RNA–Protein interactions for RNA: ENST00000509682.6

KCNQ4-204, Transcript of potassium voltage-gated channel subfamily Q member 4, human

APPRIS ALT2 TSL 5 BASIC

Gene KCNQ4, Length 1,926 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNQ4-204	ENST00000509682	AQR	O60306	1485 aa	Known RBP eCLIP	34.17	■■■■□ 3.06	4e-7	■■■■■ 32.5
KCNQ4-204	ENST00000509682	GRIN2B	Q13224	1484 aa		34.1	■■■■□ 3.05
KCNQ4-204	ENST00000509682	EFCAB5	A4FU69	1503 aa		34.09	■■■■□ 3.05
KCNQ4-204	ENST00000509682	ADAMTS12	P58397	1594 aa		34.08	■■■■□ 3.05
KCNQ4-204	ENST00000509682	FHAD1	B1AJZ9	1412 aa		34.06	■■■■□ 3.04
KCNQ4-204	ENST00000509682	EIF4G3	O43432	1585 aa	Known RBP	34.05	■■■■□ 3.04
KCNQ4-204	ENST00000509682	FHOD3	Q2V2M9	1422 aa		33.92	■■■■□ 3.02
KCNQ4-204	ENST00000509682	P3H3	Q8IVL6	736 aa		33.92	■■■■□ 3.02
KCNQ4-204	ENST00000509682	SAMD9	Q5K651	1589 aa		33.9	■■■■□ 3.02
KCNQ4-204	ENST00000509682	PCF11	O94913	1555 aa	Known RBP	33.88	■■■■□ 3.01
KCNQ4-204	ENST00000509682	MAP3K1	Q13233	1512 aa		33.87	■■■■□ 3.01
KCNQ4-204	ENST00000509682	KANK4	Q5T7N3	995 aa	Predicted RBP	33.87	■■■■□ 3.01
KCNQ4-204	ENST00000509682	SNAPC4	Q5SXM2	1469 aa		33.86	■■■■□ 3.01
KCNQ4-204	ENST00000509682	TIAM1	Q13009	1591 aa		33.85	■■■■□ 3.01
KCNQ4-204	ENST00000509682	ZEB1	P37275	1124 aa	Predicted RBP	33.81	■■■■□ 3
KCNQ4-204	ENST00000509682	IQGAP2	Q13576	1575 aa		33.8	■■■■□ 3
KCNQ4-204	ENST00000509682	FYCO1	Q9BQS8	1478 aa		33.78	■■■■□ 3
KCNQ4-204	ENST00000509682	CFAP43	Q8NDM7	1665 aa		33.78	■■■■□ 3
KCNQ4-204	ENST00000509682	FMN1	Q68DA7	1419 aa		33.77	■■■■□ 3
KCNQ4-204	ENST00000509682	MAGI1	Q96QZ7	1491 aa	Predicted RBP	33.76	■■■■□ 3
KCNQ4-204	ENST00000509682	CASKIN1	Q8WXD9	1431 aa		33.75	■■■□□ 2.99
KCNQ4-204	ENST00000509682	GRIN2A	Q12879	1464 aa		33.71	■■■□□ 2.99
KCNQ4-204	ENST00000509682	LRRC9	Q6ZRR7	1453 aa		33.67	■■■□□ 2.98
KCNQ4-204	ENST00000509682	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	33.65	■■■□□ 2.98
KCNQ4-204	ENST00000509682	SYNJ2	O15056	1496 aa		33.64	■■■□□ 2.98
KCNQ4-204	ENST00000509682	ATP1B4	Q9UN42	357 aa	Predicted RBP	33.64	■■■□□ 2.98
KCNQ4-204	ENST00000509682	KIAA0586	Q9BVV6	1533 aa		33.61	■■■□□ 2.97
KCNQ4-204	ENST00000509682	UGGT2	Q9NYU1	1516 aa		33.61	■■■□□ 2.97
KCNQ4-204	ENST00000509682	RRBP1	Q9P2E9	1410 aa	Known RBP	33.61	■■■□□ 2.97
KCNQ4-204	ENST00000509682	HNRNPUL2	Q1KMD3	747 aa	Known RBP	33.61	■■■□□ 2.97
KCNQ4-204	ENST00000509682	CCER1	Q8TC90	406 aa	Predicted RBP	33.59	■■■□□ 2.97
KCNQ4-204	ENST00000509682	CHMP7	Q8WUX9	453 aa	Predicted RBP	33.55	■■■□□ 2.96
KCNQ4-204	ENST00000509682	LRRIQ1	Q96JM4	1722 aa		33.52	■■■□□ 2.96
KCNQ4-204	ENST00000509682	CEP170	Q5SW79	1584 aa		33.51	■■■□□ 2.95
KCNQ4-204	ENST00000509682	CCNB3	Q8WWL7	1395 aa		33.48	■■■□□ 2.95
KCNQ4-204	ENST00000509682	KIAA0556	O60303	1618 aa		33.46	■■■□□ 2.95
KCNQ4-204	ENST00000509682	FBLN2	P98095	1184 aa		33.44	■■■□□ 2.94
KCNQ4-204	ENST00000509682	HECW1	Q76N89	1606 aa		33.42	■■■□□ 2.94
KCNQ4-204	ENST00000509682	DISP1	Q96F81	1524 aa		33.41	■■■□□ 2.94
KCNQ4-204	ENST00000509682	NUP160	Q12769	1436 aa		33.41	■■■□□ 2.94
KCNQ4-204	ENST00000509682	CHD1	O14646	1710 aa		33.4	■■■□□ 2.94
KCNQ4-204	ENST00000509682	PHLDB1	Q86UU1	1377 aa		33.39	■■■□□ 2.94
KCNQ4-204	ENST00000509682	CCDC18	Q5T9S5	1454 aa		33.36	■■■□□ 2.93
KCNQ4-204	ENST00000509682	MTUS2	Q5JR59	1369 aa		33.33	■■■□□ 2.93
KCNQ4-204	ENST00000509682	EHBP1L1	Q8N3D4	1523 aa		33.29	■■■□□ 2.92
KCNQ4-204	ENST00000509682	EPRS	P07814	1512 aa	Known RBP	33.25	■■■□□ 2.91
KCNQ4-204	ENST00000509682	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.25	■■■□□ 2.91
KCNQ4-204	ENST00000509682	RAPGEF6	Q8TEU7	1601 aa		33.2	■■■□□ 2.9
KCNQ4-204	ENST00000509682	CARMIL2	Q6F5E8	1435 aa		33.19	■■■□□ 2.9
KCNQ4-204	ENST00000509682	JPH4	Q96JJ6	628 aa		33.19	■■■□□ 2.9
KCNQ4-204	ENST00000509682	MAGI3	Q5TCQ9	1506 aa		33.19	■■■□□ 2.9
KCNQ4-204	ENST00000509682	NCOA2	Q15596	1464 aa		33.17	■■■□□ 2.9
KCNQ4-204	ENST00000509682	CDK13	Q14004	1512 aa	Known RBP	33.17	■■■□□ 2.9
KCNQ4-204	ENST00000509682	ITGAE	P38570	1179 aa		33.16	■■■□□ 2.9
KCNQ4-204	ENST00000509682	FAM50A	Q14320	339 aa	Known RBP	33.14	■■■□□ 2.9
KCNQ4-204	ENST00000509682	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.12	■■■□□ 2.89
KCNQ4-204	ENST00000509682	FGD6	Q6ZV73	1430 aa		33.12	■■■□□ 2.89
KCNQ4-204	ENST00000509682	ARHGEF11	O15085	1522 aa		33.09	■■■□□ 2.89
KCNQ4-204	ENST00000509682	NUP153	P49790	1475 aa	Known RBP	33.09	■■■□□ 2.89
KCNQ4-204	ENST00000509682	MYOM3	Q5VTT5	1437 aa		33.07	■■■□□ 2.88
KCNQ4-204	ENST00000509682	CLASP1	Q7Z460	1538 aa		33.03	■■■□□ 2.88
KCNQ4-204	ENST00000509682	ARID3C	A6NKF2	412 aa		33.02	■■■□□ 2.88
KCNQ4-204	ENST00000509682	PLB1	Q6P1J6	1458 aa		33	■■■□□ 2.87
KCNQ4-204	ENST00000509682	SHROOM2	Q13796	1616 aa		32.98	■■■□□ 2.87
KCNQ4-204	ENST00000509682	DHX57	Q6P158	1386 aa	Known RBP	32.97	■■■□□ 2.87
KCNQ4-204	ENST00000509682	PRG4	Q92954	1404 aa	Predicted RBP	32.95	■■■□□ 2.87
KCNQ4-204	ENST00000509682	PTPN23	Q9H3S7	1636 aa		32.95	■■■□□ 2.86
KCNQ4-204	ENST00000509682	SETD5	Q9C0A6	1442 aa		32.93	■■■□□ 2.86
KCNQ4-204	ENST00000509682	RAB3GAP2	Q9H2M9	1393 aa		32.93	■■■□□ 2.86
KCNQ4-204	ENST00000509682	ABCA8	O94911	1581 aa		32.92	■■■□□ 2.86
KCNQ4-204	ENST00000509682	CLSPN	Q9HAW4	1339 aa		32.9	■■■□□ 2.86
KCNQ4-204	ENST00000509682	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.9	■■■□□ 2.86
KCNQ4-204	ENST00000509682	TCOF1	Q13428	1488 aa	Known RBP	32.85	■■■□□ 2.85
KCNQ4-204	ENST00000509682	OSCAR	Q8IYS5	282 aa		32.83	■■■□□ 2.85
KCNQ4-204	ENST00000509682	MIA2	Q96PC5	1412 aa		32.83	■■■□□ 2.85
KCNQ4-204	ENST00000509682	TRO	Q12816	1431 aa	Predicted RBP	32.81	■■■□□ 2.84
KCNQ4-204	ENST00000509682	PTPRG	P23470	1445 aa		32.8	■■■□□ 2.84
KCNQ4-204	ENST00000509682	ERCC6L2	Q5T890	1561 aa		32.79	■■■□□ 2.84
KCNQ4-204	ENST00000509682	ADCY10	Q96PN6	1610 aa		32.77	■■■□□ 2.84
KCNQ4-204	ENST00000509682	PTPRK	Q15262	1439 aa		32.76	■■■□□ 2.83
KCNQ4-204	ENST00000509682	ATP10B	O94823	1461 aa		32.71	■■■□□ 2.83
KCNQ4-204	ENST00000509682	HFM1	A2PYH4	1435 aa		32.69	■■■□□ 2.82
KCNQ4-204	ENST00000509682	KIF14	Q15058	1648 aa		32.68	■■■□□ 2.82
KCNQ4-204	ENST00000509682	ITSN2	Q9NZM3	1697 aa		32.68	■■■□□ 2.82
KCNQ4-204	ENST00000509682	UACA	Q9BZF9	1416 aa		32.62	■■■□□ 2.81
KCNQ4-204	ENST00000509682	MAPKBP1	O60336	1514 aa		32.62	■■■□□ 2.81
KCNQ4-204	ENST00000509682	PLEKHD1	A6NEE1	506 aa		32.61	■■■□□ 2.81
KCNQ4-204	ENST00000509682	NAIP	Q13075	1403 aa		32.59	■■■□□ 2.81
KCNQ4-204	ENST00000509682	GCC2	Q8IWJ2	1684 aa		32.58	■■■□□ 2.81
KCNQ4-204	ENST00000509682	DNMT1	P26358	1616 aa	Known RBP	32.56	■■■□□ 2.8
KCNQ4-204	ENST00000509682	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.56	■■■□□ 2.8
KCNQ4-204	ENST00000509682	AKNA	Q7Z591	1439 aa		32.54	■■■□□ 2.8
KCNQ4-204	ENST00000509682	ABCC2	Q92887	1545 aa		32.53	■■■□□ 2.8
KCNQ4-204	ENST00000509682	DAPK1	P53355	1430 aa		32.51	■■■□□ 2.8
KCNQ4-204	ENST00000509682	CDC42BPA	Q5VT25	1732 aa		32.51	■■■□□ 2.79
KCNQ4-204	ENST00000509682	CAMSAP2	Q08AD1	1489 aa		32.5	■■■□□ 2.79
KCNQ4-204	ENST00000509682	ABCC10	Q5T3U5	1492 aa		32.5	■■■□□ 2.79
KCNQ4-204	ENST00000509682	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.49	■■■□□ 2.79
KCNQ4-204	ENST00000509682	CHIC2	Q9UKJ5	165 aa		32.49	■■■□□ 2.79
KCNQ4-204	ENST00000509682	ZNF644	Q9H582	1327 aa	Predicted RBP	32.48	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms