RNA–Protein interactions for RNA: ENST00000519148.5

TOP1MT-208, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2 BASIC

Gene TOP1MT, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-208ENST00000519148 RANGAP1P46060 587 aaPredicted RBP38.32■■■■□ 3.72
TOP1MT-208ENST00000519148 ARHGAP35Q9NRY4 1499 aa38.26■■■■□ 3.72
TOP1MT-208ENST00000519148 ARAP1Q96P48 1450 aa38.24■■■■□ 3.71
TOP1MT-208ENST00000519148 SYNJ2O15056 1496 aa38.24■■■■□ 3.71
TOP1MT-208ENST00000519148 VPS8Q8N3P4 1428 aa38.22■■■■□ 3.71
TOP1MT-208ENST00000519148 GRIN2AQ12879 1464 aa38.21■■■■□ 3.71
TOP1MT-208ENST00000519148 EFCAB5A4FU69 1503 aa38.14■■■■□ 3.7
TOP1MT-208ENST00000519148 PPARGC1BQ86YN6 1023 aaKnown RBP38.11■■■■□ 3.69
TOP1MT-208ENST00000519148 IQGAP2Q13576 1575 aa38.09■■■■□ 3.69
TOP1MT-208ENST00000519148 CHMP7Q8WUX9 453 aaPredicted RBP38.06■■■■□ 3.68
TOP1MT-208ENST00000519148 SAMD9Q5K651 1589 aa38.03■■■■□ 3.68
TOP1MT-208ENST00000519148 KIAA0586Q9BVV6 1533 aa38.01■■■■□ 3.67
TOP1MT-208ENST00000519148 CEP170Q5SW79 1584 aa37.99■■■■□ 3.67
TOP1MT-208ENST00000519148 NUP160Q12769 1436 aa37.95■■■■□ 3.67
TOP1MT-208ENST00000519148 FBLN2P98095 1184 aa37.93■■■■□ 3.66
TOP1MT-208ENST00000519148 CHD1O14646 1710 aa37.92■■■■□ 3.66
TOP1MT-208ENST00000519148 UGGT2Q9NYU1 1516 aa37.91■■■■□ 3.66
TOP1MT-208ENST00000519148 FHOD3Q2V2M9 1422 aa37.89■■■■□ 3.66
TOP1MT-208ENST00000519148 ZEB1P37275 1124 aaPredicted RBP37.88■■■■□ 3.65
TOP1MT-208ENST00000519148 P3H3Q8IVL6 736 aa37.84■■■■□ 3.65
TOP1MT-208ENST00000519148 APLP2Q06481 763 aa37.75■■■■□ 3.63
TOP1MT-208ENST00000519148 FMN1Q68DA7 1419 aa37.75■■■■□ 3.63
TOP1MT-208ENST00000519148 PCF11O94913 1555 aaKnown RBP37.75■■■■□ 3.63
TOP1MT-208ENST00000519148 KIAA0556O60303 1618 aa37.71■■■■□ 3.63
TOP1MT-208ENST00000519148 DISP1Q96F81 1524 aa37.7■■■■□ 3.63
TOP1MT-208ENST00000519148 FYCO1Q9BQS8 1478 aa37.67■■■■□ 3.62
TOP1MT-208ENST00000519148 TTBK1Q5TCY1 1321 aaPredicted RBP37.66■■■■□ 3.62
TOP1MT-208ENST00000519148 CASKIN1Q8WXD9 1431 aa37.66■■■■□ 3.62
TOP1MT-208ENST00000519148 MAP3K1Q13233 1512 aa37.63■■■■□ 3.61
TOP1MT-208ENST00000519148 TIAM1Q13009 1591 aa37.58■■■■□ 3.61
TOP1MT-208ENST00000519148 JPH4Q96JJ6 628 aa37.57■■■■□ 3.6
TOP1MT-208ENST00000519148 CFAP43Q8NDM7 1665 aa37.56■■■■□ 3.6
TOP1MT-208ENST00000519148 CARMIL2Q6F5E8 1435 aa37.51■■■■□ 3.6
TOP1MT-208ENST00000519148 SHROOM2Q13796 1616 aa37.51■■■■□ 3.59
TOP1MT-208ENST00000519148 CLASP1Q7Z460 1538 aa37.47■■■■□ 3.59
TOP1MT-208ENST00000519148 LRRIQ1Q96JM4 1722 aa37.45■■■■□ 3.59
TOP1MT-208ENST00000519148 KANK4Q5T7N3 995 aaPredicted RBP37.44■■■■□ 3.58
TOP1MT-208ENST00000519148 HECW1Q76N89 1606 aa37.42■■■■□ 3.58
TOP1MT-208ENST00000519148 ATP1B4Q9UN42 357 aaPredicted RBP37.4■■■■□ 3.58
TOP1MT-208ENST00000519148 PRG4Q92954 1404 aaPredicted RBP37.38■■■■□ 3.57
TOP1MT-208ENST00000519148 LRRC9Q6ZRR7 1453 aa37.37■■■■□ 3.57
TOP1MT-208ENST00000519148 RAPGEF6Q8TEU7 1601 aa37.32■■■■□ 3.57
TOP1MT-208ENST00000519148 CCDC18Q5T9S5 1454 aa37.31■■■■□ 3.56
TOP1MT-208ENST00000519148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.31■■■■□ 3.56
TOP1MT-208ENST00000519148 CCER1Q8TC90 406 aaPredicted RBP37.28■■■■□ 3.56
TOP1MT-208ENST00000519148 EPRSP07814 1512 aaKnown RBP37.24■■■■□ 3.55
TOP1MT-208ENST00000519148 NUP153P49790 1475 aaKnown RBP37.2■■■■□ 3.54
TOP1MT-208ENST00000519148 PLB1Q6P1J6 1458 aa37.18■■■■□ 3.54
TOP1MT-208ENST00000519148 ABCA8O94911 1581 aa37.17■■■■□ 3.54
TOP1MT-208ENST00000519148 ERCC6L2Q5T890 1561 aa37.17■■■■□ 3.54
TOP1MT-208ENST00000519148 CDK13Q14004 1512 aaKnown RBP37.15■■■■□ 3.54
TOP1MT-208ENST00000519148 PTPRGP23470 1445 aa37.13■■■■□ 3.53
TOP1MT-208ENST00000519148 EHBP1L1Q8N3D4 1523 aa37.12■■■■□ 3.53
TOP1MT-208ENST00000519148 MTUS2Q5JR59 1369 aa37.11■■■■□ 3.53
TOP1MT-208ENST00000519148 MAGI3Q5TCQ9 1506 aa37.08■■■■□ 3.53
TOP1MT-208ENST00000519148 OSCARQ8IYS5 282 aa37.07■■■■□ 3.52
TOP1MT-208ENST00000519148 RRBP1Q9P2E9 1410 aaKnown RBP37.06■■■■□ 3.52
TOP1MT-208ENST00000519148 SUPT6HQ7KZ85 1726 aaKnown RBP37.03■■■■□ 3.52
TOP1MT-208ENST00000519148 PHLDB1Q86UU1 1377 aa36.99■■■■□ 3.51
TOP1MT-208ENST00000519148 HNRNPUL2Q1KMD3 747 aaKnown RBP36.98■■■■□ 3.51
TOP1MT-208ENST00000519148 ARID3CA6NKF2 412 aa36.96■■■■□ 3.51
TOP1MT-208ENST00000519148 UACAQ9BZF9 1416 aa36.94■■■■□ 3.5
TOP1MT-208ENST00000519148 NCOA2Q15596 1464 aa36.93■■■■□ 3.5
TOP1MT-208ENST00000519148 ARHGEF11O15085 1522 aa36.93■■■■□ 3.5
TOP1MT-208ENST00000519148 CCNB3Q8WWL7 1395 aa36.92■■■■□ 3.5
TOP1MT-208ENST00000519148 ABCC2Q92887 1545 aa36.87■■■■□ 3.49
TOP1MT-208ENST00000519148 ATP10BO94823 1461 aa36.87■■■■□ 3.49
TOP1MT-208ENST00000519148 CDK11AQ9UQ88 783 aaPredicted RBP36.87■■■■□ 3.49
TOP1MT-208ENST00000519148 TROQ12816 1431 aaPredicted RBP36.81■■■■□ 3.48
TOP1MT-208ENST00000519148 UHRF1BP1LA0JNW5 1464 aa36.79■■■■□ 3.48
TOP1MT-208ENST00000519148 MYOM3Q5VTT5 1437 aa36.79■■■■□ 3.48
TOP1MT-208ENST00000519148 ADCY10Q96PN6 1610 aa36.78■■■■□ 3.48
TOP1MT-208ENST00000519148 FGD6Q6ZV73 1430 aa36.77■■■■□ 3.48
TOP1MT-208ENST00000519148 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.71■■■■□ 3.47
TOP1MT-208ENST00000519148 KIF14Q15058 1648 aa36.67■■■■□ 3.46
TOP1MT-208ENST00000519148 PLEKHD1A6NEE1 506 aa36.66■■■■□ 3.46
TOP1MT-208ENST00000519148 ZCCHC11Q5TAX3 1644 aaKnown RBP36.64■■■■□ 3.46
TOP1MT-208ENST00000519148 KDM5BQ9UGL1 1544 aa36.64■■■■□ 3.46
TOP1MT-208ENST00000519148 PTPN23Q9H3S7 1636 aa36.62■■■■□ 3.45
TOP1MT-208ENST00000519148 MIA2Q96PC5 1412 aa36.6■■■■□ 3.45
TOP1MT-208ENST00000519148 FAM50AQ14320 339 aaKnown RBP36.6■■■■□ 3.45
TOP1MT-208ENST00000519148 ITSN2Q9NZM3 1697 aa36.57■■■■□ 3.45
TOP1MT-208ENST00000519148 TCOF1Q13428 1488 aaKnown RBP36.57■■■■□ 3.44
TOP1MT-208ENST00000519148 ABCC10Q5T3U5 1492 aa36.52■■■■□ 3.44
TOP1MT-208ENST00000519148 GPATCH8Q9UKJ3 1502 aaKnown RBP36.48■■■■□ 3.43
TOP1MT-208ENST00000519148 CDC42BPAQ5VT25 1732 aa36.47■■■■□ 3.43
TOP1MT-208ENST00000519148 ITGAEP38570 1179 aa36.47■■■■□ 3.43
TOP1MT-208ENST00000519148 CLSPNQ9HAW4 1339 aa36.45■■■■□ 3.43
TOP1MT-208ENST00000519148 DHX57Q6P158 1386 aaKnown RBP36.4■■■■□ 3.42
TOP1MT-208ENST00000519148 RIMBP3CA6NJZ7 1639 aa36.37■■■■□ 3.41
TOP1MT-208ENST00000519148 RIMBP3BA6NNM3 1639 aa36.37■■■■□ 3.41
TOP1MT-208ENST00000519148 RIMBP3Q9UFD9 1639 aa36.37■■■■□ 3.41
TOP1MT-208ENST00000519148 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.35■■■■□ 3.41
TOP1MT-208ENST00000519148 TTC37Q6PGP7 1564 aa36.34■■■■□ 3.41
TOP1MT-208ENST00000519148 PREX2Q70Z35 1606 aa36.33■■■■□ 3.41
TOP1MT-208ENST00000519148 CFDP1Q9UEE9 299 aaPredicted RBP36.33■■■■□ 3.41
TOP1MT-208ENST00000519148 PTPRKQ15262 1439 aa36.31■■■■□ 3.4
TOP1MT-208ENST00000519148 CAMSAP2Q08AD1 1489 aa36.31■■■■□ 3.4
TOP1MT-208ENST00000519148 WDR7Q9Y4E6 1490 aa36.29■■■■□ 3.4
TOP1MT-208ENST00000519148 CDC42BPBQ9Y5S2 1711 aa36.29■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms