RNA–Protein interactions for RNA: ENST00000522234.5

CDK16-217, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 1,679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-217ENST00000522234 EIF4G3O43432 1585 aaKnown RBP32.29■■■□□ 2.76
CDK16-217ENST00000522234 PPARGC1BQ86YN6 1023 aaKnown RBP32.26■■■□□ 2.75
CDK16-217ENST00000522234 EFCAB5A4FU69 1503 aa32.18■■■□□ 2.74
CDK16-217ENST00000522234 SNAPC4Q5SXM2 1469 aa32.13■■■□□ 2.73
CDK16-217ENST00000522234 APLP2Q06481 763 aa32.11■■■□□ 2.73
CDK16-217ENST00000522234 MAGI1Q96QZ7 1491 aaPredicted RBP32.09■■■□□ 2.73
CDK16-217ENST00000522234 SAMD9Q5K651 1589 aa32.01■■■□□ 2.72
CDK16-217ENST00000522234 TTBK1Q5TCY1 1321 aaPredicted RBP31.98■■■□□ 2.71
CDK16-217ENST00000522234 GRIN2AQ12879 1464 aa31.98■■■□□ 2.71
CDK16-217ENST00000522234 IQGAP2Q13576 1575 aa31.97■■■□□ 2.71
CDK16-217ENST00000522234 SYNJ2O15056 1496 aa31.96■■■□□ 2.71
CDK16-217ENST00000522234 FHOD3Q2V2M9 1422 aa31.96■■■□□ 2.71
CDK16-217ENST00000522234 P3H3Q8IVL6 736 aa31.91■■■□□ 2.7
CDK16-217ENST00000522234 MAP3K1Q13233 1512 aa31.88■■■□□ 2.69
CDK16-217ENST00000522234 PCF11O94913 1555 aaKnown RBP31.88■■■□□ 2.69
CDK16-217ENST00000522234 KIAA0586Q9BVV6 1533 aa31.87■■■□□ 2.69
CDK16-217ENST00000522234 FMN1Q68DA7 1419 aa31.86■■■□□ 2.69
CDK16-217ENST00000522234 FYCO1Q9BQS8 1478 aa31.84■■■□□ 2.69
CDK16-217ENST00000522234 CHMP7Q8WUX9 453 aaPredicted RBP31.83■■■□□ 2.69
CDK16-217ENST00000522234 UGGT2Q9NYU1 1516 aa31.83■■■□□ 2.69
CDK16-217ENST00000522234 TIAM1Q13009 1591 aa31.82■■■□□ 2.68
CDK16-217ENST00000522234 CASKIN1Q8WXD9 1431 aa31.81■■■□□ 2.68
CDK16-217ENST00000522234 CFAP43Q8NDM7 1665 aa31.77■■■□□ 2.68
CDK16-217ENST00000522234 CEP170Q5SW79 1584 aa31.77■■■□□ 2.68
CDK16-217ENST00000522234 KANK4Q5T7N3 995 aaPredicted RBP31.76■■■□□ 2.67
CDK16-217ENST00000522234 NUP160Q12769 1436 aa31.74■■■□□ 2.67
CDK16-217ENST00000522234 HRCP23327 699 aa31.73■■■□□ 2.67
CDK16-217ENST00000522234 FBLN2P98095 1184 aa31.7■■■□□ 2.66
CDK16-217ENST00000522234 LRRC9Q6ZRR7 1453 aa31.66■■■□□ 2.66
CDK16-217ENST00000522234 KIAA0556O60303 1618 aa31.65■■■□□ 2.66
CDK16-217ENST00000522234 DISP1Q96F81 1524 aa31.63■■■□□ 2.65
CDK16-217ENST00000522234 ATP1B4Q9UN42 357 aaPredicted RBP31.6■■■□□ 2.65
CDK16-217ENST00000522234 CHD1O14646 1710 aa31.56■■■□□ 2.64
CDK16-217ENST00000522234 LRRIQ1Q96JM4 1722 aa31.53■■■□□ 2.64
CDK16-217ENST00000522234 HECW1Q76N89 1606 aa31.53■■■□□ 2.64
CDK16-217ENST00000522234 RRBP1Q9P2E9 1410 aaKnown RBP31.51■■■□□ 2.64
CDK16-217ENST00000522234 CCDC18Q5T9S5 1454 aa31.49■■■□□ 2.63
CDK16-217ENST00000522234 CARMIL2Q6F5E8 1435 aa31.47■■■□□ 2.63
CDK16-217ENST00000522234 JPH4Q96JJ6 628 aa31.46■■■□□ 2.63
CDK16-217ENST00000522234 CCNB3Q8WWL7 1395 aa31.39■■■□□ 2.62
CDK16-217ENST00000522234 EPRSP07814 1512 aaKnown RBP31.37■■■□□ 2.61
CDK16-217ENST00000522234 MTUS2Q5JR59 1369 aa31.37■■■□□ 2.61
CDK16-217ENST00000522234 EHBP1L1Q8N3D4 1523 aa31.36■■■□□ 2.61
CDK16-217ENST00000522234 RAPGEF6Q8TEU7 1601 aa31.36■■■□□ 2.61
CDK16-217ENST00000522234 PHLDB1Q86UU1 1377 aa31.35■■■□□ 2.61
CDK16-217ENST00000522234 HNRNPUL2Q1KMD3 747 aaKnown RBP31.35■■■□□ 2.61
CDK16-217ENST00000522234 ZEB1P37275 1124 aaPredicted RBP31.32■■■□□ 2.6
CDK16-217ENST00000522234 SHROOM2Q13796 1616 aa31.3■■■□□ 2.6
CDK16-217ENST00000522234 SUPT6HQ7KZ85 1726 aaKnown RBP31.28■■■□□ 2.6
CDK16-217ENST00000522234 NUP153P49790 1475 aaKnown RBP31.27■■■□□ 2.6
CDK16-217ENST00000522234 CDK13Q14004 1512 aaKnown RBP31.27■■■□□ 2.6
CDK16-217ENST00000522234 PRG4Q92954 1404 aaPredicted RBP31.27■■■□□ 2.6
CDK16-217ENST00000522234 MAGI3Q5TCQ9 1506 aa31.25■■■□□ 2.59
CDK16-217ENST00000522234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.23■■■□□ 2.59
CDK16-217ENST00000522234 NCOA2Q15596 1464 aa31.22■■■□□ 2.59
CDK16-217ENST00000522234 PLB1Q6P1J6 1458 aa31.2■■■□□ 2.59
CDK16-217ENST00000522234 CLASP1Q7Z460 1538 aa31.2■■■□□ 2.58
CDK16-217ENST00000522234 CCER1Q8TC90 406 aaPredicted RBP31.19■■■□□ 2.58
CDK16-217ENST00000522234 ARHGEF11O15085 1522 aa31.18■■■□□ 2.58
CDK16-217ENST00000522234 ABCA8O94911 1581 aa31.17■■■□□ 2.58
CDK16-217ENST00000522234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.16■■■□□ 2.58
CDK16-217ENST00000522234 FGD6Q6ZV73 1430 aa31.14■■■□□ 2.58
CDK16-217ENST00000522234 MYOM3Q5VTT5 1437 aa31.12■■■□□ 2.57
CDK16-217ENST00000522234 PTPRGP23470 1445 aa31.1■■■□□ 2.57
CDK16-217ENST00000522234 ARID3CA6NKF2 412 aa31.1■■■□□ 2.57
CDK16-217ENST00000522234 CDK11AQ9UQ88 783 aaPredicted RBP31.08■■■□□ 2.57
CDK16-217ENST00000522234 FAM50AQ14320 339 aaKnown RBP31.06■■■□□ 2.56
CDK16-217ENST00000522234 ERCC6L2Q5T890 1561 aa31.01■■■□□ 2.55
CDK16-217ENST00000522234 ITGAEP38570 1179 aa31■■■□□ 2.55
CDK16-217ENST00000522234 TROQ12816 1431 aaPredicted RBP31■■■□□ 2.55
CDK16-217ENST00000522234 PTPN23Q9H3S7 1636 aa30.97■■■□□ 2.55
CDK16-217ENST00000522234 ATP10BO94823 1461 aa30.95■■■□□ 2.55
CDK16-217ENST00000522234 ADCY10Q96PN6 1610 aa30.95■■■□□ 2.55
CDK16-217ENST00000522234 MIA2Q96PC5 1412 aa30.94■■■□□ 2.54
CDK16-217ENST00000522234 UACAQ9BZF9 1416 aa30.94■■■□□ 2.54
CDK16-217ENST00000522234 TCOF1Q13428 1488 aaKnown RBP30.93■■■□□ 2.54
CDK16-217ENST00000522234 ABCC2Q92887 1545 aa30.86■■■□□ 2.53
CDK16-217ENST00000522234 SETD5Q9C0A6 1442 aa30.85■■■□□ 2.53
CDK16-217ENST00000522234 KIF14Q15058 1648 aa30.83■■■□□ 2.53
CDK16-217ENST00000522234 PLEKHD1A6NEE1 506 aa30.83■■■□□ 2.53
CDK16-217ENST00000522234 ITSN2Q9NZM3 1697 aa30.82■■■□□ 2.52
CDK16-217ENST00000522234 RAB3GAP2Q9H2M9 1393 aa30.81■■■□□ 2.52
CDK16-217ENST00000522234 DHX57Q6P158 1386 aaKnown RBP30.78■■■□□ 2.52
CDK16-217ENST00000522234 UHRF1BP1LA0JNW5 1464 aa30.77■■■□□ 2.52
CDK16-217ENST00000522234 OSCARQ8IYS5 282 aa30.76■■■□□ 2.51
CDK16-217ENST00000522234 PTPRKQ15262 1439 aa30.76■■■□□ 2.51
CDK16-217ENST00000522234 CLSPNQ9HAW4 1339 aa30.74■■■□□ 2.51
CDK16-217ENST00000522234 GPATCH8Q9UKJ3 1502 aaKnown RBP30.73■■■□□ 2.51
CDK16-217ENST00000522234 ABCC10Q5T3U5 1492 aa30.71■■■□□ 2.51
CDK16-217ENST00000522234 HFM1A2PYH4 1435 aa30.7■■■□□ 2.5
CDK16-217ENST00000522234 CDC42BPAQ5VT25 1732 aa30.66■■■□□ 2.5
CDK16-217ENST00000522234 DNMT1P26358 1616 aaKnown RBP30.64■■■□□ 2.5
CDK16-217ENST00000522234 KDM5BQ9UGL1 1544 aa30.64■■■□□ 2.5
CDK16-217ENST00000522234 ZCCHC11Q5TAX3 1644 aaKnown RBP30.64■■■□□ 2.5
CDK16-217ENST00000522234 CFDP1Q9UEE9 299 aaPredicted RBP30.64■■■□□ 2.5
CDK16-217ENST00000522234 AKNAQ7Z591 1439 aa30.63■■■□□ 2.49
CDK16-217ENST00000522234 CAMSAP2Q08AD1 1489 aa30.62■■■□□ 2.49
CDK16-217ENST00000522234 NAIPQ13075 1403 aa30.61■■■□□ 2.49
CDK16-217ENST00000522234 DAPK1P53355 1430 aa30.6■■■□□ 2.49
CDK16-217ENST00000522234 GCC2Q8IWJ2 1684 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms