RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 NISCHQ9Y2I1 1504 aa12.27□□□□□ -0.45
SCARNA20.4-201ENST00000516969 CCDC180Q9P1Z9 1646 aa10.68□□□□□ -0.7
SCARNA20.4-201ENST00000516969 ZCCHC6Q5VYS8 1495 aaKnown RBP10.3□□□□□ -0.76
SCARNA20.4-201ENST00000516969 DCAF1Q9Y4B6 1507 aa10.16□□□□□ -0.78
SCARNA20.4-201ENST00000516969 DCAF8L2P0C7V8 631 aa10.05□□□□□ -0.8
SCARNA20.4-201ENST00000516969 MYO15BQ96JP2 1530 aa10.03□□□□□ -0.8
SCARNA20.4-201ENST00000516969 ABCC9O60706 1549 aa10□□□□□ -0.81
SCARNA20.4-201ENST00000516969 SHROOM4Q9ULL8 1493 aa9.97□□□□□ -0.81
SCARNA20.4-201ENST00000516969 NACADO15069 1562 aa9.93□□□□□ -0.82
SCARNA20.4-201ENST00000516969 RB1CC1Q8TDY2 1594 aa9.81□□□□□ -0.84
SCARNA20.4-201ENST00000516969 SCRIBQ14160 1630 aa9.78□□□□□ -0.84
SCARNA20.4-201ENST00000516969 UNC13AQ9UPW8 1703 aa9.68□□□□□ -0.86
SCARNA20.4-201ENST00000516969 SUPT5HO00267 1087 aaKnown RBP9.62□□□□□ -0.87
SCARNA20.4-201ENST00000516969 BICRAQ9NZM4 1560 aa9.55□□□□□ -0.88
SCARNA20.4-201ENST00000516969 RSF1Q96T23 1441 aaPredicted RBP9.53□□□□□ -0.88
SCARNA20.4-201ENST00000516969 CECR2Q9BXF3 1484 aa9.52□□□□□ -0.89
SCARNA20.4-201ENST00000516969 MROH2BQ7Z745 1585 aa9.47□□□□□ -0.89
SCARNA20.4-201ENST00000516969 PABPN1Q86U42 306 aaKnown RBP eCLIP9.45□□□□□ -0.9
SCARNA20.4-201ENST00000516969 BAZ1AQ9NRL2 1556 aaPredicted RBP9.45□□□□□ -0.9
SCARNA20.4-201ENST00000516969 SMARCA4P51532 1647 aa9.41□□□□□ -0.9
SCARNA20.4-201ENST00000516969 WIZO95785 1651 aa9.39□□□□□ -0.91
SCARNA20.4-201ENST00000516969 PEG3Q9GZU2 1588 aa9.32□□□□□ -0.92
SCARNA20.4-201ENST00000516969 CHIC1Q5VXU3 224 aa9.29□□□□□ -0.92
SCARNA20.4-201ENST00000516969 TOP2AP11388 1531 aaKnown RBP9.29□□□□□ -0.92
SCARNA20.4-201ENST00000516969 ATAD2BQ9ULI0 1458 aa9.25□□□□□ -0.93
SCARNA20.4-201ENST00000516969 SMARCA2P51531 1590 aa9.24□□□□□ -0.93
SCARNA20.4-201ENST00000516969 EIF4G1Q04637 1599 aaKnown RBP9.23□□□□□ -0.93
SCARNA20.4-201ENST00000516969 CCDC88BA6NC98 1476 aa9.21□□□□□ -0.93
SCARNA20.4-201ENST00000516969 NCAPD3P42695 1498 aa9.17□□□□□ -0.94
SCARNA20.4-201ENST00000516969 BAZ1BQ9UIG0 1483 aaKnown RBP9.17□□□□□ -0.94
SCARNA20.4-201ENST00000516969 HMGXB3Q12766 1538 aa9.15□□□□□ -0.95
SCARNA20.4-201ENST00000516969 CC2D2AQ9P2K1 1620 aa9.09□□□□□ -0.95
SCARNA20.4-201ENST00000516969 TRIM41Q8WV44 630 aa9.07□□□□□ -0.96
SCARNA20.4-201ENST00000516969 ABCC8Q09428 1581 aa9□□□□□ -0.97
SCARNA20.4-201ENST00000516969 CFTRP13569 1480 aa8.97□□□□□ -0.97
SCARNA20.4-201ENST00000516969 PRDM2Q13029 1718 aa8.96□□□□□ -0.98
SCARNA20.4-201ENST00000516969 WRNQ14191 1432 aaPredicted RBP eCLIP8.95□□□□□ -0.98
SCARNA20.4-201ENST00000516969 LOC105371045A0A1W2PR82 267 aa8.93□□□□□ -0.98
SCARNA20.4-201ENST00000516969 CADPSQ9ULU8 1353 aa8.93□□□□□ -0.98
SCARNA20.4-201ENST00000516969 SYNJ1O43426 1573 aa8.91□□□□□ -0.98
SCARNA20.4-201ENST00000516969 TOP2BQ02880 1626 aa8.89□□□□□ -0.99
SCARNA20.4-201ENST00000516969 BIVM-ERCC5R4GMW8 1640 aa8.88□□□□□ -0.99
SCARNA20.4-201ENST00000516969 FAM9AQ8IZU1 332 aaPredicted RBP8.86□□□□□ -0.99
SCARNA20.4-201ENST00000516969 DNAJC5BQ9UF47 199 aa8.86□□□□□ -0.99
SCARNA20.4-201ENST00000516969 SOGA1O94964 1423 aa8.86□□□□□ -0.99
SCARNA20.4-201ENST00000516969 CUX1P39880 1505 aa8.85□□□□□ -0.99
SCARNA20.4-201ENST00000516969 EEA1Q15075 1411 aa8.85□□□□□ -0.99
SCARNA20.4-201ENST00000516969 LAMC3Q9Y6N6 1575 aa8.83□□□□□ -1
SCARNA20.4-201ENST00000516969 RUSC2Q8N2Y8 1516 aa8.82□□□□□ -1
SCARNA20.4-201ENST00000516969 NESP48681 1621 aa8.82□□□□□ -1
SCARNA20.4-201ENST00000516969 FANCD2Q9BXW9 1451 aa8.81□□□□□ -1
SCARNA20.4-201ENST00000516969 CSRNP3Q8WYN3 585 aa8.8□□□□□ -1
SCARNA20.4-201ENST00000516969 PDS5BQ9NTI5 1447 aa8.76□□□□□ -1.01
SCARNA20.4-201ENST00000516969 DNMBPQ6XZF7 1577 aa8.75□□□□□ -1.01
SCARNA20.4-201ENST00000516969 KIF21BO75037 1637 aa8.74□□□□□ -1.01
SCARNA20.4-201ENST00000516969 CEP164Q9UPV0 1460 aa8.74□□□□□ -1.01
SCARNA20.4-201ENST00000516969 TOPBP1Q92547 1522 aa8.73□□□□□ -1.01
SCARNA20.4-201ENST00000516969 TNIKQ9UKE5 1360 aa8.73□□□□□ -1.01
SCARNA20.4-201ENST00000516969 KIF21AQ7Z4S6 1674 aa8.72□□□□□ -1.01
SCARNA20.4-201ENST00000516969 FGD5Q6ZNL6 1462 aa8.72□□□□□ -1.01
SCARNA20.4-201ENST00000516969 KIF27Q86VH2 1401 aa8.71□□□□□ -1.01
SCARNA20.4-201ENST00000516969 GOLGA3Q08378 1498 aa8.71□□□□□ -1.01
SCARNA20.4-201ENST00000516969 URB2Q14146 1524 aaKnown RBP8.71□□□□□ -1.01
SCARNA20.4-201ENST00000516969 EHMT2Q96KQ7 1210 aa8.71□□□□□ -1.02
SCARNA20.4-201ENST00000516969 PRXQ9BXM0 1461 aa8.7□□□□□ -1.02
SCARNA20.4-201ENST00000516969 POLA1P09884 1462 aaPredicted RBP8.69□□□□□ -1.02
SCARNA20.4-201ENST00000516969 ABCA10Q8WWZ4 1543 aa8.68□□□□□ -1.02
SCARNA20.4-201ENST00000516969 CUX2O14529 1486 aa8.67□□□□□ -1.02
SCARNA20.4-201ENST00000516969 IGF1RP08069 1367 aa8.67□□□□□ -1.02
SCARNA20.4-201ENST00000516969 ERICH3Q5RHP9 1530 aa8.67□□□□□ -1.02
SCARNA20.4-201ENST00000516969 RAPGEF2Q9Y4G8 1499 aa8.67□□□□□ -1.02
SCARNA20.4-201ENST00000516969 UBTFP17480 764 aaKnown RBP8.66□□□□□ -1.02
SCARNA20.4-201ENST00000516969 RAD54L2Q9Y4B4 1467 aa8.65□□□□□ -1.02
SCARNA20.4-201ENST00000516969 CEP162Q5TB80 1403 aa8.65□□□□□ -1.02
SCARNA20.4-201ENST00000516969 WDR97A6NE52 1622 aa8.65□□□□□ -1.03
SCARNA20.4-201ENST00000516969 MRC2Q9UBG0 1479 aa8.64□□□□□ -1.03
SCARNA20.4-201ENST00000516969 TARBP1Q13395 1621 aaKnown RBP8.62□□□□□ -1.03
SCARNA20.4-201ENST00000516969 CARMIL1Q5VZK9 1371 aa8.61□□□□□ -1.03
SCARNA20.4-201ENST00000516969 WDR62O43379 1518 aa8.6□□□□□ -1.03
SCARNA20.4-201ENST00000516969 ABCA5Q8WWZ7 1642 aa8.59□□□□□ -1.03
SCARNA20.4-201ENST00000516969 CUL7Q14999 1698 aa8.58□□□□□ -1.04
SCARNA20.4-201ENST00000516969 CLIP1P30622 1438 aa8.57□□□□□ -1.04
SCARNA20.4-201ENST00000516969 GAPVD1Q14C86 1478 aa8.57□□□□□ -1.04
SCARNA20.4-201ENST00000516969 THOC2Q8NI27 1593 aaKnown RBP8.56□□□□□ -1.04
SCARNA20.4-201ENST00000516969 TDRD9Q8NDG6 1382 aaKnown RBP8.56□□□□□ -1.04
SCARNA20.4-201ENST00000516969 ERCC6Q03468 1493 aa8.56□□□□□ -1.04
SCARNA20.4-201ENST00000516969 TRIM26Q12899 539 aaPredicted RBP8.55□□□□□ -1.04
SCARNA20.4-201ENST00000516969 IFT140Q96RY7 1462 aa8.54□□□□□ -1.04
SCARNA20.4-201ENST00000516969 PCGF6Q9BYE7 350 aa8.53□□□□□ -1.04
SCARNA20.4-201ENST00000516969 PBRM1Q86U86 1689 aa8.52□□□□□ -1.05
SCARNA20.4-201ENST00000516969 VPS8Q8N3P4 1428 aa8.51□□□□□ -1.05
SCARNA20.4-201ENST00000516969 AQRO60306 1485 aaKnown RBP eCLIP8.51□□□□□ -1.05
SCARNA20.4-201ENST00000516969 ARAP1Q96P48 1450 aa8.5□□□□□ -1.05
SCARNA20.4-201ENST00000516969 ZNF608Q9ULD9 1512 aaPredicted RBP8.49□□□□□ -1.05
SCARNA20.4-201ENST00000516969 GRIN2BQ13224 1484 aa8.49□□□□□ -1.05
SCARNA20.4-201ENST00000516969 ARHGAP35Q9NRY4 1499 aa8.49□□□□□ -1.05
SCARNA20.4-201ENST00000516969 CTTNBP2Q8WZ74 1663 aa8.49□□□□□ -1.05
SCARNA20.4-201ENST00000516969 FHAD1B1AJZ9 1412 aa8.47□□□□□ -1.05
SCARNA20.4-201ENST00000516969 RANGAP1P46060 587 aaPredicted RBP8.47□□□□□ -1.05
SCARNA20.4-201ENST00000516969 ADAMTS12P58397 1594 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms