00000524926 AQRO60306 1485 aaKnown RBP eCLIP23.4■■□□□ 1.34
BEST1-204ENST00000524926 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
BEST1-204ENST00000524926 P3H3Q8IVL6 736 aa23.36■■□□□ 1.33
BEST1-204ENST00000524926 CTTNBP2Q8WZ74 1663 aa23.34■■□□□ 1.33
BEST1-204ENST00000524926 PBRM1Q86U86 1689 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms