RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 BIVM-ERCC5R4GMW8 1640 aa16.94■□□□□ 0.3
PTPN12-216ENST00000523952 WRNQ14191 1432 aaPredicted RBP eCLIP16.94■□□□□ 0.3
PTPN12-216ENST00000523952 FHAD1B1AJZ9 1412 aa16.91■□□□□ 0.3
PTPN12-216ENST00000523952 TOP2BQ02880 1626 aa16.88■□□□□ 0.29
PTPN12-216ENST00000523952 ERICH3Q5RHP9 1530 aa16.88■□□□□ 0.29
PTPN12-216ENST00000523952 NPM1P06748 294 aaKnown RBP eCLIP16.88■□□□□ 0.29
PTPN12-216ENST00000523952 PRG4Q92954 1404 aaPredicted RBP16.87■□□□□ 0.29
PTPN12-216ENST00000523952 KDM6BO15054 1643 aa16.87■□□□□ 0.29
PTPN12-216ENST00000523952 FAM69CQ0P6D2 419 aa16.85■□□□□ 0.29
PTPN12-216ENST00000523952 DIP2BQ9P265 1576 aa16.84■□□□□ 0.29
PTPN12-216ENST00000523952 RUSC2Q8N2Y8 1516 aa16.82■□□□□ 0.28
PTPN12-216ENST00000523952 ABCC10Q5T3U5 1492 aa16.82■□□□□ 0.28
PTPN12-216ENST00000523952 MAPKBP1O60336 1514 aa16.81■□□□□ 0.28
PTPN12-216ENST00000523952 JPH4Q96JJ6 628 aa16.8■□□□□ 0.28
PTPN12-216ENST00000523952 ADCY10Q96PN6 1610 aa16.8■□□□□ 0.28
PTPN12-216ENST00000523952 PPP6R1Q9UPN7 881 aa16.74■□□□□ 0.27
PTPN12-216ENST00000523952 SUPT5HO00267 1087 aaKnown RBP16.73■□□□□ 0.27
PTPN12-216ENST00000523952 KDM4FA0A1W2PPD8 638 aa16.68■□□□□ 0.26
PTPN12-216ENST00000523952 CUL7Q14999 1698 aa16.67■□□□□ 0.26
PTPN12-216ENST00000523952 ADRA2BP18089 450 aa16.67■□□□□ 0.26
PTPN12-216ENST00000523952 PLPPR3Q6T4P5 718 aa16.65■□□□□ 0.26
PTPN12-216ENST00000523952 ILDR1Q86SU0 546 aaPredicted RBP16.65■□□□□ 0.26
PTPN12-216ENST00000523952 KIAA0586Q9BVV6 1533 aa16.61■□□□□ 0.25
PTPN12-216ENST00000523952 TTBK1Q5TCY1 1321 aaPredicted RBP16.61■□□□□ 0.25
PTPN12-216ENST00000523952 PPRC1Q5VV67 1664 aaKnown RBP16.6■□□□□ 0.25
PTPN12-216ENST00000523952 ADGRL1O94910 1474 aa16.56■□□□□ 0.24
PTPN12-216ENST00000523952 PTPRGP23470 1445 aa16.55■□□□□ 0.24
PTPN12-216ENST00000523952 GLI2P10070 1586 aa16.54■□□□□ 0.24
PTPN12-216ENST00000523952 CARMIL2Q6F5E8 1435 aa16.53■□□□□ 0.24
PTPN12-216ENST00000523952 ABCC2Q92887 1545 aa16.53■□□□□ 0.24
PTPN12-216ENST00000523952 PLB1Q6P1J6 1458 aa16.52■□□□□ 0.23
PTPN12-216ENST00000523952 HECW2Q9P2P5 1572 aa16.51■□□□□ 0.23
PTPN12-216ENST00000523952 ASXL2Q76L83 1435 aa16.51■□□□□ 0.23
PTPN12-216ENST00000523952 KIF27Q86VH2 1401 aa16.51■□□□□ 0.23
PTPN12-216ENST00000523952 MAP3K4Q9Y6R4 1608 aa16.5■□□□□ 0.23
PTPN12-216ENST00000523952 IQGAP2Q13576 1575 aa16.49■□□□□ 0.23
PTPN12-216ENST00000523952 TNIKQ9UKE5 1360 aa16.49■□□□□ 0.23
PTPN12-216ENST00000523952 TEX14Q8IWB6 1497 aa16.47■□□□□ 0.23
PTPN12-216ENST00000523952 ZCCHC11Q5TAX3 1644 aaKnown RBP16.46■□□□□ 0.23
PTPN12-216ENST00000523952 IGF1RP08069 1367 aa16.46■□□□□ 0.23
PTPN12-216ENST00000523952 UHRF1BP1LA0JNW5 1464 aa16.42■□□□□ 0.22
PTPN12-216ENST00000523952 UACAQ9BZF9 1416 aa16.41■□□□□ 0.22
PTPN12-216ENST00000523952 EPRSP07814 1512 aaKnown RBP16.4■□□□□ 0.22
PTPN12-216ENST00000523952 CARMIL1Q5VZK9 1371 aa16.4■□□□□ 0.22
PTPN12-216ENST00000523952 CFAP43Q8NDM7 1665 aa16.37■□□□□ 0.21
PTPN12-216ENST00000523952 KDM5BQ9UGL1 1544 aa16.36■□□□□ 0.21
PTPN12-216ENST00000523952 COL17A1Q9UMD9 1497 aaPredicted RBP16.35■□□□□ 0.21
PTPN12-216ENST00000523952 CTTNBP2Q8WZ74 1663 aa16.35■□□□□ 0.21
PTPN12-216ENST00000523952 DISP1Q96F81 1524 aa16.34■□□□□ 0.21
PTPN12-216ENST00000523952 KIAA0556O60303 1618 aa16.34■□□□□ 0.21
PTPN12-216ENST00000523952 KIF21BO75037 1637 aa16.34■□□□□ 0.21
PTPN12-216ENST00000523952 UGGT2Q9NYU1 1516 aa16.29■□□□□ 0.2
PTPN12-216ENST00000523952 WDR7Q9Y4E6 1490 aa16.29■□□□□ 0.2
PTPN12-216ENST00000523952 RAPGEF2Q9Y4G8 1499 aa16.24■□□□□ 0.19
PTPN12-216ENST00000523952 CD109Q6YHK3 1445 aa16.24■□□□□ 0.19
PTPN12-216ENST00000523952 KCNH8Q96L42 1107 aa16.23■□□□□ 0.19
PTPN12-216ENST00000523952 FBXO41Q8TF61 875 aa16.22■□□□□ 0.19
PTPN12-216ENST00000523952 MAGI3Q5TCQ9 1506 aa16.22■□□□□ 0.19
PTPN12-216ENST00000523952 GOLGA3Q08378 1498 aa16.19■□□□□ 0.18
PTPN12-216ENST00000523952 FAM9AQ8IZU1 332 aaPredicted RBP16.16■□□□□ 0.18
PTPN12-216ENST00000523952 ABCA8O94911 1581 aa16.16■□□□□ 0.18
PTPN12-216ENST00000523952 ADAMTSL3P82987 1691 aa16.14■□□□□ 0.18
PTPN12-216ENST00000523952 BCORL1Q5H9F3 1711 aa16.12■□□□□ 0.17
PTPN12-216ENST00000523952 ARAP3Q8WWN8 1544 aa16.11■□□□□ 0.17
PTPN12-216ENST00000523952 PTPRMP28827 1452 aa16.1■□□□□ 0.17
PTPN12-216ENST00000523952 MADDQ8WXG6 1647 aa16.09■□□□□ 0.17
PTPN12-216ENST00000523952 RIMS1Q86UR5 1692 aaKnown RBP16.09■□□□□ 0.17
PTPN12-216ENST00000523952 ABCA9Q8IUA7 1624 aa16.08■□□□□ 0.17
PTPN12-216ENST00000523952 PCF11O94913 1555 aaKnown RBP16.07■□□□□ 0.16
PTPN12-216ENST00000523952 ARID4BQ4LE39 1312 aaPredicted RBP16.06■□□□□ 0.16
PTPN12-216ENST00000523952 ARID3CA6NKF2 412 aa16.05■□□□□ 0.16
PTPN12-216ENST00000523952 PHLDB1Q86UU1 1377 aa16.04■□□□□ 0.16
PTPN12-216ENST00000523952 RAPGEF6Q8TEU7 1601 aa16.01■□□□□ 0.15
PTPN12-216ENST00000523952 NEO1Q92859 1461 aa16■□□□□ 0.15
PTPN12-216ENST00000523952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.99■□□□□ 0.15
PTPN12-216ENST00000523952 RAPGEF3O95398 923 aa15.99■□□□□ 0.15
PTPN12-216ENST00000523952 HNRNPUL2Q1KMD3 747 aaKnown RBP15.99■□□□□ 0.15
PTPN12-216ENST00000523952 CFAP74Q9C0B2 1584 aa15.99■□□□□ 0.15
PTPN12-216ENST00000523952 ATP10BO94823 1461 aa15.98■□□□□ 0.15
PTPN12-216ENST00000523952 LMTK3Q96Q04 1460 aa15.98■□□□□ 0.15
PTPN12-216ENST00000523952 FER1L4A9Z1Z3 1794 aa15.98■□□□□ 0.15
PTPN12-216ENST00000523952 FRMPD1Q5SYB0 1578 aa15.98■□□□□ 0.15
PTPN12-216ENST00000523952 RICTORQ6R327 1708 aa15.98■□□□□ 0.15
PTPN12-216ENST00000523952 P3H3Q8IVL6 736 aa15.97■□□□□ 0.15
PTPN12-216ENST00000523952 ARHGEF40Q8TER5 1519 aa15.97■□□□□ 0.15
PTPN12-216ENST00000523952 POGZQ7Z3K3 1410 aa15.92■□□□□ 0.14
PTPN12-216ENST00000523952 SAMD9Q5K651 1589 aa15.92■□□□□ 0.14
PTPN12-216ENST00000523952 FANCAO15360 1455 aa15.91■□□□□ 0.14
PTPN12-216ENST00000523952 PRXQ9BXM0 1461 aa15.9■□□□□ 0.14
PTPN12-216ENST00000523952 PREX1Q8TCU6 1659 aa15.89■□□□□ 0.13
PTPN12-216ENST00000523952 DENND4BO75064 1496 aaPredicted RBP15.89■□□□□ 0.13
PTPN12-216ENST00000523952 HSPA2P54652 639 aa15.88■□□□□ 0.13
PTPN12-216ENST00000523952 EFCAB5A4FU69 1503 aa15.88■□□□□ 0.13
PTPN12-216ENST00000523952 AKNAQ7Z591 1439 aa15.86■□□□□ 0.13
PTPN12-216ENST00000523952 ZFYVE16Q7Z3T8 1539 aa15.86■□□□□ 0.13
PTPN12-216ENST00000523952 CERKQ8TCT0 537 aa15.85■□□□□ 0.13
PTPN12-216ENST00000523952 SIGLEC1Q9BZZ2 1709 aa15.85■□□□□ 0.13
PTPN12-216ENST00000523952 ZMYM4Q5VZL5 1548 aa15.84■□□□□ 0.13
PTPN12-216ENST00000523952 TTC37Q6PGP7 1564 aa15.83■□□□□ 0.13
PTPN12-216ENST00000523952 PLEKHD1A6NEE1 506 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms