RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 EFCAB5A4FU69 1503 aa25.9■■□□□ 1.74
DDX41-207ENST00000507900 RANGAP1P46060 587 aaPredicted RBP25.89■■□□□ 1.73
DDX41-207ENST00000507900 MAGI1Q96QZ7 1491 aaPredicted RBP25.84■■□□□ 1.73
DDX41-207ENST00000507900 SNAPC4Q5SXM2 1469 aa25.84■■□□□ 1.73
DDX41-207ENST00000507900 SAMD9Q5K651 1589 aa25.8■■□□□ 1.72
DDX41-207ENST00000507900 PPARGC1BQ86YN6 1023 aaKnown RBP25.77■■□□□ 1.72
DDX41-207ENST00000507900 GRIN2AQ12879 1464 aa25.74■■□□□ 1.71
DDX41-207ENST00000507900 IQGAP2Q13576 1575 aa25.73■■□□□ 1.71
DDX41-207ENST00000507900 SYNJ2O15056 1496 aa25.72■■□□□ 1.71
DDX41-207ENST00000507900 APLP2Q06481 763 aa25.69■■□□□ 1.7
DDX41-207ENST00000507900 MAP3K1Q13233 1512 aa25.69■■□□□ 1.7
DDX41-207ENST00000507900 FHOD3Q2V2M9 1422 aa25.66■■□□□ 1.7
DDX41-207ENST00000507900 PCF11O94913 1555 aaKnown RBP25.64■■□□□ 1.7
DDX41-207ENST00000507900 KIAA0586Q9BVV6 1533 aa25.64■■□□□ 1.69
DDX41-207ENST00000507900 UGGT2Q9NYU1 1516 aa25.64■■□□□ 1.69
DDX41-207ENST00000507900 FMN1Q68DA7 1419 aa25.61■■□□□ 1.69
DDX41-207ENST00000507900 FYCO1Q9BQS8 1478 aa25.61■■□□□ 1.69
DDX41-207ENST00000507900 TIAM1Q13009 1591 aa25.6■■□□□ 1.69
DDX41-207ENST00000507900 CFAP43Q8NDM7 1665 aa25.6■■□□□ 1.69
DDX41-207ENST00000507900 CEP170Q5SW79 1584 aa25.58■■□□□ 1.69
DDX41-207ENST00000507900 CASKIN1Q8WXD9 1431 aa25.58■■□□□ 1.69
DDX41-207ENST00000507900 NUP160Q12769 1436 aa25.56■■□□□ 1.68
DDX41-207ENST00000507900 P3H3Q8IVL6 736 aa25.54■■□□□ 1.68
DDX41-207ENST00000507900 CHMP7Q8WUX9 453 aaPredicted RBP25.53■■□□□ 1.68
DDX41-207ENST00000507900 TTBK1Q5TCY1 1321 aaPredicted RBP25.52■■□□□ 1.68
DDX41-207ENST00000507900 KIAA0556O60303 1618 aa25.48■■□□□ 1.67
DDX41-207ENST00000507900 KANK4Q5T7N3 995 aaPredicted RBP25.47■■□□□ 1.67
DDX41-207ENST00000507900 DISP1Q96F81 1524 aa25.46■■□□□ 1.67
DDX41-207ENST00000507900 LRRC9Q6ZRR7 1453 aa25.44■■□□□ 1.66
DDX41-207ENST00000507900 CHD1O14646 1710 aa25.44■■□□□ 1.66
DDX41-207ENST00000507900 LRRIQ1Q96JM4 1722 aa25.42■■□□□ 1.66
DDX41-207ENST00000507900 HRCP23327 699 aa25.4■■□□□ 1.66
DDX41-207ENST00000507900 FBLN2P98095 1184 aa25.38■■□□□ 1.65
DDX41-207ENST00000507900 HECW1Q76N89 1606 aa25.37■■□□□ 1.65
DDX41-207ENST00000507900 RRBP1Q9P2E9 1410 aaKnown RBP25.34■■□□□ 1.65
DDX41-207ENST00000507900 CCDC18Q5T9S5 1454 aa25.33■■□□□ 1.65
DDX41-207ENST00000507900 CARMIL2Q6F5E8 1435 aa25.28■■□□□ 1.64
DDX41-207ENST00000507900 JPH4Q96JJ6 628 aa25.27■■□□□ 1.64
DDX41-207ENST00000507900 ATP1B4Q9UN42 357 aaPredicted RBP25.26■■□□□ 1.63
DDX41-207ENST00000507900 SHROOM2Q13796 1616 aa25.25■■□□□ 1.63
DDX41-207ENST00000507900 RAPGEF6Q8TEU7 1601 aa25.25■■□□□ 1.63
DDX41-207ENST00000507900 EPRSP07814 1512 aaKnown RBP25.23■■□□□ 1.63
DDX41-207ENST00000507900 EHBP1L1Q8N3D4 1523 aa25.23■■□□□ 1.63
DDX41-207ENST00000507900 CCNB3Q8WWL7 1395 aa25.19■■□□□ 1.62
DDX41-207ENST00000507900 PHLDB1Q86UU1 1377 aa25.17■■□□□ 1.62
DDX41-207ENST00000507900 SUPT6HQ7KZ85 1726 aaKnown RBP25.17■■□□□ 1.62
DDX41-207ENST00000507900 NUP153P49790 1475 aaKnown RBP25.16■■□□□ 1.62
DDX41-207ENST00000507900 MTUS2Q5JR59 1369 aa25.16■■□□□ 1.62
DDX41-207ENST00000507900 CLASP1Q7Z460 1538 aa25.16■■□□□ 1.62
DDX41-207ENST00000507900 MAGI3Q5TCQ9 1506 aa25.15■■□□□ 1.62
DDX41-207ENST00000507900 CDK13Q14004 1512 aaKnown RBP25.13■■□□□ 1.61
DDX41-207ENST00000507900 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
DDX41-207ENST00000507900 PRG4Q92954 1404 aaPredicted RBP25.12■■□□□ 1.61
DDX41-207ENST00000507900 ABCA8O94911 1581 aa25.11■■□□□ 1.61
DDX41-207ENST00000507900 NCOA2Q15596 1464 aa25.09■■□□□ 1.61
DDX41-207ENST00000507900 PLB1Q6P1J6 1458 aa25.08■■□□□ 1.61
DDX41-207ENST00000507900 ZEB1P37275 1124 aaPredicted RBP25.08■■□□□ 1.61
DDX41-207ENST00000507900 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.07■■□□□ 1.6
DDX41-207ENST00000507900 HNRNPUL2Q1KMD3 747 aaKnown RBP25.06■■□□□ 1.6
DDX41-207ENST00000507900 FGD6Q6ZV73 1430 aa25.02■■□□□ 1.6
DDX41-207ENST00000507900 MYOM3Q5VTT5 1437 aa25■■□□□ 1.59
DDX41-207ENST00000507900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.98■■□□□ 1.59
DDX41-207ENST00000507900 PTPRGP23470 1445 aa24.97■■□□□ 1.59
DDX41-207ENST00000507900 ADCY10Q96PN6 1610 aa24.96■■□□□ 1.59
DDX41-207ENST00000507900 ERCC6L2Q5T890 1561 aa24.95■■□□□ 1.58
DDX41-207ENST00000507900 CCER1Q8TC90 406 aaPredicted RBP24.93■■□□□ 1.58
DDX41-207ENST00000507900 CDK11AQ9UQ88 783 aaPredicted RBP24.93■■□□□ 1.58
DDX41-207ENST00000507900 TROQ12816 1431 aaPredicted RBP24.92■■□□□ 1.58
DDX41-207ENST00000507900 PTPN23Q9H3S7 1636 aa24.91■■□□□ 1.58
DDX41-207ENST00000507900 TCOF1Q13428 1488 aaKnown RBP24.9■■□□□ 1.58
DDX41-207ENST00000507900 ATP10BO94823 1461 aa24.89■■□□□ 1.58
DDX41-207ENST00000507900 MIA2Q96PC5 1412 aa24.89■■□□□ 1.57
DDX41-207ENST00000507900 UACAQ9BZF9 1416 aa24.87■■□□□ 1.57
DDX41-207ENST00000507900 ARID3CA6NKF2 412 aa24.87■■□□□ 1.57
DDX41-207ENST00000507900 FAM50AQ14320 339 aaKnown RBP24.86■■□□□ 1.57
DDX41-207ENST00000507900 ABCC2Q92887 1545 aa24.85■■□□□ 1.57
DDX41-207ENST00000507900 ITSN2Q9NZM3 1697 aa24.82■■□□□ 1.56
DDX41-207ENST00000507900 KIF14Q15058 1648 aa24.81■■□□□ 1.56
DDX41-207ENST00000507900 UHRF1BP1LA0JNW5 1464 aa24.79■■□□□ 1.56
DDX41-207ENST00000507900 ITGAEP38570 1179 aa24.78■■□□□ 1.56
DDX41-207ENST00000507900 SETD5Q9C0A6 1442 aa24.76■■□□□ 1.55
DDX41-207ENST00000507900 ABCC10Q5T3U5 1492 aa24.73■■□□□ 1.55
DDX41-207ENST00000507900 PLEKHD1A6NEE1 506 aa24.72■■□□□ 1.55
DDX41-207ENST00000507900 RAB3GAP2Q9H2M9 1393 aa24.72■■□□□ 1.55
DDX41-207ENST00000507900 PTPRKQ15262 1439 aa24.71■■□□□ 1.55
DDX41-207ENST00000507900 DHX57Q6P158 1386 aaKnown RBP24.71■■□□□ 1.55
DDX41-207ENST00000507900 GPATCH8Q9UKJ3 1502 aaKnown RBP24.71■■□□□ 1.55
DDX41-207ENST00000507900 CDC42BPAQ5VT25 1732 aa24.71■■□□□ 1.55
DDX41-207ENST00000507900 OSCARQ8IYS5 282 aa24.7■■□□□ 1.54
DDX41-207ENST00000507900 CLSPNQ9HAW4 1339 aa24.69■■□□□ 1.54
DDX41-207ENST00000507900 KDM5BQ9UGL1 1544 aa24.68■■□□□ 1.54
DDX41-207ENST00000507900 DNMT1P26358 1616 aaKnown RBP24.68■■□□□ 1.54
DDX41-207ENST00000507900 ZCCHC11Q5TAX3 1644 aaKnown RBP24.68■■□□□ 1.54
DDX41-207ENST00000507900 HFM1A2PYH4 1435 aa24.67■■□□□ 1.54
DDX41-207ENST00000507900 AKNAQ7Z591 1439 aa24.66■■□□□ 1.54
DDX41-207ENST00000507900 GCC2Q8IWJ2 1684 aa24.64■■□□□ 1.53
DDX41-207ENST00000507900 CAMSAP2Q08AD1 1489 aa24.62■■□□□ 1.53
DDX41-207ENST00000507900 PREX2Q70Z35 1606 aa24.59■■□□□ 1.53
DDX41-207ENST00000507900 DAPK1P53355 1430 aa24.59■■□□□ 1.53
DDX41-207ENST00000507900 NAIPQ13075 1403 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms