RNA–Protein interactions for RNA: ENST00000504401.1

ROPN1B-202, Transcript of rhophilin associated tail protein 1B, humanhuman

TSL 1 (best) BASIC

Gene ROPN1B, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROPN1B-202ENST00000504401 CCER1Q8TC90 406 aaPredicted RBP20.36■□□□□ 0.85
ROPN1B-202ENST00000504401 WDR97A6NE52 1622 aa20.32■□□□□ 0.84
ROPN1B-202ENST00000504401 GAPVD1Q14C86 1478 aa20.31■□□□□ 0.84
ROPN1B-202ENST00000504401 TARBP1Q13395 1621 aaKnown RBP20.3■□□□□ 0.84
ROPN1B-202ENST00000504401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.3■□□□□ 0.84
ROPN1B-202ENST00000504401 DIEXFQ68CQ4 756 aaKnown RBP20.3■□□□□ 0.84
ROPN1B-202ENST00000504401 AQRO60306 1485 aaKnown RBP eCLIP20.3■□□□□ 0.84
ROPN1B-202ENST00000504401 DNAJC5Q9H3Z4 198 aa20.3■□□□□ 0.84
ROPN1B-202ENST00000504401 EIF5BO60841 1220 aaKnown RBP20.29■□□□□ 0.84
ROPN1B-202ENST00000504401 ABCA5Q8WWZ7 1642 aa20.26■□□□□ 0.83
ROPN1B-202ENST00000504401 WDR62O43379 1518 aa20.26■□□□□ 0.83
ROPN1B-202ENST00000504401 ZNF608Q9ULD9 1512 aaPredicted RBP20.25■□□□□ 0.83
ROPN1B-202ENST00000504401 VPS8Q8N3P4 1428 aa20.22■□□□□ 0.83
ROPN1B-202ENST00000504401 ARAP1Q96P48 1450 aa20.21■□□□□ 0.83
ROPN1B-202ENST00000504401 P3H3Q8IVL6 736 aa20.2■□□□□ 0.82
ROPN1B-202ENST00000504401 THOC2Q8NI27 1593 aaKnown RBP20.2■□□□□ 0.82
ROPN1B-202ENST00000504401 ARHGAP35Q9NRY4 1499 aa20.18■□□□□ 0.82
ROPN1B-202ENST00000504401 CUL7Q14999 1698 aa20.16■□□□□ 0.82
ROPN1B-202ENST00000504401 IFT140Q96RY7 1462 aa20.16■□□□□ 0.82
ROPN1B-202ENST00000504401 PBRM1Q86U86 1689 aa20.09■□□□□ 0.81
ROPN1B-202ENST00000504401 UBE2Q2Q8WVN8 375 aa20.08■□□□□ 0.81
ROPN1B-202ENST00000504401 GRIN2BQ13224 1484 aa20.07■□□□□ 0.8
ROPN1B-202ENST00000504401 EIF4G3O43432 1585 aaKnown RBP20.04■□□□□ 0.8
ROPN1B-202ENST00000504401 FHAD1B1AJZ9 1412 aa20.03■□□□□ 0.8
ROPN1B-202ENST00000504401 KANK4Q5T7N3 995 aaPredicted RBP20.03■□□□□ 0.8
ROPN1B-202ENST00000504401 FHOD3Q2V2M9 1422 aa20.03■□□□□ 0.8
ROPN1B-202ENST00000504401 SNAPC4Q5SXM2 1469 aa20.02■□□□□ 0.8
ROPN1B-202ENST00000504401 ZNF316A6NFI3 1004 aaPredicted RBP20.01■□□□□ 0.79
ROPN1B-202ENST00000504401 ADAMTS12P58397 1594 aa20.01■□□□□ 0.79
ROPN1B-202ENST00000504401 ATP1B4Q9UN42 357 aaPredicted RBP20■□□□□ 0.79
ROPN1B-202ENST00000504401 FBLN2P98095 1184 aa19.99■□□□□ 0.79
ROPN1B-202ENST00000504401 CTTNBP2Q8WZ74 1663 aa19.99■□□□□ 0.79
ROPN1B-202ENST00000504401 CHMP7Q8WUX9 453 aaPredicted RBP19.92■□□□□ 0.78
ROPN1B-202ENST00000504401 EFCAB5A4FU69 1503 aa19.87■□□□□ 0.77
ROPN1B-202ENST00000504401 GRIN2AQ12879 1464 aa19.86■□□□□ 0.77
ROPN1B-202ENST00000504401 PCF11O94913 1555 aaKnown RBP19.86■□□□□ 0.77
ROPN1B-202ENST00000504401 HNRNPUL2Q1KMD3 747 aaKnown RBP19.85■□□□□ 0.77
ROPN1B-202ENST00000504401 MAGI1Q96QZ7 1491 aaPredicted RBP19.84■□□□□ 0.77
ROPN1B-202ENST00000504401 IQGAP2Q13576 1575 aa19.83■□□□□ 0.77
ROPN1B-202ENST00000504401 ANO8Q9HCE9 1232 aaPredicted RBP19.82■□□□□ 0.76
ROPN1B-202ENST00000504401 SAMD9Q5K651 1589 aa19.82■□□□□ 0.76
ROPN1B-202ENST00000504401 SYNJ2O15056 1496 aa19.82■□□□□ 0.76
ROPN1B-202ENST00000504401 YTHDC1Q96MU7 727 aaKnown RBP19.81■□□□□ 0.76
ROPN1B-202ENST00000504401 ARID3CA6NKF2 412 aa19.78■□□□□ 0.76
ROPN1B-202ENST00000504401 TIAM1Q13009 1591 aa19.78■□□□□ 0.76
ROPN1B-202ENST00000504401 FMN1Q68DA7 1419 aa19.77■□□□□ 0.76
ROPN1B-202ENST00000504401 KIAA0586Q9BVV6 1533 aa19.76■□□□□ 0.75
ROPN1B-202ENST00000504401 CEP170Q5SW79 1584 aa19.76■□□□□ 0.75
ROPN1B-202ENST00000504401 CASKIN1Q8WXD9 1431 aa19.76■□□□□ 0.75
ROPN1B-202ENST00000504401 MIER1Q8N108 512 aa19.75■□□□□ 0.75
ROPN1B-202ENST00000504401 FYCO1Q9BQS8 1478 aa19.73■□□□□ 0.75
ROPN1B-202ENST00000504401 LRRC9Q6ZRR7 1453 aa19.73■□□□□ 0.75
ROPN1B-202ENST00000504401 DISP1Q96F81 1524 aa19.7■□□□□ 0.74
ROPN1B-202ENST00000504401 UGGT2Q9NYU1 1516 aa19.7■□□□□ 0.74
ROPN1B-202ENST00000504401 PLEKHG5O94827 1062 aa19.69■□□□□ 0.74
ROPN1B-202ENST00000504401 ITGAEP38570 1179 aa19.68■□□□□ 0.74
ROPN1B-202ENST00000504401 JPH4Q96JJ6 628 aa19.67■□□□□ 0.74
ROPN1B-202ENST00000504401 NUP160Q12769 1436 aa19.67■□□□□ 0.74
ROPN1B-202ENST00000504401 MAP3K1Q13233 1512 aa19.67■□□□□ 0.74
ROPN1B-202ENST00000504401 PHLDB1Q86UU1 1377 aa19.66■□□□□ 0.74
ROPN1B-202ENST00000504401 CFAP43Q8NDM7 1665 aa19.64■□□□□ 0.74
ROPN1B-202ENST00000504401 LRRIQ1Q96JM4 1722 aa19.64■□□□□ 0.74
ROPN1B-202ENST00000504401 KIAA0556O60303 1618 aa19.64■□□□□ 0.73
ROPN1B-202ENST00000504401 CLSPNQ9HAW4 1339 aa19.62■□□□□ 0.73
ROPN1B-202ENST00000504401 CCNB3Q8WWL7 1395 aa19.61■□□□□ 0.73
ROPN1B-202ENST00000504401 MTUS2Q5JR59 1369 aa19.61■□□□□ 0.73
ROPN1B-202ENST00000504401 RRBP1Q9P2E9 1410 aaKnown RBP19.61■□□□□ 0.73
ROPN1B-202ENST00000504401 CDK13Q14004 1512 aaKnown RBP19.57■□□□□ 0.72
ROPN1B-202ENST00000504401 FAM50AQ14320 339 aaKnown RBP19.57■□□□□ 0.72
ROPN1B-202ENST00000504401 CHD1O14646 1710 aa19.57■□□□□ 0.72
ROPN1B-202ENST00000504401 MAGI3Q5TCQ9 1506 aa19.55■□□□□ 0.72
ROPN1B-202ENST00000504401 TSHZ2Q9NRE2 1034 aa19.55■□□□□ 0.72
ROPN1B-202ENST00000504401 EPRSP07814 1512 aaKnown RBP19.54■□□□□ 0.72
ROPN1B-202ENST00000504401 ERICH6BQ5W0A0 696 aa19.54■□□□□ 0.72
ROPN1B-202ENST00000504401 PLB1Q6P1J6 1458 aa19.54■□□□□ 0.72
ROPN1B-202ENST00000504401 PODXL2Q9NZ53 605 aa19.53■□□□□ 0.72
ROPN1B-202ENST00000504401 HECW1Q76N89 1606 aa19.52■□□□□ 0.71
ROPN1B-202ENST00000504401 CARMIL2Q6F5E8 1435 aa19.51■□□□□ 0.71
ROPN1B-202ENST00000504401 PKNOX2Q96KN3 472 aa19.51■□□□□ 0.71
ROPN1B-202ENST00000504401 PRG4Q92954 1404 aaPredicted RBP19.51■□□□□ 0.71
ROPN1B-202ENST00000504401 NUP153P49790 1475 aaKnown RBP19.49■□□□□ 0.71
ROPN1B-202ENST00000504401 NCOA2Q15596 1464 aa19.47■□□□□ 0.71
ROPN1B-202ENST00000504401 CCDC18Q5T9S5 1454 aa19.47■□□□□ 0.71
ROPN1B-202ENST00000504401 MYT1LQ9UL68 1186 aa19.45■□□□□ 0.7
ROPN1B-202ENST00000504401 RAPGEF6Q8TEU7 1601 aa19.45■□□□□ 0.7
ROPN1B-202ENST00000504401 EHBP1L1Q8N3D4 1523 aa19.42■□□□□ 0.7
ROPN1B-202ENST00000504401 ERCC6L2Q5T890 1561 aa19.42■□□□□ 0.7
ROPN1B-202ENST00000504401 FGD6Q6ZV73 1430 aa19.42■□□□□ 0.7
ROPN1B-202ENST00000504401 SUPT16HQ9Y5B9 1047 aaKnown RBP19.4■□□□□ 0.7
ROPN1B-202ENST00000504401 SALL2Q9Y467 1007 aaPredicted RBP19.39■□□□□ 0.69
ROPN1B-202ENST00000504401 PTPRGP23470 1445 aa19.39■□□□□ 0.69
ROPN1B-202ENST00000504401 SUPT6HQ7KZ85 1726 aaKnown RBP19.38■□□□□ 0.69
ROPN1B-202ENST00000504401 MYOM3Q5VTT5 1437 aa19.37■□□□□ 0.69
ROPN1B-202ENST00000504401 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
ROPN1B-202ENST00000504401 PTPRKQ15262 1439 aa19.32■□□□□ 0.68
ROPN1B-202ENST00000504401 CDK11AQ9UQ88 783 aaPredicted RBP19.32■□□□□ 0.68
ROPN1B-202ENST00000504401 RAB3GAP2Q9H2M9 1393 aa19.32■□□□□ 0.68
ROPN1B-202ENST00000504401 ABCA8O94911 1581 aa19.31■□□□□ 0.68
ROPN1B-202ENST00000504401 SHROOM2Q13796 1616 aa19.31■□□□□ 0.68
ROPN1B-202ENST00000504401 ATP10BO94823 1461 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms