RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 EHMT2Q96KQ7 1210 aa34.99■■■■□ 3.19
NKX6-3-202ENST00000524115 CSRNP3Q8WYN3 585 aa34.98■■■■□ 3.19
NKX6-3-202ENST00000524115 KIF27Q86VH2 1401 aa34.97■■■■□ 3.19
NKX6-3-202ENST00000524115 NUP160Q12769 1436 aa34.97■■■■□ 3.19
NKX6-3-202ENST00000524115 IGF1RP08069 1367 aa34.93■■■■□ 3.18
NKX6-3-202ENST00000524115 CEP170Q5SW79 1584 aa34.89■■■■□ 3.18
NKX6-3-202ENST00000524115 GOLGA3Q08378 1498 aa34.87■■■■□ 3.17
NKX6-3-202ENST00000524115 CEP162Q5TB80 1403 aa34.85■■■■□ 3.17
NKX6-3-202ENST00000524115 PPARGC1BQ86YN6 1023 aaKnown RBP34.8■■■■□ 3.16
NKX6-3-202ENST00000524115 KIF21BO75037 1637 aa34.75■■■■□ 3.15
NKX6-3-202ENST00000524115 RUSC2Q8N2Y8 1516 aa34.72■■■■□ 3.15
NKX6-3-202ENST00000524115 JPH4Q96JJ6 628 aa34.71■■■■□ 3.15
NKX6-3-202ENST00000524115 CARMIL1Q5VZK9 1371 aa34.7■■■■□ 3.15
NKX6-3-202ENST00000524115 ERCC6L2Q5T890 1561 aa34.68■■■■□ 3.14
NKX6-3-202ENST00000524115 CUL7Q14999 1698 aa34.64■■■■□ 3.14
NKX6-3-202ENST00000524115 UBTFP17480 764 aaKnown RBP34.63■■■■□ 3.13
NKX6-3-202ENST00000524115 SHROOM2Q13796 1616 aa34.63■■■■□ 3.13
NKX6-3-202ENST00000524115 PRG4Q92954 1404 aaPredicted RBP34.61■■■■□ 3.13
NKX6-3-202ENST00000524115 KIAA0586Q9BVV6 1533 aa34.56■■■■□ 3.12
NKX6-3-202ENST00000524115 TRHP20396 242 aaPredicted RBP34.52■■■■□ 3.12
NKX6-3-202ENST00000524115 RAPGEF2Q9Y4G8 1499 aa34.4■■■■□ 3.1
NKX6-3-202ENST00000524115 CLIP1P30622 1438 aa34.33■■■■□ 3.09
NKX6-3-202ENST00000524115 IQGAP2Q13576 1575 aa34.22■■■■□ 3.07
NKX6-3-202ENST00000524115 VPS8Q8N3P4 1428 aa34.22■■■■□ 3.07
NKX6-3-202ENST00000524115 CARMIL2Q6F5E8 1435 aa34.2■■■■□ 3.07
NKX6-3-202ENST00000524115 PRXQ9BXM0 1461 aa34.2■■■■□ 3.07
NKX6-3-202ENST00000524115 PTPRGP23470 1445 aa34.18■■■■□ 3.06
NKX6-3-202ENST00000524115 TTBK1Q5TCY1 1321 aaPredicted RBP34.15■■■■□ 3.06
NKX6-3-202ENST00000524115 CCER1Q8TC90 406 aaPredicted RBP34.15■■■■□ 3.06
NKX6-3-202ENST00000524115 NPM1P06748 294 aaKnown RBP eCLIP34.13■■■■□ 3.05
NKX6-3-202ENST00000524115 DISP1Q96F81 1524 aa34.09■■■■□ 3.05
NKX6-3-202ENST00000524115 UGGT2Q9NYU1 1516 aa34.07■■■■□ 3.05
NKX6-3-202ENST00000524115 APLP2Q06481 763 aa34.03■■■■□ 3.04
NKX6-3-202ENST00000524115 ADCY10Q96PN6 1610 aa34.03■■■■□ 3.04
NKX6-3-202ENST00000524115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.01■■■■□ 3.04
NKX6-3-202ENST00000524115 UACAQ9BZF9 1416 aa33.9■■■■□ 3.02
NKX6-3-202ENST00000524115 MAPKBP1O60336 1514 aa33.9■■■■□ 3.02
NKX6-3-202ENST00000524115 KIAA0556O60303 1618 aa33.89■■■■□ 3.02
NKX6-3-202ENST00000524115 FAM69CQ0P6D2 419 aa33.88■■■■□ 3.01
NKX6-3-202ENST00000524115 CTTNBP2Q8WZ74 1663 aa33.88■■■■□ 3.01
NKX6-3-202ENST00000524115 UHRF1BP1LA0JNW5 1464 aa33.86■■■■□ 3.01
NKX6-3-202ENST00000524115 ABCC10Q5T3U5 1492 aa33.85■■■■□ 3.01
NKX6-3-202ENST00000524115 ABCC2Q92887 1545 aa33.85■■■■□ 3.01
NKX6-3-202ENST00000524115 P3H3Q8IVL6 736 aa33.74■■■□□ 2.99
NKX6-3-202ENST00000524115 KIF13AQ9H1H9 1805 aa33.71■■■□□ 2.99
NKX6-3-202ENST00000524115 PLB1Q6P1J6 1458 aa33.7■■■□□ 2.99
NKX6-3-202ENST00000524115 ASXL2Q76L83 1435 aa33.7■■■□□ 2.99
NKX6-3-202ENST00000524115 KDM5BQ9UGL1 1544 aa33.7■■■□□ 2.99
NKX6-3-202ENST00000524115 DIP2BQ9P265 1576 aa33.69■■■□□ 2.98
NKX6-3-202ENST00000524115 RANGAP1P46060 587 aaPredicted RBP33.64■■■□□ 2.98
NKX6-3-202ENST00000524115 ABCA8O94911 1581 aa33.58■■■□□ 2.97
NKX6-3-202ENST00000524115 ARHGAP35Q9NRY4 1499 aa33.54■■■□□ 2.96
NKX6-3-202ENST00000524115 SAMD9Q5K651 1589 aa33.54■■■□□ 2.96
NKX6-3-202ENST00000524115 ZCCHC11Q5TAX3 1644 aaKnown RBP33.53■■■□□ 2.96
NKX6-3-202ENST00000524115 HNRNPUL2Q1KMD3 747 aaKnown RBP33.48■■■□□ 2.95
NKX6-3-202ENST00000524115 EPRSP07814 1512 aaKnown RBP33.48■■■□□ 2.95
NKX6-3-202ENST00000524115 MAP3K1Q13233 1512 aa33.48■■■□□ 2.95
NKX6-3-202ENST00000524115 GLI2P10070 1586 aa33.47■■■□□ 2.95
NKX6-3-202ENST00000524115 ARID3CA6NKF2 412 aa33.46■■■□□ 2.95
NKX6-3-202ENST00000524115 FHOD3Q2V2M9 1422 aa33.44■■■□□ 2.94
NKX6-3-202ENST00000524115 WDR7Q9Y4E6 1490 aa33.44■■■□□ 2.94
NKX6-3-202ENST00000524115 CLSPNQ9HAW4 1339 aa33.42■■■□□ 2.94
NKX6-3-202ENST00000524115 RRBP1Q9P2E9 1410 aaKnown RBP33.41■■■□□ 2.94
NKX6-3-202ENST00000524115 KCNH8Q96L42 1107 aa33.39■■■□□ 2.94
NKX6-3-202ENST00000524115 ATP10BO94823 1461 aa33.39■■■□□ 2.94
NKX6-3-202ENST00000524115 EFCAB5A4FU69 1503 aa33.35■■■□□ 2.93
NKX6-3-202ENST00000524115 TSPOAP1O95153 1857 aa33.34■■■□□ 2.93
NKX6-3-202ENST00000524115 DIEXFQ68CQ4 756 aaKnown RBP33.29■■■□□ 2.92
NKX6-3-202ENST00000524115 RAPGEF6Q8TEU7 1601 aa33.29■■■□□ 2.92
NKX6-3-202ENST00000524115 KANK4Q5T7N3 995 aaPredicted RBP33.29■■■□□ 2.92
NKX6-3-202ENST00000524115 ZNF316A6NFI3 1004 aaPredicted RBP33.28■■■□□ 2.92
NKX6-3-202ENST00000524115 NUP153P49790 1475 aaKnown RBP33.26■■■□□ 2.92
NKX6-3-202ENST00000524115 KDM6BO15054 1643 aa33.25■■■□□ 2.91
NKX6-3-202ENST00000524115 MAP3K4Q9Y6R4 1608 aa33.25■■■□□ 2.91
NKX6-3-202ENST00000524115 TIAM1Q13009 1591 aa33.23■■■□□ 2.91
NKX6-3-202ENST00000524115 PPRC1Q5VV67 1664 aaKnown RBP33.23■■■□□ 2.91
NKX6-3-202ENST00000524115 CD109Q6YHK3 1445 aa33.22■■■□□ 2.91
NKX6-3-202ENST00000524115 CCNB3Q8WWL7 1395 aa33.2■■■□□ 2.91
NKX6-3-202ENST00000524115 TEX14Q8IWB6 1497 aa33.2■■■□□ 2.91
NKX6-3-202ENST00000524115 COL17A1Q9UMD9 1497 aaPredicted RBP33.14■■■□□ 2.9
NKX6-3-202ENST00000524115 MAGI3Q5TCQ9 1506 aa33.13■■■□□ 2.89
NKX6-3-202ENST00000524115 PLEKHD1A6NEE1 506 aa33.12■■■□□ 2.89
NKX6-3-202ENST00000524115 FMN1Q68DA7 1419 aa33.11■■■□□ 2.89
NKX6-3-202ENST00000524115 ATP1B4Q9UN42 357 aaPredicted RBP33.08■■■□□ 2.89
NKX6-3-202ENST00000524115 CFAP43Q8NDM7 1665 aa33.08■■■□□ 2.89
NKX6-3-202ENST00000524115 LRRC9Q6ZRR7 1453 aa33.08■■■□□ 2.89
NKX6-3-202ENST00000524115 DHX57Q6P158 1386 aaKnown RBP33.07■■■□□ 2.88
NKX6-3-202ENST00000524115 FYCO1Q9BQS8 1478 aa33.04■■■□□ 2.88
NKX6-3-202ENST00000524115 AEBP2Q6ZN18 517 aaPredicted RBP33.04■■■□□ 2.88
NKX6-3-202ENST00000524115 CASKIN1Q8WXD9 1431 aa32.98■■■□□ 2.87
NKX6-3-202ENST00000524115 ABCA9Q8IUA7 1624 aa32.97■■■□□ 2.87
NKX6-3-202ENST00000524115 CDK13Q14004 1512 aaKnown RBP32.97■■■□□ 2.87
NKX6-3-202ENST00000524115 PCF11O94913 1555 aaKnown RBP32.97■■■□□ 2.87
NKX6-3-202ENST00000524115 CENPBP07199 599 aaPredicted RBP32.94■■■□□ 2.86
NKX6-3-202ENST00000524115 HECW1Q76N89 1606 aa32.9■■■□□ 2.86
NKX6-3-202ENST00000524115 PHLDB1Q86UU1 1377 aa32.89■■■□□ 2.86
NKX6-3-202ENST00000524115 CDK11AQ9UQ88 783 aaPredicted RBP32.89■■■□□ 2.86
NKX6-3-202ENST00000524115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.88■■■□□ 2.85
NKX6-3-202ENST00000524115 ARAP3Q8WWN8 1544 aa32.85■■■□□ 2.85
NKX6-3-202ENST00000524115 KDM4FA0A1W2PPD8 638 aa32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms