RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 CEP162Q5TB80 1403 aa12.58□□□□□ -0.4
NR1I3-226ENST00000508740 PRXQ9BXM0 1461 aa12.58□□□□□ -0.4
NR1I3-226ENST00000508740 CYB5RLQ6IPT4 315 aa12.57□□□□□ -0.4
NR1I3-226ENST00000508740 RAPGEF2Q9Y4G8 1499 aa12.57□□□□□ -0.4
NR1I3-226ENST00000508740 FOXD4L1Q9NU39 408 aa12.56□□□□□ -0.4
NR1I3-226ENST00000508740 IGF1RP08069 1367 aa12.56□□□□□ -0.4
NR1I3-226ENST00000508740 POLA1P09884 1462 aaPredicted RBP12.55□□□□□ -0.4
NR1I3-226ENST00000508740 RAD54L2Q9Y4B4 1467 aa12.53□□□□□ -0.4
NR1I3-226ENST00000508740 SLC4A2P04920 1241 aa12.53□□□□□ -0.4
NR1I3-226ENST00000508740 TRHP20396 242 aaPredicted RBP12.53□□□□□ -0.4
NR1I3-226ENST00000508740 ERICH3Q5RHP9 1530 aa12.52□□□□□ -0.4
NR1I3-226ENST00000508740 WDR97A6NE52 1622 aa12.52□□□□□ -0.4
NR1I3-226ENST00000508740 CHD1O14646 1710 aa12.52□□□□□ -0.41
NR1I3-226ENST00000508740 PCGF6Q9BYE7 350 aa12.52□□□□□ -0.41
NR1I3-226ENST00000508740 ARAP1Q96P48 1450 aa12.52□□□□□ -0.41
NR1I3-226ENST00000508740 ABCA10Q8WWZ4 1543 aa12.52□□□□□ -0.41
NR1I3-226ENST00000508740 TARBP1Q13395 1621 aaKnown RBP12.51□□□□□ -0.41
NR1I3-226ENST00000508740 TRIM26Q12899 539 aaPredicted RBP12.5□□□□□ -0.41
NR1I3-226ENST00000508740 CARMIL1Q5VZK9 1371 aa12.49□□□□□ -0.41
NR1I3-226ENST00000508740 DCAF8L1A6NGE4 600 aa12.49□□□□□ -0.41
NR1I3-226ENST00000508740 AQRO60306 1485 aaKnown RBP eCLIP12.47□□□□□ -0.41
NR1I3-226ENST00000508740 CLIP1P30622 1438 aa12.47□□□□□ -0.41
NR1I3-226ENST00000508740 FBLN2P98095 1184 aa12.45□□□□□ -0.42
NR1I3-226ENST00000508740 MAGI1Q96QZ7 1491 aaPredicted RBP12.43□□□□□ -0.42
NR1I3-226ENST00000508740 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
NR1I3-226ENST00000508740 CLASP1Q7Z460 1538 aa12.42□□□□□ -0.42
NR1I3-226ENST00000508740 RANGAP1P46060 587 aaPredicted RBP12.41□□□□□ -0.42
NR1I3-226ENST00000508740 PPARGC1BQ86YN6 1023 aaKnown RBP12.39□□□□□ -0.43
NR1I3-226ENST00000508740 CHMP7Q8WUX9 453 aaPredicted RBP12.39□□□□□ -0.43
NR1I3-226ENST00000508740 GAPVD1Q14C86 1478 aa12.39□□□□□ -0.43
NR1I3-226ENST00000508740 SNAPC4Q5SXM2 1469 aa12.38□□□□□ -0.43
NR1I3-226ENST00000508740 GRIN2BQ13224 1484 aa12.37□□□□□ -0.43
NR1I3-226ENST00000508740 VPS8Q8N3P4 1428 aa12.37□□□□□ -0.43
NR1I3-226ENST00000508740 SYNJ2O15056 1496 aa12.36□□□□□ -0.43
NR1I3-226ENST00000508740 ABCA5Q8WWZ7 1642 aa12.35□□□□□ -0.43
NR1I3-226ENST00000508740 CUL7Q14999 1698 aa12.32□□□□□ -0.44
NR1I3-226ENST00000508740 ARHGAP35Q9NRY4 1499 aa12.3□□□□□ -0.44
NR1I3-226ENST00000508740 APLP2Q06481 763 aa12.3□□□□□ -0.44
NR1I3-226ENST00000508740 FHAD1B1AJZ9 1412 aa12.27□□□□□ -0.45
NR1I3-226ENST00000508740 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.25□□□□□ -0.45
NR1I3-226ENST00000508740 TTBK1Q5TCY1 1321 aaPredicted RBP12.25□□□□□ -0.45
NR1I3-226ENST00000508740 PBRM1Q86U86 1689 aa12.25□□□□□ -0.45
NR1I3-226ENST00000508740 HRCP23327 699 aa12.24□□□□□ -0.45
NR1I3-226ENST00000508740 MYCNP04198 464 aaPredicted RBP12.23□□□□□ -0.45
NR1I3-226ENST00000508740 P3H3Q8IVL6 736 aa12.21□□□□□ -0.45
NR1I3-226ENST00000508740 ADAMTS12P58397 1594 aa12.2□□□□□ -0.46
NR1I3-226ENST00000508740 EFCAB5A4FU69 1503 aa12.19□□□□□ -0.46
NR1I3-226ENST00000508740 GRIN2AQ12879 1464 aa12.19□□□□□ -0.46
NR1I3-226ENST00000508740 KANK4Q5T7N3 995 aaPredicted RBP12.17□□□□□ -0.46
NR1I3-226ENST00000508740 NUP160Q12769 1436 aa12.17□□□□□ -0.46
NR1I3-226ENST00000508740 FHOD3Q2V2M9 1422 aa12.17□□□□□ -0.46
NR1I3-226ENST00000508740 CTTNBP2Q8WZ74 1663 aa12.15□□□□□ -0.46
NR1I3-226ENST00000508740 CEP170Q5SW79 1584 aa12.14□□□□□ -0.47
NR1I3-226ENST00000508740 U3KPZ7 1027 aaPredicted RBP12.14□□□□□ -0.47
NR1I3-226ENST00000508740 SHROOM2Q13796 1616 aa12.14□□□□□ -0.47
NR1I3-226ENST00000508740 MAP3K1Q13233 1512 aa12.12□□□□□ -0.47
NR1I3-226ENST00000508740 POTEDQ86YR6 584 aa12.12□□□□□ -0.47
NR1I3-226ENST00000508740 FMN1Q68DA7 1419 aa12.11□□□□□ -0.47
NR1I3-226ENST00000508740 CASKIN1Q8WXD9 1431 aa12.11□□□□□ -0.47
NR1I3-226ENST00000508740 SAMD9Q5K651 1589 aa12.11□□□□□ -0.47
NR1I3-226ENST00000508740 ATP1B4Q9UN42 357 aaPredicted RBP12.1□□□□□ -0.47
NR1I3-226ENST00000508740 KIAA0586Q9BVV6 1533 aa12.1□□□□□ -0.47
NR1I3-226ENST00000508740 IQGAP2Q13576 1575 aa12.09□□□□□ -0.47
NR1I3-226ENST00000508740 ERCC6L2Q5T890 1561 aa12.09□□□□□ -0.47
NR1I3-226ENST00000508740 FYCO1Q9BQS8 1478 aa12.08□□□□□ -0.48
NR1I3-226ENST00000508740 KIF13AQ9H1H9 1805 aa12.07□□□□□ -0.48
NR1I3-226ENST00000508740 UGGT2Q9NYU1 1516 aa12.06□□□□□ -0.48
NR1I3-226ENST00000508740 TIAM1Q13009 1591 aa12.06□□□□□ -0.48
NR1I3-226ENST00000508740 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
NR1I3-226ENST00000508740 ZEB1P37275 1124 aaPredicted RBP12.06□□□□□ -0.48
NR1I3-226ENST00000508740 PCF11O94913 1555 aaKnown RBP12.05□□□□□ -0.48
NR1I3-226ENST00000508740 LRRC9Q6ZRR7 1453 aa12.05□□□□□ -0.48
NR1I3-226ENST00000508740 MAPKBP1O60336 1514 aa12.05□□□□□ -0.48
NR1I3-226ENST00000508740 ABCC10Q5T3U5 1492 aa12.04□□□□□ -0.48
NR1I3-226ENST00000508740 PRG4Q92954 1404 aaPredicted RBP12.03□□□□□ -0.48
NR1I3-226ENST00000508740 HNRNPUL2Q1KMD3 747 aaKnown RBP12.03□□□□□ -0.48
NR1I3-226ENST00000508740 RRBP1Q9P2E9 1410 aaKnown RBP12.03□□□□□ -0.48
NR1I3-226ENST00000508740 ATXN8OSP0DMR3 200 aa12.02□□□□□ -0.49
NR1I3-226ENST00000508740 JPH4Q96JJ6 628 aa12.02□□□□□ -0.49
NR1I3-226ENST00000508740 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
NR1I3-226ENST00000508740 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.01□□□□□ -0.49
NR1I3-226ENST00000508740 DISP1Q96F81 1524 aa12.01□□□□□ -0.49
NR1I3-226ENST00000508740 FAM69CQ0P6D2 419 aa12□□□□□ -0.49
NR1I3-226ENST00000508740 CCNB3Q8WWL7 1395 aa11.99□□□□□ -0.49
NR1I3-226ENST00000508740 CCER1Q8TC90 406 aaPredicted RBP11.98□□□□□ -0.49
NR1I3-226ENST00000508740 CFAP43Q8NDM7 1665 aa11.97□□□□□ -0.49
NR1I3-226ENST00000508740 DIP2BQ9P265 1576 aa11.97□□□□□ -0.49
NR1I3-226ENST00000508740 KDM6BO15054 1643 aa11.97□□□□□ -0.49
NR1I3-226ENST00000508740 PHLDB1Q86UU1 1377 aa11.96□□□□□ -0.49
NR1I3-226ENST00000508740 KIAA0556O60303 1618 aa11.96□□□□□ -0.5
NR1I3-226ENST00000508740 CARMIL2Q6F5E8 1435 aa11.95□□□□□ -0.5
NR1I3-226ENST00000508740 MTUS2Q5JR59 1369 aa11.95□□□□□ -0.5
NR1I3-226ENST00000508740 CCDC18Q5T9S5 1454 aa11.95□□□□□ -0.5
NR1I3-226ENST00000508740 SAMD1Q6SPF0 538 aaPredicted RBP11.92□□□□□ -0.5
NR1I3-226ENST00000508740 ADCY10Q96PN6 1610 aa11.92□□□□□ -0.5
NR1I3-226ENST00000508740 EPRSP07814 1512 aaKnown RBP11.91□□□□□ -0.5
NR1I3-226ENST00000508740 HECW1Q76N89 1606 aa11.91□□□□□ -0.5
NR1I3-226ENST00000508740 FAM50AQ14320 339 aaKnown RBP11.89□□□□□ -0.51
NR1I3-226ENST00000508740 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.89□□□□□ -0.51
NR1I3-226ENST00000508740 EHBP1L1Q8N3D4 1523 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms