RNA–Protein interactions for RNA: ENST00000504401.1

ROPN1B-202, Transcript of rhophilin associated tail protein 1B, humanhuman

TSL 1 (best) BASIC

Gene ROPN1B, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROPN1B-202ENST00000504401 NISCHQ9Y2I1 1504 aa28.95■■■□□ 2.22
ROPN1B-202ENST00000504401 CCDC180Q9P1Z9 1646 aa24.96■■□□□ 1.59
ROPN1B-202ENST00000504401 ZCCHC6Q5VYS8 1495 aaKnown RBP24.32■■□□□ 1.48
ROPN1B-202ENST00000504401 DCAF8L2P0C7V8 631 aa24.3■■□□□ 1.48
ROPN1B-202ENST00000504401 SHROOM4Q9ULL8 1493 aa24.12■■□□□ 1.45
ROPN1B-202ENST00000504401 PELP1Q8IZL8 1130 aaKnown RBP24.02■■□□□ 1.44
ROPN1B-202ENST00000504401 ABCC9O60706 1549 aa23.91■■□□□ 1.42
ROPN1B-202ENST00000504401 DCAF1Q9Y4B6 1507 aa23.73■■□□□ 1.39
ROPN1B-202ENST00000504401 MYT1Q01538 1121 aa23.72■■□□□ 1.39
ROPN1B-202ENST00000504401 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
ROPN1B-202ENST00000504401 SCRIBQ14160 1630 aa23.31■■□□□ 1.32
ROPN1B-202ENST00000504401 NACADO15069 1562 aa23.29■■□□□ 1.32
ROPN1B-202ENST00000504401 SUPT5HO00267 1087 aaKnown RBP23.25■■□□□ 1.31
ROPN1B-202ENST00000504401 RB1CC1Q8TDY2 1594 aa23.11■■□□□ 1.29
ROPN1B-202ENST00000504401 TTBK1Q5TCY1 1321 aaPredicted RBP22.92■■□□□ 1.26
ROPN1B-202ENST00000504401 PABPN1Q86U42 306 aaKnown RBP eCLIP22.71■■□□□ 1.23
ROPN1B-202ENST00000504401 UNC13AQ9UPW8 1703 aa22.7■■□□□ 1.23
ROPN1B-202ENST00000504401 CECR2Q9BXF3 1484 aa22.67■■□□□ 1.22
ROPN1B-202ENST00000504401 RSF1Q96T23 1441 aaPredicted RBP22.6■■□□□ 1.21
ROPN1B-202ENST00000504401 BICRAQ9NZM4 1560 aa22.51■■□□□ 1.19
ROPN1B-202ENST00000504401 MROH2BQ7Z745 1585 aa22.48■■□□□ 1.19
ROPN1B-202ENST00000504401 HRCP23327 699 aa22.31■■□□□ 1.16
ROPN1B-202ENST00000504401 WIZO95785 1651 aa22.31■■□□□ 1.16
ROPN1B-202ENST00000504401 BAZ1AQ9NRL2 1556 aaPredicted RBP22.28■■□□□ 1.16
ROPN1B-202ENST00000504401 SMARCA4P51532 1647 aa22.21■■□□□ 1.15
ROPN1B-202ENST00000504401 CHIC1Q5VXU3 224 aa22.18■■□□□ 1.14
ROPN1B-202ENST00000504401 PRKCSHP14314 528 aaPredicted RBP22.02■■□□□ 1.11
ROPN1B-202ENST00000504401 TOP2AP11388 1531 aaKnown RBP21.93■■□□□ 1.1
ROPN1B-202ENST00000504401 ATAD2BQ9ULI0 1458 aa21.87■■□□□ 1.09
ROPN1B-202ENST00000504401 PCGF6Q9BYE7 350 aa21.86■■□□□ 1.09
ROPN1B-202ENST00000504401 CCDC88BA6NC98 1476 aa21.84■■□□□ 1.09
ROPN1B-202ENST00000504401 EIF4G1Q04637 1599 aaKnown RBP21.82■■□□□ 1.08
ROPN1B-202ENST00000504401 PEG3Q9GZU2 1588 aa21.81■■□□□ 1.08
ROPN1B-202ENST00000504401 SMARCA2P51531 1590 aa21.79■■□□□ 1.08
ROPN1B-202ENST00000504401 BAZ1BQ9UIG0 1483 aaKnown RBP21.75■■□□□ 1.07
ROPN1B-202ENST00000504401 APLP2Q06481 763 aa21.73■■□□□ 1.07
ROPN1B-202ENST00000504401 ERICH6Q7L0X2 663 aa21.73■■□□□ 1.07
ROPN1B-202ENST00000504401 TRIM41Q8WV44 630 aa21.7■■□□□ 1.06
ROPN1B-202ENST00000504401 PPARGC1BQ86YN6 1023 aaKnown RBP21.65■■□□□ 1.06
ROPN1B-202ENST00000504401 DNAJC5BQ9UF47 199 aa21.64■■□□□ 1.05
ROPN1B-202ENST00000504401 SCAF1Q9H7N4 1312 aaKnown RBP21.61■■□□□ 1.05
ROPN1B-202ENST00000504401 NCAPD3P42695 1498 aa21.58■■□□□ 1.04
ROPN1B-202ENST00000504401 FAM9AQ8IZU1 332 aaPredicted RBP21.52■■□□□ 1.04
ROPN1B-202ENST00000504401 ABCC8Q09428 1581 aa21.52■■□□□ 1.04
ROPN1B-202ENST00000504401 LOC105371045A0A1W2PR82 267 aa21.52■■□□□ 1.04
ROPN1B-202ENST00000504401 SLC24A1O60721 1099 aa21.51■■□□□ 1.03
ROPN1B-202ENST00000504401 CC2D2AQ9P2K1 1620 aa21.5■■□□□ 1.03
ROPN1B-202ENST00000504401 HMGXB3Q12766 1538 aa21.48■■□□□ 1.03
ROPN1B-202ENST00000504401 BCL11AQ9H165 835 aa21.48■■□□□ 1.03
ROPN1B-202ENST00000504401 EHMT2Q96KQ7 1210 aa21.4■■□□□ 1.02
ROPN1B-202ENST00000504401 TRIM26Q12899 539 aaPredicted RBP21.35■■□□□ 1.01
ROPN1B-202ENST00000504401 WRNQ14191 1432 aaPredicted RBP eCLIP21.25■□□□□ 0.99
ROPN1B-202ENST00000504401 ZEB1P37275 1124 aaPredicted RBP21.24■□□□□ 0.99
ROPN1B-202ENST00000504401 SYNJ1O43426 1573 aa21.18■□□□□ 0.98
ROPN1B-202ENST00000504401 CFTRP13569 1480 aa21.18■□□□□ 0.98
ROPN1B-202ENST00000504401 SOGA1O94964 1423 aa21.17■□□□□ 0.98
ROPN1B-202ENST00000504401 CADPSQ9ULU8 1353 aa21.12■□□□□ 0.97
ROPN1B-202ENST00000504401 RUSC2Q8N2Y8 1516 aa21.11■□□□□ 0.97
ROPN1B-202ENST00000504401 NESP48681 1621 aa21.05■□□□□ 0.96
ROPN1B-202ENST00000504401 CUX1P39880 1505 aa20.98■□□□□ 0.95
ROPN1B-202ENST00000504401 TOP2BQ02880 1626 aa20.96■□□□□ 0.95
ROPN1B-202ENST00000504401 CSRNP3Q8WYN3 585 aa20.95■□□□□ 0.94
ROPN1B-202ENST00000504401 CENPBP07199 599 aaPredicted RBP20.91■□□□□ 0.94
ROPN1B-202ENST00000504401 FANCD2Q9BXW9 1451 aa20.91■□□□□ 0.94
ROPN1B-202ENST00000504401 BIVM-ERCC5R4GMW8 1640 aa20.89■□□□□ 0.93
ROPN1B-202ENST00000504401 PRDM2Q13029 1718 aa20.87■□□□□ 0.93
ROPN1B-202ENST00000504401 EEA1Q15075 1411 aa20.83■□□□□ 0.93
ROPN1B-202ENST00000504401 UBTFP17480 764 aaKnown RBP20.8■□□□□ 0.92
ROPN1B-202ENST00000504401 LAMC3Q9Y6N6 1575 aa20.77■□□□□ 0.92
ROPN1B-202ENST00000504401 DAXXQ9UER7 740 aaPredicted RBP20.76■□□□□ 0.91
ROPN1B-202ENST00000504401 FGD5Q6ZNL6 1462 aa20.74■□□□□ 0.91
ROPN1B-202ENST00000504401 CEP164Q9UPV0 1460 aa20.71■□□□□ 0.91
ROPN1B-202ENST00000504401 ACIN1Q9UKV3 1341 aaKnown RBP20.69■□□□□ 0.9
ROPN1B-202ENST00000504401 GOLGA3Q08378 1498 aa20.68■□□□□ 0.9
ROPN1B-202ENST00000504401 PDS5BQ9NTI5 1447 aa20.68■□□□□ 0.9
ROPN1B-202ENST00000504401 RAPGEF2Q9Y4G8 1499 aa20.68■□□□□ 0.9
ROPN1B-202ENST00000504401 TOPBP1Q92547 1522 aa20.67■□□□□ 0.9
ROPN1B-202ENST00000504401 RANGAP1P46060 587 aaPredicted RBP20.66■□□□□ 0.9
ROPN1B-202ENST00000504401 URB2Q14146 1524 aaKnown RBP20.66■□□□□ 0.9
ROPN1B-202ENST00000504401 CUX2O14529 1486 aa20.66■□□□□ 0.9
ROPN1B-202ENST00000504401 RAD54L2Q9Y4B4 1467 aa20.66■□□□□ 0.9
ROPN1B-202ENST00000504401 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
ROPN1B-202ENST00000504401 TNIKQ9UKE5 1360 aa20.65■□□□□ 0.9
ROPN1B-202ENST00000504401 CEP162Q5TB80 1403 aa20.64■□□□□ 0.89
ROPN1B-202ENST00000504401 DNMBPQ6XZF7 1577 aa20.63■□□□□ 0.89
ROPN1B-202ENST00000504401 KIF21AQ7Z4S6 1674 aa20.63■□□□□ 0.89
ROPN1B-202ENST00000504401 POLA1P09884 1462 aaPredicted RBP20.61■□□□□ 0.89
ROPN1B-202ENST00000504401 KIF21BO75037 1637 aa20.6■□□□□ 0.89
ROPN1B-202ENST00000504401 PRXQ9BXM0 1461 aa20.55■□□□□ 0.88
ROPN1B-202ENST00000504401 IGF1RP08069 1367 aa20.54■□□□□ 0.88
ROPN1B-202ENST00000504401 ANP32EQ9BTT0 268 aa20.48■□□□□ 0.87
ROPN1B-202ENST00000504401 TDRD9Q8NDG6 1382 aaKnown RBP20.47■□□□□ 0.87
ROPN1B-202ENST00000504401 ABCA10Q8WWZ4 1543 aa20.46■□□□□ 0.87
ROPN1B-202ENST00000504401 CLIP1P30622 1438 aa20.43■□□□□ 0.86
ROPN1B-202ENST00000504401 CARMIL1Q5VZK9 1371 aa20.43■□□□□ 0.86
ROPN1B-202ENST00000504401 GTF3C3Q9Y5Q9 886 aa20.42■□□□□ 0.86
ROPN1B-202ENST00000504401 ERICH3Q5RHP9 1530 aa20.42■□□□□ 0.86
ROPN1B-202ENST00000504401 NEUROD1Q13562 356 aa20.41■□□□□ 0.86
ROPN1B-202ENST00000504401 MRC2Q9UBG0 1479 aa20.41■□□□□ 0.86
ROPN1B-202ENST00000504401 ERCC6Q03468 1493 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms