RNA–Protein interactions for RNA: ENST00000504524.5

PLXND1-204, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,701 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-204ENST00000504524 MAGI1Q96QZ7 1491 aaPredicted RBP28.9■■■□□ 2.22
PLXND1-204ENST00000504524 EFCAB5A4FU69 1503 aa28.85■■■□□ 2.21
PLXND1-204ENST00000504524 SAMD9Q5K651 1589 aa28.81■■■□□ 2.2
PLXND1-204ENST00000504524 GRIN2AQ12879 1464 aa28.8■■■□□ 2.2
PLXND1-204ENST00000504524 SYNJ2O15056 1496 aa28.78■■■□□ 2.2
PLXND1-204ENST00000504524 IQGAP2Q13576 1575 aa28.77■■■□□ 2.2
PLXND1-204ENST00000504524 TRIM26Q12899 539 aaPredicted RBP28.74■■■□□ 2.19
PLXND1-204ENST00000504524 PPARGC1BQ86YN6 1023 aaKnown RBP28.72■■■□□ 2.19
PLXND1-204ENST00000504524 PCGF6Q9BYE7 350 aa28.72■■■□□ 2.19
PLXND1-204ENST00000504524 CEP170Q5SW79 1584 aa28.68■■■□□ 2.18
PLXND1-204ENST00000504524 FHOD3Q2V2M9 1422 aa28.66■■■□□ 2.18
PLXND1-204ENST00000504524 KIAA0586Q9BVV6 1533 aa28.64■■■□□ 2.18
PLXND1-204ENST00000504524 PCF11O94913 1555 aaKnown RBP28.64■■■□□ 2.17
PLXND1-204ENST00000504524 UGGT2Q9NYU1 1516 aa28.64■■■□□ 2.17
PLXND1-204ENST00000504524 CHD1O14646 1710 aa28.62■■■□□ 2.17
PLXND1-204ENST00000504524 NUP160Q12769 1436 aa28.6■■■□□ 2.17
PLXND1-204ENST00000504524 P3H3Q8IVL6 736 aa28.56■■■□□ 2.16
PLXND1-204ENST00000504524 CHMP7Q8WUX9 453 aaPredicted RBP28.56■■■□□ 2.16
PLXND1-204ENST00000504524 CFAP43Q8NDM7 1665 aa28.55■■■□□ 2.16
PLXND1-204ENST00000504524 MAP3K1Q13233 1512 aa28.53■■■□□ 2.16
PLXND1-204ENST00000504524 TIAM1Q13009 1591 aa28.52■■■□□ 2.16
PLXND1-204ENST00000504524 FYCO1Q9BQS8 1478 aa28.51■■■□□ 2.16
PLXND1-204ENST00000504524 KIAA0556O60303 1618 aa28.51■■■□□ 2.15
PLXND1-204ENST00000504524 FMN1Q68DA7 1419 aa28.5■■■□□ 2.15
PLXND1-204ENST00000504524 APLP2Q06481 763 aa28.49■■■□□ 2.15
PLXND1-204ENST00000504524 CASKIN1Q8WXD9 1431 aa28.49■■■□□ 2.15
PLXND1-204ENST00000504524 LRRIQ1Q96JM4 1722 aa28.48■■■□□ 2.15
PLXND1-204ENST00000504524 TTBK1Q5TCY1 1321 aaPredicted RBP28.47■■■□□ 2.15
PLXND1-204ENST00000504524 DISP1Q96F81 1524 aa28.47■■■□□ 2.15
PLXND1-204ENST00000504524 FBLN2P98095 1184 aa28.46■■■□□ 2.15
PLXND1-204ENST00000504524 KANK4Q5T7N3 995 aaPredicted RBP28.38■■■□□ 2.13
PLXND1-204ENST00000504524 HECW1Q76N89 1606 aa28.32■■■□□ 2.12
PLXND1-204ENST00000504524 LRRC9Q6ZRR7 1453 aa28.32■■■□□ 2.12
PLXND1-204ENST00000504524 SHROOM2Q13796 1616 aa28.31■■■□□ 2.12
PLXND1-204ENST00000504524 JPH4Q96JJ6 628 aa28.24■■■□□ 2.11
PLXND1-204ENST00000504524 RAPGEF6Q8TEU7 1601 aa28.23■■■□□ 2.11
PLXND1-204ENST00000504524 CLASP1Q7Z460 1538 aa28.23■■■□□ 2.11
PLXND1-204ENST00000504524 CARMIL2Q6F5E8 1435 aa28.21■■■□□ 2.11
PLXND1-204ENST00000504524 CCDC18Q5T9S5 1454 aa28.2■■■□□ 2.11
PLXND1-204ENST00000504524 ATP1B4Q9UN42 357 aaPredicted RBP28.18■■■□□ 2.1
PLXND1-204ENST00000504524 EPRSP07814 1512 aaKnown RBP28.15■■■□□ 2.1
PLXND1-204ENST00000504524 RRBP1Q9P2E9 1410 aaKnown RBP28.14■■■□□ 2.1
PLXND1-204ENST00000504524 PRG4Q92954 1404 aaPredicted RBP28.13■■■□□ 2.09
PLXND1-204ENST00000504524 MAGI3Q5TCQ9 1506 aa28.12■■■□□ 2.09
PLXND1-204ENST00000504524 EHBP1L1Q8N3D4 1523 aa28.12■■■□□ 2.09
PLXND1-204ENST00000504524 NUP153P49790 1475 aaKnown RBP28.11■■■□□ 2.09
PLXND1-204ENST00000504524 CDK13Q14004 1512 aaKnown RBP28.11■■■□□ 2.09
PLXND1-204ENST00000504524 ABCA8O94911 1581 aa28.09■■■□□ 2.09
PLXND1-204ENST00000504524 SUPT6HQ7KZ85 1726 aaKnown RBP28.07■■■□□ 2.08
PLXND1-204ENST00000504524 PLB1Q6P1J6 1458 aa28.06■■■□□ 2.08
PLXND1-204ENST00000504524 ERCC6L2Q5T890 1561 aa28.06■■■□□ 2.08
PLXND1-204ENST00000504524 PHLDB1Q86UU1 1377 aa28.05■■■□□ 2.08
PLXND1-204ENST00000504524 MTUS2Q5JR59 1369 aa28.02■■■□□ 2.08
PLXND1-204ENST00000504524 ARHGEF11O15085 1522 aa28■■■□□ 2.07
PLXND1-204ENST00000504524 CCNB3Q8WWL7 1395 aa27.98■■■□□ 2.07
PLXND1-204ENST00000504524 NCOA2Q15596 1464 aa27.97■■■□□ 2.07
PLXND1-204ENST00000504524 HRCP23327 699 aa27.95■■■□□ 2.07
PLXND1-204ENST00000504524 PTPRGP23470 1445 aa27.93■■■□□ 2.06
PLXND1-204ENST00000504524 ARID3CA6NKF2 412 aa27.87■■■□□ 2.05
PLXND1-204ENST00000504524 ADCY10Q96PN6 1610 aa27.87■■■□□ 2.05
PLXND1-204ENST00000504524 HNRNPUL2Q1KMD3 747 aaKnown RBP27.86■■■□□ 2.05
PLXND1-204ENST00000504524 FGD6Q6ZV73 1430 aa27.85■■■□□ 2.05
PLXND1-204ENST00000504524 MYOM3Q5VTT5 1437 aa27.84■■■□□ 2.05
PLXND1-204ENST00000504524 ATP10BO94823 1461 aa27.82■■■□□ 2.04
PLXND1-204ENST00000504524 UACAQ9BZF9 1416 aa27.81■■■□□ 2.04
PLXND1-204ENST00000504524 TROQ12816 1431 aaPredicted RBP27.8■■■□□ 2.04
PLXND1-204ENST00000504524 ABCC2Q92887 1545 aa27.8■■■□□ 2.04
PLXND1-204ENST00000504524 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.8■■■□□ 2.04
PLXND1-204ENST00000504524 PTPN23Q9H3S7 1636 aa27.78■■■□□ 2.04
PLXND1-204ENST00000504524 KIF14Q15058 1648 aa27.77■■■□□ 2.04
PLXND1-204ENST00000504524 CDK11AQ9UQ88 783 aaPredicted RBP27.72■■■□□ 2.03
PLXND1-204ENST00000504524 TCOF1Q13428 1488 aaKnown RBP27.72■■■□□ 2.03
PLXND1-204ENST00000504524 UHRF1BP1LA0JNW5 1464 aa27.72■■■□□ 2.03
PLXND1-204ENST00000504524 OSCARQ8IYS5 282 aa27.71■■■□□ 2.03
PLXND1-204ENST00000504524 ITSN2Q9NZM3 1697 aa27.7■■■□□ 2.03
PLXND1-204ENST00000504524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.7■■■□□ 2.03
PLXND1-204ENST00000504524 FAM50AQ14320 339 aaKnown RBP27.67■■■□□ 2.02
PLXND1-204ENST00000504524 MIA2Q96PC5 1412 aa27.67■■■□□ 2.02
PLXND1-204ENST00000504524 ZCCHC11Q5TAX3 1644 aaKnown RBP27.67■■■□□ 2.02
PLXND1-204ENST00000504524 CDC42BPAQ5VT25 1732 aa27.65■■■□□ 2.02
PLXND1-204ENST00000504524 ABCC10Q5T3U5 1492 aa27.62■■■□□ 2.01
PLXND1-204ENST00000504524 KDM5BQ9UGL1 1544 aa27.6■■■□□ 2.01
PLXND1-204ENST00000504524 ITGAEP38570 1179 aa27.6■■■□□ 2.01
PLXND1-204ENST00000504524 PLEKHD1A6NEE1 506 aa27.57■■■□□ 2
PLXND1-204ENST00000504524 GPATCH8Q9UKJ3 1502 aaKnown RBP27.57■■■□□ 2
PLXND1-204ENST00000504524 CCER1Q8TC90 406 aaPredicted RBP27.56■■■□□ 2
PLXND1-204ENST00000504524 ZEB1P37275 1124 aaPredicted RBP27.55■■■□□ 2
PLXND1-204ENST00000504524 PTPRKQ15262 1439 aa27.55■■■□□ 2
PLXND1-204ENST00000504524 DNMT1P26358 1616 aaKnown RBP27.52■■■□□ 2
PLXND1-204ENST00000504524 PREX2Q70Z35 1606 aa27.49■■□□□ 1.99
PLXND1-204ENST00000504524 CDC42BPBQ9Y5S2 1711 aa27.49■■□□□ 1.99
PLXND1-204ENST00000504524 SETD5Q9C0A6 1442 aa27.48■■□□□ 1.99
PLXND1-204ENST00000504524 TTC37Q6PGP7 1564 aa27.48■■□□□ 1.99
PLXND1-204ENST00000504524 CAMSAP2Q08AD1 1489 aa27.47■■□□□ 1.99
PLXND1-204ENST00000504524 GCC2Q8IWJ2 1684 aa27.46■■□□□ 1.99
PLXND1-204ENST00000504524 RAB3GAP2Q9H2M9 1393 aa27.46■■□□□ 1.99
PLXND1-204ENST00000504524 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.46■■□□□ 1.99
PLXND1-204ENST00000504524 CROCC2H7BZ55 1655 aa27.44■■□□□ 1.98
PLXND1-204ENST00000504524 MYO5CQ9NQX4 1742 aa27.44■■□□□ 1.98
PLXND1-204ENST00000504524 DHX57Q6P158 1386 aaKnown RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 542.3 ms