RNA–Protein interactions for RNA: ENST00000523200.5

TNIP1-217, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene TNIP1, Length 1,743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-217ENST00000523200 NISCHQ9Y2I1 1504 aa35.51■■■■□ 3.27
TNIP1-217ENST00000523200 CCDC180Q9P1Z9 1646 aa30.9■■■□□ 2.54
TNIP1-217ENST00000523200 ZCCHC6Q5VYS8 1495 aaKnown RBP29.84■■■□□ 2.37
TNIP1-217ENST00000523200 DCAF1Q9Y4B6 1507 aa29.38■■■□□ 2.29
TNIP1-217ENST00000523200 DCAF8L2P0C7V8 631 aa29.37■■■□□ 2.29
TNIP1-217ENST00000523200 ABCC9O60706 1549 aa29.16■■■□□ 2.26
TNIP1-217ENST00000523200 SHROOM4Q9ULL8 1493 aa29.02■■■□□ 2.24
TNIP1-217ENST00000523200 MYO15BQ96JP2 1530 aa29.01■■■□□ 2.23
TNIP1-217ENST00000523200 NACADO15069 1562 aa28.8■■■□□ 2.2
TNIP1-217ENST00000523200 RB1CC1Q8TDY2 1594 aa28.53■■■□□ 2.16
TNIP1-217ENST00000523200 SCRIBQ14160 1630 aa28.42■■■□□ 2.14
TNIP1-217ENST00000523200 SUPT5HO00267 1087 aaKnown RBP28.01■■■□□ 2.07
TNIP1-217ENST00000523200 UNC13AQ9UPW8 1703 aa27.87■■■□□ 2.05
TNIP1-217ENST00000523200 BICRAQ9NZM4 1560 aa27.61■■■□□ 2.01
TNIP1-217ENST00000523200 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2.01
TNIP1-217ENST00000523200 CECR2Q9BXF3 1484 aa27.56■■■□□ 2
TNIP1-217ENST00000523200 PABPN1Q86U42 306 aaKnown RBP eCLIP27.54■■■□□ 2
TNIP1-217ENST00000523200 BAZ1AQ9NRL2 1556 aaPredicted RBP27.43■■□□□ 1.98
TNIP1-217ENST00000523200 MROH2BQ7Z745 1585 aa27.42■■□□□ 1.98
TNIP1-217ENST00000523200 SMARCA4P51532 1647 aa27.26■■□□□ 1.95
TNIP1-217ENST00000523200 WIZO95785 1651 aa27.18■■□□□ 1.94
TNIP1-217ENST00000523200 PEG3Q9GZU2 1588 aa26.93■■□□□ 1.9
TNIP1-217ENST00000523200 TOP2AP11388 1531 aaKnown RBP26.93■■□□□ 1.9
TNIP1-217ENST00000523200 CHIC1Q5VXU3 224 aa26.85■■□□□ 1.89
TNIP1-217ENST00000523200 SMARCA2P51531 1590 aa26.82■■□□□ 1.88
TNIP1-217ENST00000523200 ATAD2BQ9ULI0 1458 aa26.82■■□□□ 1.88
TNIP1-217ENST00000523200 EIF4G1Q04637 1599 aaKnown RBP26.81■■□□□ 1.88
TNIP1-217ENST00000523200 BAZ1BQ9UIG0 1483 aaKnown RBP26.69■■□□□ 1.86
TNIP1-217ENST00000523200 CCDC88BA6NC98 1476 aa26.66■■□□□ 1.86
TNIP1-217ENST00000523200 NCAPD3P42695 1498 aa26.59■■□□□ 1.85
TNIP1-217ENST00000523200 HMGXB3Q12766 1538 aa26.54■■□□□ 1.84
TNIP1-217ENST00000523200 CC2D2AQ9P2K1 1620 aa26.38■■□□□ 1.81
TNIP1-217ENST00000523200 TRIM41Q8WV44 630 aa26.36■■□□□ 1.81
TNIP1-217ENST00000523200 ABCC8Q09428 1581 aa26.1■■□□□ 1.77
TNIP1-217ENST00000523200 CFTRP13569 1480 aa26.02■■□□□ 1.76
TNIP1-217ENST00000523200 WRNQ14191 1432 aaPredicted RBP eCLIP25.98■■□□□ 1.75
TNIP1-217ENST00000523200 CADPSQ9ULU8 1353 aa25.93■■□□□ 1.74
TNIP1-217ENST00000523200 FAM9AQ8IZU1 332 aaPredicted RBP25.85■■□□□ 1.73
TNIP1-217ENST00000523200 PRDM2Q13029 1718 aa25.82■■□□□ 1.72
TNIP1-217ENST00000523200 SYNJ1O43426 1573 aa25.81■■□□□ 1.72
TNIP1-217ENST00000523200 LOC105371045A0A1W2PR82 267 aa25.81■■□□□ 1.72
TNIP1-217ENST00000523200 TOP2BQ02880 1626 aa25.73■■□□□ 1.71
TNIP1-217ENST00000523200 EEA1Q15075 1411 aa25.69■■□□□ 1.7
TNIP1-217ENST00000523200 BIVM-ERCC5R4GMW8 1640 aa25.69■■□□□ 1.7
TNIP1-217ENST00000523200 LAMC3Q9Y6N6 1575 aa25.66■■□□□ 1.7
TNIP1-217ENST00000523200 DNAJC5BQ9UF47 199 aa25.66■■□□□ 1.7
TNIP1-217ENST00000523200 SOGA1O94964 1423 aa25.65■■□□□ 1.7
TNIP1-217ENST00000523200 CUX1P39880 1505 aa25.63■■□□□ 1.69
TNIP1-217ENST00000523200 FANCD2Q9BXW9 1451 aa25.62■■□□□ 1.69
TNIP1-217ENST00000523200 NESP48681 1621 aa25.61■■□□□ 1.69
TNIP1-217ENST00000523200 CSRNP3Q8WYN3 585 aa25.54■■□□□ 1.68
TNIP1-217ENST00000523200 RUSC2Q8N2Y8 1516 aa25.53■■□□□ 1.68
TNIP1-217ENST00000523200 PDS5BQ9NTI5 1447 aa25.5■■□□□ 1.67
TNIP1-217ENST00000523200 EHMT2Q96KQ7 1210 aa25.46■■□□□ 1.67
TNIP1-217ENST00000523200 CEP164Q9UPV0 1460 aa25.45■■□□□ 1.67
TNIP1-217ENST00000523200 DNMBPQ6XZF7 1577 aa25.39■■□□□ 1.66
TNIP1-217ENST00000523200 FGD5Q6ZNL6 1462 aa25.36■■□□□ 1.65
TNIP1-217ENST00000523200 KIF27Q86VH2 1401 aa25.34■■□□□ 1.65
TNIP1-217ENST00000523200 TOPBP1Q92547 1522 aa25.34■■□□□ 1.65
TNIP1-217ENST00000523200 GOLGA3Q08378 1498 aa25.31■■□□□ 1.64
TNIP1-217ENST00000523200 KIF21BO75037 1637 aa25.29■■□□□ 1.64
TNIP1-217ENST00000523200 KIF21AQ7Z4S6 1674 aa25.28■■□□□ 1.64
TNIP1-217ENST00000523200 URB2Q14146 1524 aaKnown RBP25.26■■□□□ 1.63
TNIP1-217ENST00000523200 TNIKQ9UKE5 1360 aa25.26■■□□□ 1.63
TNIP1-217ENST00000523200 UBTFP17480 764 aaKnown RBP25.24■■□□□ 1.63
TNIP1-217ENST00000523200 CUX2O14529 1486 aa25.22■■□□□ 1.63
TNIP1-217ENST00000523200 POLA1P09884 1462 aaPredicted RBP25.22■■□□□ 1.63
TNIP1-217ENST00000523200 PRXQ9BXM0 1461 aa25.15■■□□□ 1.62
TNIP1-217ENST00000523200 ABCA10Q8WWZ4 1543 aa25.14■■□□□ 1.62
TNIP1-217ENST00000523200 RAD54L2Q9Y4B4 1467 aa25.13■■□□□ 1.61
TNIP1-217ENST00000523200 RAPGEF2Q9Y4G8 1499 aa25.13■■□□□ 1.61
TNIP1-217ENST00000523200 MRC2Q9UBG0 1479 aa25.13■■□□□ 1.61
TNIP1-217ENST00000523200 ERICH3Q5RHP9 1530 aa25.13■■□□□ 1.61
TNIP1-217ENST00000523200 CEP162Q5TB80 1403 aa25.1■■□□□ 1.61
TNIP1-217ENST00000523200 IGF1RP08069 1367 aa25.08■■□□□ 1.61
TNIP1-217ENST00000523200 ERCC6Q03468 1493 aa25.04■■□□□ 1.6
TNIP1-217ENST00000523200 WDR97A6NE52 1622 aa25■■□□□ 1.59
TNIP1-217ENST00000523200 CARMIL1Q5VZK9 1371 aa24.98■■□□□ 1.59
TNIP1-217ENST00000523200 WDR62O43379 1518 aa24.98■■□□□ 1.59
TNIP1-217ENST00000523200 TARBP1Q13395 1621 aaKnown RBP24.93■■□□□ 1.58
TNIP1-217ENST00000523200 CLIP1P30622 1438 aa24.91■■□□□ 1.58
TNIP1-217ENST00000523200 TDRD9Q8NDG6 1382 aaKnown RBP24.91■■□□□ 1.58
TNIP1-217ENST00000523200 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
TNIP1-217ENST00000523200 GAPVD1Q14C86 1478 aa24.89■■□□□ 1.58
TNIP1-217ENST00000523200 CUL7Q14999 1698 aa24.86■■□□□ 1.57
TNIP1-217ENST00000523200 IFT140Q96RY7 1462 aa24.85■■□□□ 1.57
TNIP1-217ENST00000523200 THOC2Q8NI27 1593 aaKnown RBP24.85■■□□□ 1.57
TNIP1-217ENST00000523200 RANGAP1P46060 587 aaPredicted RBP24.77■■□□□ 1.56
TNIP1-217ENST00000523200 TRIM26Q12899 539 aaPredicted RBP24.76■■□□□ 1.55
TNIP1-217ENST00000523200 PCGF6Q9BYE7 350 aa24.75■■□□□ 1.55
TNIP1-217ENST00000523200 AQRO60306 1485 aaKnown RBP eCLIP24.73■■□□□ 1.551e-6■■■■□ 26.5
TNIP1-217ENST00000523200 VPS8Q8N3P4 1428 aa24.7■■□□□ 1.54
TNIP1-217ENST00000523200 GRIN2BQ13224 1484 aa24.69■■□□□ 1.54
TNIP1-217ENST00000523200 PBRM1Q86U86 1689 aa24.68■■□□□ 1.54
TNIP1-217ENST00000523200 ZNF608Q9ULD9 1512 aaPredicted RBP24.67■■□□□ 1.54
TNIP1-217ENST00000523200 FHAD1B1AJZ9 1412 aa24.63■■□□□ 1.53
TNIP1-217ENST00000523200 ARAP1Q96P48 1450 aa24.6■■□□□ 1.53
TNIP1-217ENST00000523200 ARHGAP35Q9NRY4 1499 aa24.6■■□□□ 1.53
TNIP1-217ENST00000523200 PPARGC1BQ86YN6 1023 aaKnown RBP24.58■■□□□ 1.53
TNIP1-217ENST00000523200 EIF4G3O43432 1585 aaKnown RBP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms