RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 SAMD9Q5K651 1589 aa19.5■□□□□ 0.71
PRDM16-205ENST00000509860 HRCP23327 699 aa19.49■□□□□ 0.71
PRDM16-205ENST00000509860 GRIN2BQ13224 1484 aa19.47■□□□□ 0.71
PRDM16-205ENST00000509860 TTBK1Q5TCY1 1321 aaPredicted RBP19.47■□□□□ 0.71
PRDM16-205ENST00000509860 PELP1Q8IZL8 1130 aaKnown RBP19.45■□□□□ 0.7
PRDM16-205ENST00000509860 PCF11O94913 1555 aaKnown RBP19.45■□□□□ 0.7
PRDM16-205ENST00000509860 EFCAB5A4FU69 1503 aa19.44■□□□□ 0.7
PRDM16-205ENST00000509860 FHAD1B1AJZ9 1412 aa19.44■□□□□ 0.7
PRDM16-205ENST00000509860 LRRIQ1Q96JM4 1722 aa19.43■□□□□ 0.7
PRDM16-205ENST00000509860 SNAPC4Q5SXM2 1469 aa19.41■□□□□ 0.7
PRDM16-205ENST00000509860 FHOD3Q2V2M9 1422 aa19.4■□□□□ 0.7
PRDM16-205ENST00000509860 CFAP43Q8NDM7 1665 aa19.39■□□□□ 0.7
PRDM16-205ENST00000509860 KANK4Q5T7N3 995 aaPredicted RBP19.37■□□□□ 0.69
PRDM16-205ENST00000509860 TIAM1Q13009 1591 aa19.37■□□□□ 0.69
PRDM16-205ENST00000509860 IQGAP2Q13576 1575 aa19.34■□□□□ 0.69
PRDM16-205ENST00000509860 MAP3K1Q13233 1512 aa19.33■□□□□ 0.68
PRDM16-205ENST00000509860 CEP170Q5SW79 1584 aa19.31■□□□□ 0.68
PRDM16-205ENST00000509860 GRIN2AQ12879 1464 aa19.31■□□□□ 0.68
PRDM16-205ENST00000509860 P3H3Q8IVL6 736 aa19.3■□□□□ 0.68
PRDM16-205ENST00000509860 MAGI1Q96QZ7 1491 aaPredicted RBP19.3■□□□□ 0.68
PRDM16-205ENST00000509860 FYCO1Q9BQS8 1478 aa19.28■□□□□ 0.68
PRDM16-205ENST00000509860 UGGT2Q9NYU1 1516 aa19.26■□□□□ 0.67
PRDM16-205ENST00000509860 CASKIN1Q8WXD9 1431 aa19.26■□□□□ 0.67
PRDM16-205ENST00000509860 SYNJ2O15056 1496 aa19.24■□□□□ 0.67
PRDM16-205ENST00000509860 LRRC9Q6ZRR7 1453 aa19.23■□□□□ 0.67
PRDM16-205ENST00000509860 DISP1Q96F81 1524 aa19.22■□□□□ 0.67
PRDM16-205ENST00000509860 KIAA0556O60303 1618 aa19.2■□□□□ 0.66
PRDM16-205ENST00000509860 KIAA0586Q9BVV6 1533 aa19.2■□□□□ 0.66
PRDM16-205ENST00000509860 RRBP1Q9P2E9 1410 aaKnown RBP19.19■□□□□ 0.66
PRDM16-205ENST00000509860 FMN1Q68DA7 1419 aa19.17■□□□□ 0.66
PRDM16-205ENST00000509860 NUP160Q12769 1436 aa19.17■□□□□ 0.66
PRDM16-205ENST00000509860 APLP2Q06481 763 aa19.16■□□□□ 0.66
PRDM16-205ENST00000509860 CHD1O14646 1710 aa19.15■□□□□ 0.66
PRDM16-205ENST00000509860 MAGI3Q5TCQ9 1506 aa19.14■□□□□ 0.66
PRDM16-205ENST00000509860 PHLDB1Q86UU1 1377 aa19.11■□□□□ 0.65
PRDM16-205ENST00000509860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.1■□□□□ 0.65
PRDM16-205ENST00000509860 HECW1Q76N89 1606 aa19.07■□□□□ 0.64
PRDM16-205ENST00000509860 ARHGEF11O15085 1522 aa19.04■□□□□ 0.64
PRDM16-205ENST00000509860 CDK13Q14004 1512 aaKnown RBP19.03■□□□□ 0.64
PRDM16-205ENST00000509860 CHMP7Q8WUX9 453 aaPredicted RBP19.02■□□□□ 0.64
PRDM16-205ENST00000509860 CCNB3Q8WWL7 1395 aa19.02■□□□□ 0.64
PRDM16-205ENST00000509860 HNRNPUL2Q1KMD3 747 aaKnown RBP19.02■□□□□ 0.64
PRDM16-205ENST00000509860 EPRSP07814 1512 aaKnown RBP19.02■□□□□ 0.63
PRDM16-205ENST00000509860 RAPGEF6Q8TEU7 1601 aa19.01■□□□□ 0.63
PRDM16-205ENST00000509860 NUP153P49790 1475 aaKnown RBP18.99■□□□□ 0.63
PRDM16-205ENST00000509860 SHROOM2Q13796 1616 aa18.99■□□□□ 0.63
PRDM16-205ENST00000509860 EHBP1L1Q8N3D4 1523 aa18.98■□□□□ 0.63
PRDM16-205ENST00000509860 CCDC18Q5T9S5 1454 aa18.98■□□□□ 0.63
PRDM16-205ENST00000509860 SUPT6HQ7KZ85 1726 aaKnown RBP18.97■□□□□ 0.63
PRDM16-205ENST00000509860 MYT1Q01538 1121 aa18.97■□□□□ 0.63
PRDM16-205ENST00000509860 ATP1B4Q9UN42 357 aaPredicted RBP18.96■□□□□ 0.63
PRDM16-205ENST00000509860 FBLN2P98095 1184 aa18.96■□□□□ 0.63
PRDM16-205ENST00000509860 NCOA2Q15596 1464 aa18.94■□□□□ 0.62
PRDM16-205ENST00000509860 PLB1Q6P1J6 1458 aa18.92■□□□□ 0.62
PRDM16-205ENST00000509860 ABCA8O94911 1581 aa18.91■□□□□ 0.62
PRDM16-205ENST00000509860 ERCC6L2Q5T890 1561 aa18.9■□□□□ 0.62
PRDM16-205ENST00000509860 ZEB1P37275 1124 aaPredicted RBP18.89■□□□□ 0.62
PRDM16-205ENST00000509860 JPH4Q96JJ6 628 aa18.89■□□□□ 0.61
PRDM16-205ENST00000509860 CLASP1Q7Z460 1538 aa18.89■□□□□ 0.61
PRDM16-205ENST00000509860 CCER1Q8TC90 406 aaPredicted RBP18.89■□□□□ 0.61
PRDM16-205ENST00000509860 FGD6Q6ZV73 1430 aa18.89■□□□□ 0.61
PRDM16-205ENST00000509860 MTUS2Q5JR59 1369 aa18.87■□□□□ 0.61
PRDM16-205ENST00000509860 PTPN23Q9H3S7 1636 aa18.84■□□□□ 0.61
PRDM16-205ENST00000509860 MYOM3Q5VTT5 1437 aa18.84■□□□□ 0.61
PRDM16-205ENST00000509860 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.84■□□□□ 0.61
PRDM16-205ENST00000509860 PTPRKQ15262 1439 aa18.83■□□□□ 0.61
PRDM16-205ENST00000509860 ADCY10Q96PN6 1610 aa18.83■□□□□ 0.6
PRDM16-205ENST00000509860 PRG4Q92954 1404 aaPredicted RBP18.83■□□□□ 0.6
PRDM16-205ENST00000509860 KIF14Q15058 1648 aa18.81■□□□□ 0.6
PRDM16-205ENST00000509860 DHX57Q6P158 1386 aaKnown RBP18.81■□□□□ 0.6
PRDM16-205ENST00000509860 ARID3CA6NKF2 412 aa18.81■□□□□ 0.6
PRDM16-205ENST00000509860 CARMIL2Q6F5E8 1435 aa18.81■□□□□ 0.6
PRDM16-205ENST00000509860 TCOF1Q13428 1488 aaKnown RBP18.8■□□□□ 0.6
PRDM16-205ENST00000509860 ITGAEP38570 1179 aa18.75■□□□□ 0.59
PRDM16-205ENST00000509860 RAB3GAP2Q9H2M9 1393 aa18.75■□□□□ 0.59
PRDM16-205ENST00000509860 ATP10BO94823 1461 aa18.74■□□□□ 0.59
PRDM16-205ENST00000509860 MAPKBP1O60336 1514 aa18.73■□□□□ 0.59
PRDM16-205ENST00000509860 FAM50AQ14320 339 aaKnown RBP18.73■□□□□ 0.59
PRDM16-205ENST00000509860 TROQ12816 1431 aaPredicted RBP18.7■□□□□ 0.58
PRDM16-205ENST00000509860 CDC42BPAQ5VT25 1732 aa18.7■□□□□ 0.58
PRDM16-205ENST00000509860 SETD5Q9C0A6 1442 aa18.69■□□□□ 0.58
PRDM16-205ENST00000509860 GCC2Q8IWJ2 1684 aa18.68■□□□□ 0.58
PRDM16-205ENST00000509860 MIA2Q96PC5 1412 aa18.67■□□□□ 0.58
PRDM16-205ENST00000509860 KDM6BO15054 1643 aa18.67■□□□□ 0.58
PRDM16-205ENST00000509860 ABCC10Q5T3U5 1492 aa18.66■□□□□ 0.58
PRDM16-205ENST00000509860 PTPRGP23470 1445 aa18.66■□□□□ 0.58
PRDM16-205ENST00000509860 ITSN2Q9NZM3 1697 aa18.65■□□□□ 0.58
PRDM16-205ENST00000509860 DNMT1P26358 1616 aaKnown RBP18.64■□□□□ 0.58
PRDM16-205ENST00000509860 HFM1A2PYH4 1435 aa18.64■□□□□ 0.57
PRDM16-205ENST00000509860 GPATCH8Q9UKJ3 1502 aaKnown RBP18.63■□□□□ 0.57
PRDM16-205ENST00000509860 ABCC2Q92887 1545 aa18.62■□□□□ 0.57
PRDM16-205ENST00000509860 NAIPQ13075 1403 aa18.62■□□□□ 0.57
PRDM16-205ENST00000509860 CROCC2H7BZ55 1655 aa18.62■□□□□ 0.57
PRDM16-205ENST00000509860 UACAQ9BZF9 1416 aa18.61■□□□□ 0.57
PRDM16-205ENST00000509860 ZCCHC11Q5TAX3 1644 aaKnown RBP18.59■□□□□ 0.57
PRDM16-205ENST00000509860 ZNF644Q9H582 1327 aaPredicted RBP18.59■□□□□ 0.57
PRDM16-205ENST00000509860 CDC42BPBQ9Y5S2 1711 aa18.58■□□□□ 0.57
PRDM16-205ENST00000509860 CAMSAP2Q08AD1 1489 aa18.58■□□□□ 0.56
PRDM16-205ENST00000509860 DAPK1P53355 1430 aa18.56■□□□□ 0.56
PRDM16-205ENST00000509860 TTC37Q6PGP7 1564 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms