RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 CLIP1P30622 1438 aa14.42□□□□□ -0.1
SUB1-209ENST00000511615 EIF4G3O43432 1585 aaKnown RBP14.41□□□□□ -0.1
SUB1-209ENST00000511615 MAGI1Q96QZ7 1491 aaPredicted RBP14.41□□□□□ -0.1
SUB1-209ENST00000511615 SNAPC4Q5SXM2 1469 aa14.36□□□□□ -0.11
SUB1-209ENST00000511615 PBRM1Q86U86 1689 aa14.36□□□□□ -0.11
SUB1-209ENST00000511615 CCER1Q8TC90 406 aaPredicted RBP14.36□□□□□ -0.11
SUB1-209ENST00000511615 ADAMTS12P58397 1594 aa14.36□□□□□ -0.11
SUB1-209ENST00000511615 VPS8Q8N3P4 1428 aa14.36□□□□□ -0.11
SUB1-209ENST00000511615 APLP2Q06481 763 aa14.36□□□□□ -0.11
SUB1-209ENST00000511615 SYNJ2O15056 1496 aa14.35□□□□□ -0.11
SUB1-209ENST00000511615 CHMP7Q8WUX9 453 aaPredicted RBP14.33□□□□□ -0.12
SUB1-209ENST00000511615 GRIN2AQ12879 1464 aa14.3□□□□□ -0.12
SUB1-209ENST00000511615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.3□□□□□ -0.12
SUB1-209ENST00000511615 TTBK1Q5TCY1 1321 aaPredicted RBP14.29□□□□□ -0.12
SUB1-209ENST00000511615 NUP160Q12769 1436 aa14.27□□□□□ -0.13
SUB1-209ENST00000511615 KIAA0586Q9BVV6 1533 aa14.27□□□□□ -0.13
SUB1-209ENST00000511615 ARHGAP35Q9NRY4 1499 aa14.23□□□□□ -0.13
SUB1-209ENST00000511615 FBLN2P98095 1184 aa14.22□□□□□ -0.13
SUB1-209ENST00000511615 RANGAP1P46060 587 aaPredicted RBP14.19□□□□□ -0.14
SUB1-209ENST00000511615 JPH4Q96JJ6 628 aa14.18□□□□□ -0.14
SUB1-209ENST00000511615 ARAP1Q96P48 1450 aa14.18□□□□□ -0.14
SUB1-209ENST00000511615 EFCAB5A4FU69 1503 aa14.18□□□□□ -0.14
SUB1-209ENST00000511615 UGGT2Q9NYU1 1516 aa14.18□□□□□ -0.14
SUB1-209ENST00000511615 CTTNBP2Q8WZ74 1663 aa14.18□□□□□ -0.14
SUB1-209ENST00000511615 IQGAP2Q13576 1575 aa14.17□□□□□ -0.14
SUB1-209ENST00000511615 CEP170Q5SW79 1584 aa14.17□□□□□ -0.14
SUB1-209ENST00000511615 PLPPR3Q6T4P5 718 aa14.14□□□□□ -0.15
SUB1-209ENST00000511615 SAMD9Q5K651 1589 aa14.13□□□□□ -0.15
SUB1-209ENST00000511615 HNRNPUL2Q1KMD3 747 aaKnown RBP14.1□□□□□ -0.15
SUB1-209ENST00000511615 DISP1Q96F81 1524 aa14.1□□□□□ -0.15
SUB1-209ENST00000511615 FMN1Q68DA7 1419 aa14.09□□□□□ -0.15
SUB1-209ENST00000511615 P3H3Q8IVL6 736 aa14.08□□□□□ -0.16
SUB1-209ENST00000511615 OSCARQ8IYS5 282 aa14.08□□□□□ -0.16
SUB1-209ENST00000511615 CHD1O14646 1710 aa14.08□□□□□ -0.16
SUB1-209ENST00000511615 FHOD3Q2V2M9 1422 aa14.07□□□□□ -0.16
SUB1-209ENST00000511615 CARMIL2Q6F5E8 1435 aa14.06□□□□□ -0.16
SUB1-209ENST00000511615 CLASP1Q7Z460 1538 aa14.05□□□□□ -0.16
SUB1-209ENST00000511615 CASKIN1Q8WXD9 1431 aa14.04□□□□□ -0.16
SUB1-209ENST00000511615 POTEDQ86YR6 584 aa14.04□□□□□ -0.16
SUB1-209ENST00000511615 MAP3K1Q13233 1512 aa14.03□□□□□ -0.16
SUB1-209ENST00000511615 SHROOM2Q13796 1616 aa14.03□□□□□ -0.16
SUB1-209ENST00000511615 PRG4Q92954 1404 aaPredicted RBP14.02□□□□□ -0.16
SUB1-209ENST00000511615 KIAA0556O60303 1618 aa14.02□□□□□ -0.17
SUB1-209ENST00000511615 KANK4Q5T7N3 995 aaPredicted RBP14□□□□□ -0.17
SUB1-209ENST00000511615 CLSPNQ9HAW4 1339 aa14□□□□□ -0.17
SUB1-209ENST00000511615 RRBP1Q9P2E9 1410 aaKnown RBP14□□□□□ -0.17
SUB1-209ENST00000511615 FYCO1Q9BQS8 1478 aa14□□□□□ -0.17
SUB1-209ENST00000511615 PPP6R1Q9UPN7 881 aa13.98□□□□□ -0.17
SUB1-209ENST00000511615 ZNF316A6NFI3 1004 aaPredicted RBP13.98□□□□□ -0.17
SUB1-209ENST00000511615 DIEXFQ68CQ4 756 aaKnown RBP13.97□□□□□ -0.17
SUB1-209ENST00000511615 PTPRGP23470 1445 aa13.96□□□□□ -0.18
SUB1-209ENST00000511615 CCNB3Q8WWL7 1395 aa13.95□□□□□ -0.18
SUB1-209ENST00000511615 TIAM1Q13009 1591 aa13.92□□□□□ -0.18
SUB1-209ENST00000511615 PCF11O94913 1555 aaKnown RBP13.91□□□□□ -0.18
SUB1-209ENST00000511615 ADRA2BP18089 450 aa13.91□□□□□ -0.18
SUB1-209ENST00000511615 NUP153P49790 1475 aaKnown RBP13.88□□□□□ -0.19
SUB1-209ENST00000511615 CCDC18Q5T9S5 1454 aa13.88□□□□□ -0.19
SUB1-209ENST00000511615 PLB1Q6P1J6 1458 aa13.88□□□□□ -0.19
SUB1-209ENST00000511615 LRRC9Q6ZRR7 1453 aa13.88□□□□□ -0.19
SUB1-209ENST00000511615 ABCA8O94911 1581 aa13.88□□□□□ -0.19
SUB1-209ENST00000511615 EPRSP07814 1512 aaKnown RBP13.88□□□□□ -0.19
SUB1-209ENST00000511615 ERCC6L2Q5T890 1561 aa13.88□□□□□ -0.19
SUB1-209ENST00000511615 ATP1B4Q9UN42 357 aaPredicted RBP13.88□□□□□ -0.19
SUB1-209ENST00000511615 DHX57Q6P158 1386 aaKnown RBP13.87□□□□□ -0.19
SUB1-209ENST00000511615 UACAQ9BZF9 1416 aa13.87□□□□□ -0.19
SUB1-209ENST00000511615 UHRF1BP1LA0JNW5 1464 aa13.85□□□□□ -0.19
SUB1-209ENST00000511615 HECW1Q76N89 1606 aa13.85□□□□□ -0.19
SUB1-209ENST00000511615 RAPGEF6Q8TEU7 1601 aa13.85□□□□□ -0.19
SUB1-209ENST00000511615 PIAS4Q8N2W9 510 aaPredicted RBP13.84□□□□□ -0.19
SUB1-209ENST00000511615 CDK11AQ9UQ88 783 aaPredicted RBP13.84□□□□□ -0.19
SUB1-209ENST00000511615 ATP10BO94823 1461 aa13.82□□□□□ -0.2
SUB1-209ENST00000511615 CFAP43Q8NDM7 1665 aa13.82□□□□□ -0.2
SUB1-209ENST00000511615 CENPBP07199 599 aaPredicted RBP13.82□□□□□ -0.2
SUB1-209ENST00000511615 MTUS2Q5JR59 1369 aa13.8□□□□□ -0.2
SUB1-209ENST00000511615 ABCC2Q92887 1545 aa13.78□□□□□ -0.2
SUB1-209ENST00000511615 LRRIQ1Q96JM4 1722 aa13.78□□□□□ -0.2
SUB1-209ENST00000511615 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.78□□□□□ -0.2
SUB1-209ENST00000511615 PLEKHD1A6NEE1 506 aa13.78□□□□□ -0.2
SUB1-209ENST00000511615 ITGAEP38570 1179 aa13.78□□□□□ -0.2
SUB1-209ENST00000511615 MSH5O43196 834 aa13.77□□□□□ -0.21
SUB1-209ENST00000511615 CDK13Q14004 1512 aaKnown RBP13.77□□□□□ -0.21
SUB1-209ENST00000511615 KDM5BQ9UGL1 1544 aa13.77□□□□□ -0.21
SUB1-209ENST00000511615 SETD5Q9C0A6 1442 aa13.76□□□□□ -0.21
SUB1-209ENST00000511615 PHLDB1Q86UU1 1377 aa13.76□□□□□ -0.21
SUB1-209ENST00000511615 MAGI3Q5TCQ9 1506 aa13.76□□□□□ -0.21
SUB1-209ENST00000511615 TROQ12816 1431 aaPredicted RBP13.76□□□□□ -0.21
SUB1-209ENST00000511615 ARHGEF11O15085 1522 aa13.75□□□□□ -0.21
SUB1-209ENST00000511615 ACIN1Q9UKV3 1341 aaKnown RBP13.75□□□□□ -0.21
SUB1-209ENST00000511615 FAM50AQ14320 339 aaKnown RBP13.75□□□□□ -0.21
SUB1-209ENST00000511615 EHBP1L1Q8N3D4 1523 aa13.75□□□□□ -0.21
SUB1-209ENST00000511615 RAB3GAP2Q9H2M9 1393 aa13.74□□□□□ -0.21
SUB1-209ENST00000511615 ARID3CA6NKF2 412 aa13.72□□□□□ -0.21
SUB1-209ENST00000511615 NCOA2Q15596 1464 aa13.72□□□□□ -0.21
SUB1-209ENST00000511615 MYOM3Q5VTT5 1437 aa13.68□□□□□ -0.22
SUB1-209ENST00000511615 MIA2Q96PC5 1412 aa13.68□□□□□ -0.22
SUB1-209ENST00000511615 SCAF1Q9H7N4 1312 aaKnown RBP13.68□□□□□ -0.22
SUB1-209ENST00000511615 ADCY10Q96PN6 1610 aa13.67□□□□□ -0.22
SUB1-209ENST00000511615 SUPT6HQ7KZ85 1726 aaKnown RBP13.67□□□□□ -0.22
SUB1-209ENST00000511615 TIMELESSQ9UNS1 1208 aa13.66□□□□□ -0.22
SUB1-209ENST00000511615 FGD6Q6ZV73 1430 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms