RNA–Protein interactions for RNA: ENST00000523200.5

TNIP1-217, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene TNIP1, Length 1,743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-217ENST00000523200 ADAMTS12P58397 1594 aa24.57■■□□□ 1.52
TNIP1-217ENST00000523200 CTTNBP2Q8WZ74 1663 aa24.57■■□□□ 1.52
TNIP1-217ENST00000523200 APLP2Q06481 763 aa24.55■■□□□ 1.52
TNIP1-217ENST00000523200 SNAPC4Q5SXM2 1469 aa24.49■■□□□ 1.51
TNIP1-217ENST00000523200 EFCAB5A4FU69 1503 aa24.48■■□□□ 1.51
TNIP1-217ENST00000523200 MAGI1Q96QZ7 1491 aaPredicted RBP24.47■■□□□ 1.51
TNIP1-217ENST00000523200 TTBK1Q5TCY1 1321 aaPredicted RBP24.38■■□□□ 1.49
TNIP1-217ENST00000523200 SYNJ2O15056 1496 aa24.37■■□□□ 1.49
TNIP1-217ENST00000523200 GRIN2AQ12879 1464 aa24.37■■□□□ 1.49
TNIP1-217ENST00000523200 P3H3Q8IVL6 736 aa24.37■■□□□ 1.49
TNIP1-217ENST00000523200 CHMP7Q8WUX9 453 aaPredicted RBP24.36■■□□□ 1.49
TNIP1-217ENST00000523200 IQGAP2Q13576 1575 aa24.35■■□□□ 1.49
TNIP1-217ENST00000523200 FHOD3Q2V2M9 1422 aa24.34■■□□□ 1.49
TNIP1-217ENST00000523200 SAMD9Q5K651 1589 aa24.33■■□□□ 1.49
TNIP1-217ENST00000523200 KIAA0586Q9BVV6 1533 aa24.3■■□□□ 1.48
TNIP1-217ENST00000523200 FMN1Q68DA7 1419 aa24.3■■□□□ 1.48
TNIP1-217ENST00000523200 FBLN2P98095 1184 aa24.27■■□□□ 1.48
TNIP1-217ENST00000523200 MAP3K1Q13233 1512 aa24.26■■□□□ 1.47
TNIP1-217ENST00000523200 UGGT2Q9NYU1 1516 aa24.23■■□□□ 1.47
TNIP1-217ENST00000523200 CASKIN1Q8WXD9 1431 aa24.22■■□□□ 1.47
TNIP1-217ENST00000523200 FYCO1Q9BQS8 1478 aa24.22■■□□□ 1.47
TNIP1-217ENST00000523200 PCF11O94913 1555 aaKnown RBP24.21■■□□□ 1.47
TNIP1-217ENST00000523200 KANK4Q5T7N3 995 aaPredicted RBP24.21■■□□□ 1.47
TNIP1-217ENST00000523200 NUP160Q12769 1436 aa24.19■■□□□ 1.46
TNIP1-217ENST00000523200 TIAM1Q13009 1591 aa24.19■■□□□ 1.46
TNIP1-217ENST00000523200 CEP170Q5SW79 1584 aa24.18■■□□□ 1.46
TNIP1-217ENST00000523200 ATP1B4Q9UN42 357 aaPredicted RBP24.17■■□□□ 1.46
TNIP1-217ENST00000523200 CFAP43Q8NDM7 1665 aa24.1■■□□□ 1.45
TNIP1-217ENST00000523200 HRCP23327 699 aa24.1■■□□□ 1.45
TNIP1-217ENST00000523200 LRRC9Q6ZRR7 1453 aa24.09■■□□□ 1.45
TNIP1-217ENST00000523200 DISP1Q96F81 1524 aa24.09■■□□□ 1.45
TNIP1-217ENST00000523200 KIAA0556O60303 1618 aa24.08■■□□□ 1.45
TNIP1-217ENST00000523200 JPH4Q96JJ6 628 aa24.06■■□□□ 1.44
TNIP1-217ENST00000523200 CARMIL2Q6F5E8 1435 aa24.03■■□□□ 1.44
TNIP1-217ENST00000523200 CHD1O14646 1710 aa24.01■■□□□ 1.43
TNIP1-217ENST00000523200 HECW1Q76N89 1606 aa23.99■■□□□ 1.43
TNIP1-217ENST00000523200 CCDC18Q5T9S5 1454 aa23.98■■□□□ 1.43
TNIP1-217ENST00000523200 RRBP1Q9P2E9 1410 aaKnown RBP23.97■■□□□ 1.43
TNIP1-217ENST00000523200 MTUS2Q5JR59 1369 aa23.93■■□□□ 1.42
TNIP1-217ENST00000523200 LRRIQ1Q96JM4 1722 aa23.92■■□□□ 1.42
TNIP1-217ENST00000523200 CCNB3Q8WWL7 1395 aa23.91■■□□□ 1.42
TNIP1-217ENST00000523200 EPRSP07814 1512 aaKnown RBP23.9■■□□□ 1.42
TNIP1-217ENST00000523200 HNRNPUL2Q1KMD3 747 aaKnown RBP23.9■■□□□ 1.42
TNIP1-217ENST00000523200 PRG4Q92954 1404 aaPredicted RBP23.87■■□□□ 1.41
TNIP1-217ENST00000523200 PHLDB1Q86UU1 1377 aa23.86■■□□□ 1.41
TNIP1-217ENST00000523200 RAPGEF6Q8TEU7 1601 aa23.86■■□□□ 1.41
TNIP1-217ENST00000523200 EHBP1L1Q8N3D4 1523 aa23.85■■□□□ 1.41
TNIP1-217ENST00000523200 ZEB1P37275 1124 aaPredicted RBP23.85■■□□□ 1.41
TNIP1-217ENST00000523200 NUP153P49790 1475 aaKnown RBP23.81■■□□□ 1.4
TNIP1-217ENST00000523200 SHROOM2Q13796 1616 aa23.81■■□□□ 1.4
TNIP1-217ENST00000523200 CDK13Q14004 1512 aaKnown RBP23.8■■□□□ 1.4
TNIP1-217ENST00000523200 SUPT6HQ7KZ85 1726 aaKnown RBP23.79■■□□□ 1.4
TNIP1-217ENST00000523200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.79■■□□□ 1.4
TNIP1-217ENST00000523200 PLB1Q6P1J6 1458 aa23.78■■□□□ 1.4
TNIP1-217ENST00000523200 CDK11AQ9UQ88 783 aaPredicted RBP23.78■■□□□ 1.4
TNIP1-217ENST00000523200 NCOA2Q15596 1464 aa23.77■■□□□ 1.4
TNIP1-217ENST00000523200 CCER1Q8TC90 406 aaPredicted RBP23.76■■□□□ 1.39
TNIP1-217ENST00000523200 ARID3CA6NKF2 412 aa23.76■■□□□ 1.39
TNIP1-217ENST00000523200 PTPRGP23470 1445 aa23.75■■□□□ 1.39
TNIP1-217ENST00000523200 MAGI3Q5TCQ9 1506 aa23.75■■□□□ 1.39
TNIP1-217ENST00000523200 CLASP1Q7Z460 1538 aa23.75■■□□□ 1.39
TNIP1-217ENST00000523200 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.73■■□□□ 1.39
TNIP1-217ENST00000523200 ABCA8O94911 1581 aa23.72■■□□□ 1.39
TNIP1-217ENST00000523200 FAM50AQ14320 339 aaKnown RBP23.71■■□□□ 1.39
TNIP1-217ENST00000523200 ARHGEF11O15085 1522 aa23.71■■□□□ 1.39
TNIP1-217ENST00000523200 MYOM3Q5VTT5 1437 aa23.7■■□□□ 1.38
TNIP1-217ENST00000523200 FGD6Q6ZV73 1430 aa23.7■■□□□ 1.38
TNIP1-217ENST00000523200 ITGAEP38570 1179 aa23.66■■□□□ 1.38
TNIP1-217ENST00000523200 TROQ12816 1431 aaPredicted RBP23.62■■□□□ 1.37
TNIP1-217ENST00000523200 UACAQ9BZF9 1416 aa23.62■■□□□ 1.37
TNIP1-217ENST00000523200 ERCC6L2Q5T890 1561 aa23.6■■□□□ 1.37
TNIP1-217ENST00000523200 ATP10BO94823 1461 aa23.59■■□□□ 1.37
TNIP1-217ENST00000523200 PLEKHD1A6NEE1 506 aa23.59■■□□□ 1.37
TNIP1-217ENST00000523200 MIA2Q96PC5 1412 aa23.58■■□□□ 1.37
TNIP1-217ENST00000523200 OSCARQ8IYS5 282 aa23.58■■□□□ 1.37
TNIP1-217ENST00000523200 PTPN23Q9H3S7 1636 aa23.55■■□□□ 1.36
TNIP1-217ENST00000523200 TCOF1Q13428 1488 aaKnown RBP23.52■■□□□ 1.36
TNIP1-217ENST00000523200 ABCC2Q92887 1545 aa23.51■■□□□ 1.35
TNIP1-217ENST00000523200 ADCY10Q96PN6 1610 aa23.51■■□□□ 1.35
TNIP1-217ENST00000523200 SETD5Q9C0A6 1442 aa23.49■■□□□ 1.35
TNIP1-217ENST00000523200 UHRF1BP1LA0JNW5 1464 aa23.46■■□□□ 1.35
TNIP1-217ENST00000523200 RAB3GAP2Q9H2M9 1393 aa23.45■■□□□ 1.35
TNIP1-217ENST00000523200 KIF14Q15058 1648 aa23.45■■□□□ 1.34
TNIP1-217ENST00000523200 ITSN2Q9NZM3 1697 aa23.43■■□□□ 1.34
TNIP1-217ENST00000523200 CLSPNQ9HAW4 1339 aa23.42■■□□□ 1.34
TNIP1-217ENST00000523200 GPATCH8Q9UKJ3 1502 aaKnown RBP23.41■■□□□ 1.34
TNIP1-217ENST00000523200 CFDP1Q9UEE9 299 aaPredicted RBP23.41■■□□□ 1.34
TNIP1-217ENST00000523200 DHX57Q6P158 1386 aaKnown RBP23.41■■□□□ 1.34
TNIP1-217ENST00000523200 PTPRKQ15262 1439 aa23.4■■□□□ 1.34
TNIP1-217ENST00000523200 ABCC10Q5T3U5 1492 aa23.38■■□□□ 1.33
TNIP1-217ENST00000523200 KDM5BQ9UGL1 1544 aa23.37■■□□□ 1.33
TNIP1-217ENST00000523200 HFM1A2PYH4 1435 aa23.36■■□□□ 1.33
TNIP1-217ENST00000523200 ZCCHC11Q5TAX3 1644 aaKnown RBP23.32■■□□□ 1.32
TNIP1-217ENST00000523200 ZNF644Q9H582 1327 aaPredicted RBP23.31■■□□□ 1.32
TNIP1-217ENST00000523200 CAMSAP2Q08AD1 1489 aa23.31■■□□□ 1.32
TNIP1-217ENST00000523200 DAPK1P53355 1430 aa23.31■■□□□ 1.32
TNIP1-217ENST00000523200 CDC42BPAQ5VT25 1732 aa23.3■■□□□ 1.32
TNIP1-217ENST00000523200 AKNAQ7Z591 1439 aa23.3■■□□□ 1.32
TNIP1-217ENST00000523200 DNMT1P26358 1616 aaKnown RBP23.3■■□□□ 1.32
TNIP1-217ENST00000523200 NAIPQ13075 1403 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms