RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 EIF4G3O43432 1585 aaKnown RBP8.45□□□□□ -1.06
SCARNA20.4-201ENST00000516969 PPARGC1BQ86YN6 1023 aaKnown RBP8.45□□□□□ -1.06
SCARNA20.4-201ENST00000516969 EFCAB5A4FU69 1503 aa8.43□□□□□ -1.06
SCARNA20.4-201ENST00000516969 MAGI1Q96QZ7 1491 aaPredicted RBP8.42□□□□□ -1.06
SCARNA20.4-201ENST00000516969 SNAPC4Q5SXM2 1469 aa8.41□□□□□ -1.06
SCARNA20.4-201ENST00000516969 SAMD9Q5K651 1589 aa8.4□□□□□ -1.06
SCARNA20.4-201ENST00000516969 APLP2Q06481 763 aa8.4□□□□□ -1.06
SCARNA20.4-201ENST00000516969 MAP3K1Q13233 1512 aa8.39□□□□□ -1.07
SCARNA20.4-201ENST00000516969 SYNJ2O15056 1496 aa8.38□□□□□ -1.07
SCARNA20.4-201ENST00000516969 GRIN2AQ12879 1464 aa8.38□□□□□ -1.07
SCARNA20.4-201ENST00000516969 IQGAP2Q13576 1575 aa8.38□□□□□ -1.07
SCARNA20.4-201ENST00000516969 KIAA0586Q9BVV6 1533 aa8.37□□□□□ -1.07
SCARNA20.4-201ENST00000516969 FHOD3Q2V2M9 1422 aa8.37□□□□□ -1.07
SCARNA20.4-201ENST00000516969 UGGT2Q9NYU1 1516 aa8.36□□□□□ -1.07
SCARNA20.4-201ENST00000516969 KANK4Q5T7N3 995 aaPredicted RBP8.36□□□□□ -1.07
SCARNA20.4-201ENST00000516969 P3H3Q8IVL6 736 aa8.36□□□□□ -1.07
SCARNA20.4-201ENST00000516969 FMN1Q68DA7 1419 aa8.36□□□□□ -1.07
SCARNA20.4-201ENST00000516969 CASKIN1Q8WXD9 1431 aa8.36□□□□□ -1.07
SCARNA20.4-201ENST00000516969 HRCP23327 699 aa8.35□□□□□ -1.07
SCARNA20.4-201ENST00000516969 PCF11O94913 1555 aaKnown RBP8.35□□□□□ -1.07
SCARNA20.4-201ENST00000516969 FYCO1Q9BQS8 1478 aa8.34□□□□□ -1.07
SCARNA20.4-201ENST00000516969 CHMP7Q8WUX9 453 aaPredicted RBP8.34□□□□□ -1.07
SCARNA20.4-201ENST00000516969 NUP160Q12769 1436 aa8.34□□□□□ -1.07
SCARNA20.4-201ENST00000516969 TIAM1Q13009 1591 aa8.34□□□□□ -1.07
SCARNA20.4-201ENST00000516969 CEP170Q5SW79 1584 aa8.34□□□□□ -1.07
SCARNA20.4-201ENST00000516969 TTBK1Q5TCY1 1321 aaPredicted RBP8.33□□□□□ -1.08
SCARNA20.4-201ENST00000516969 CFAP43Q8NDM7 1665 aa8.33□□□□□ -1.08
SCARNA20.4-201ENST00000516969 LRRIQ1Q96JM4 1722 aa8.32□□□□□ -1.08
SCARNA20.4-201ENST00000516969 DISP1Q96F81 1524 aa8.31□□□□□ -1.08
SCARNA20.4-201ENST00000516969 LRRC9Q6ZRR7 1453 aa8.31□□□□□ -1.08
SCARNA20.4-201ENST00000516969 KIAA0556O60303 1618 aa8.29□□□□□ -1.08
SCARNA20.4-201ENST00000516969 FBLN2P98095 1184 aa8.29□□□□□ -1.08
SCARNA20.4-201ENST00000516969 CHD1O14646 1710 aa8.29□□□□□ -1.08
SCARNA20.4-201ENST00000516969 RRBP1Q9P2E9 1410 aaKnown RBP8.29□□□□□ -1.08
SCARNA20.4-201ENST00000516969 JPH4Q96JJ6 628 aa8.28□□□□□ -1.08
SCARNA20.4-201ENST00000516969 ATP1B4Q9UN42 357 aaPredicted RBP8.26□□□□□ -1.09
SCARNA20.4-201ENST00000516969 CCDC18Q5T9S5 1454 aa8.25□□□□□ -1.09
SCARNA20.4-201ENST00000516969 HECW1Q76N89 1606 aa8.25□□□□□ -1.09
SCARNA20.4-201ENST00000516969 CARMIL2Q6F5E8 1435 aa8.24□□□□□ -1.09
SCARNA20.4-201ENST00000516969 EPRSP07814 1512 aaKnown RBP8.24□□□□□ -1.09
SCARNA20.4-201ENST00000516969 PHLDB1Q86UU1 1377 aa8.23□□□□□ -1.09
SCARNA20.4-201ENST00000516969 CCNB3Q8WWL7 1395 aa8.23□□□□□ -1.09
SCARNA20.4-201ENST00000516969 SHROOM2Q13796 1616 aa8.23□□□□□ -1.09
SCARNA20.4-201ENST00000516969 ZEB1P37275 1124 aaPredicted RBP8.23□□□□□ -1.09
SCARNA20.4-201ENST00000516969 RAPGEF6Q8TEU7 1601 aa8.22□□□□□ -1.09
SCARNA20.4-201ENST00000516969 HNRNPUL2Q1KMD3 747 aaKnown RBP8.22□□□□□ -1.09
SCARNA20.4-201ENST00000516969 NUP153P49790 1475 aaKnown RBP8.21□□□□□ -1.09
SCARNA20.4-201ENST00000516969 ARHGEF11O15085 1522 aa8.21□□□□□ -1.1
SCARNA20.4-201ENST00000516969 MAGI3Q5TCQ9 1506 aa8.21□□□□□ -1.1
SCARNA20.4-201ENST00000516969 MTUS2Q5JR59 1369 aa8.21□□□□□ -1.1
SCARNA20.4-201ENST00000516969 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.21□□□□□ -1.1
SCARNA20.4-201ENST00000516969 SUPT6HQ7KZ85 1726 aaKnown RBP8.2□□□□□ -1.1
SCARNA20.4-201ENST00000516969 EHBP1L1Q8N3D4 1523 aa8.2□□□□□ -1.1
SCARNA20.4-201ENST00000516969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.2□□□□□ -1.1
SCARNA20.4-201ENST00000516969 PRG4Q92954 1404 aaPredicted RBP8.2□□□□□ -1.1
SCARNA20.4-201ENST00000516969 CLASP1Q7Z460 1538 aa8.19□□□□□ -1.1
SCARNA20.4-201ENST00000516969 ABCA8O94911 1581 aa8.19□□□□□ -1.1
SCARNA20.4-201ENST00000516969 NCOA2Q15596 1464 aa8.19□□□□□ -1.1
SCARNA20.4-201ENST00000516969 PLB1Q6P1J6 1458 aa8.19□□□□□ -1.1
SCARNA20.4-201ENST00000516969 CDK13Q14004 1512 aaKnown RBP8.19□□□□□ -1.1
SCARNA20.4-201ENST00000516969 CCER1Q8TC90 406 aaPredicted RBP8.17□□□□□ -1.1
SCARNA20.4-201ENST00000516969 FGD6Q6ZV73 1430 aa8.17□□□□□ -1.1
SCARNA20.4-201ENST00000516969 PTPRGP23470 1445 aa8.16□□□□□ -1.1
SCARNA20.4-201ENST00000516969 MYOM3Q5VTT5 1437 aa8.16□□□□□ -1.1
SCARNA20.4-201ENST00000516969 CDK11AQ9UQ88 783 aaPredicted RBP8.15□□□□□ -1.1
SCARNA20.4-201ENST00000516969 ERCC6L2Q5T890 1561 aa8.14□□□□□ -1.11
SCARNA20.4-201ENST00000516969 ATP10BO94823 1461 aa8.14□□□□□ -1.11
SCARNA20.4-201ENST00000516969 TCOF1Q13428 1488 aaKnown RBP8.13□□□□□ -1.11
SCARNA20.4-201ENST00000516969 TROQ12816 1431 aaPredicted RBP8.13□□□□□ -1.11
SCARNA20.4-201ENST00000516969 MIA2Q96PC5 1412 aa8.13□□□□□ -1.11
SCARNA20.4-201ENST00000516969 FAM50AQ14320 339 aaKnown RBP8.13□□□□□ -1.11
SCARNA20.4-201ENST00000516969 ADCY10Q96PN6 1610 aa8.13□□□□□ -1.11
SCARNA20.4-201ENST00000516969 PTPN23Q9H3S7 1636 aa8.13□□□□□ -1.11
SCARNA20.4-201ENST00000516969 ARID3CA6NKF2 412 aa8.12□□□□□ -1.11
SCARNA20.4-201ENST00000516969 UACAQ9BZF9 1416 aa8.12□□□□□ -1.11
SCARNA20.4-201ENST00000516969 SETD5Q9C0A6 1442 aa8.11□□□□□ -1.11
SCARNA20.4-201ENST00000516969 CLSPNQ9HAW4 1339 aa8.1□□□□□ -1.11
SCARNA20.4-201ENST00000516969 ITGAEP38570 1179 aa8.1□□□□□ -1.11
SCARNA20.4-201ENST00000516969 PTPRKQ15262 1439 aa8.1□□□□□ -1.11
SCARNA20.4-201ENST00000516969 UHRF1BP1LA0JNW5 1464 aa8.09□□□□□ -1.11
SCARNA20.4-201ENST00000516969 PLEKHD1A6NEE1 506 aa8.09□□□□□ -1.11
SCARNA20.4-201ENST00000516969 DHX57Q6P158 1386 aaKnown RBP8.09□□□□□ -1.12
SCARNA20.4-201ENST00000516969 RAB3GAP2Q9H2M9 1393 aa8.09□□□□□ -1.12
SCARNA20.4-201ENST00000516969 ABCC2Q92887 1545 aa8.08□□□□□ -1.12
SCARNA20.4-201ENST00000516969 KIF14Q15058 1648 aa8.08□□□□□ -1.12
SCARNA20.4-201ENST00000516969 OSCARQ8IYS5 282 aa8.08□□□□□ -1.12
SCARNA20.4-201ENST00000516969 GPATCH8Q9UKJ3 1502 aaKnown RBP8.08□□□□□ -1.12
SCARNA20.4-201ENST00000516969 ABCC10Q5T3U5 1492 aa8.07□□□□□ -1.12
SCARNA20.4-201ENST00000516969 CDC42BPAQ5VT25 1732 aa8.07□□□□□ -1.12
SCARNA20.4-201ENST00000516969 ITSN2Q9NZM3 1697 aa8.07□□□□□ -1.12
SCARNA20.4-201ENST00000516969 HFM1A2PYH4 1435 aa8.06□□□□□ -1.12
SCARNA20.4-201ENST00000516969 KDM5BQ9UGL1 1544 aa8.05□□□□□ -1.12
SCARNA20.4-201ENST00000516969 NAIPQ13075 1403 aa8.04□□□□□ -1.12
SCARNA20.4-201ENST00000516969 AKNAQ7Z591 1439 aa8.04□□□□□ -1.12
SCARNA20.4-201ENST00000516969 DNMT1P26358 1616 aaKnown RBP8.04□□□□□ -1.12
SCARNA20.4-201ENST00000516969 CFDP1Q9UEE9 299 aaPredicted RBP8.04□□□□□ -1.12
SCARNA20.4-201ENST00000516969 ZNF644Q9H582 1327 aaPredicted RBP8.03□□□□□ -1.12
SCARNA20.4-201ENST00000516969 ABCC5O15440 1437 aa8.03□□□□□ -1.12
SCARNA20.4-201ENST00000516969 ZCCHC11Q5TAX3 1644 aaKnown RBP8.03□□□□□ -1.12
SCARNA20.4-201ENST00000516969 ROCK1Q13464 1354 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 838 ms