RNA–Protein interactions for RNA: ENST00000504309.5

SDHA-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-204ENST00000504309 EFCAB5A4FU69 1503 aa27.16■■□□□ 1.94
SDHA-204ENST00000504309 MAP3K1Q13233 1512 aa27.15■■□□□ 1.94
SDHA-204ENST00000504309 PBRM1Q86U86 1689 aa27.15■■□□□ 1.94
SDHA-204ENST00000504309 CFAP43Q8NDM7 1665 aa27.15■■□□□ 1.94
SDHA-204ENST00000504309 RRBP1Q9P2E9 1410 aaKnown RBP27.12■■□□□ 1.93
SDHA-204ENST00000504309 MRC2Q9UBG0 1479 aa27.11■■□□□ 1.93
SDHA-204ENST00000504309 FHAD1B1AJZ9 1412 aa27.1■■□□□ 1.93
SDHA-204ENST00000504309 FHOD3Q2V2M9 1422 aa27.08■■□□□ 1.93
SDHA-204ENST00000504309 P3H3Q8IVL6 736 aa27.04■■□□□ 1.92
SDHA-204ENST00000504309 SAMD9Q5K651 1589 aa27.02■■□□□ 1.92
SDHA-204ENST00000504309 LRRC9Q6ZRR7 1453 aa27.01■■□□□ 1.92
SDHA-204ENST00000504309 FYCO1Q9BQS8 1478 aa27■■□□□ 1.91
SDHA-204ENST00000504309 WDR62O43379 1518 aa26.97■■□□□ 1.91
SDHA-204ENST00000504309 CCNB3Q8WWL7 1395 aa26.97■■□□□ 1.91
SDHA-204ENST00000504309 AQRO60306 1485 aaKnown RBP eCLIP26.96■■□□□ 1.911e-7■■■■■ 30.9
SDHA-204ENST00000504309 ADAMTS12P58397 1594 aa26.96■■□□□ 1.91
SDHA-204ENST00000504309 CASKIN1Q8WXD9 1431 aa26.93■■□□□ 1.9
SDHA-204ENST00000504309 LRRIQ1Q96JM4 1722 aa26.91■■□□□ 1.9
SDHA-204ENST00000504309 SNAPC4Q5SXM2 1469 aa26.9■■□□□ 1.9
SDHA-204ENST00000504309 FMN1Q68DA7 1419 aa26.88■■□□□ 1.89
SDHA-204ENST00000504309 IFT140Q96RY7 1462 aa26.85■■□□□ 1.89
SDHA-204ENST00000504309 PHLDB1Q86UU1 1377 aa26.85■■□□□ 1.89
SDHA-204ENST00000504309 GRIN2BQ13224 1484 aa26.83■■□□□ 1.89
SDHA-204ENST00000504309 ZNF608Q9ULD9 1512 aaPredicted RBP26.83■■□□□ 1.89
SDHA-204ENST00000504309 ATP1B4Q9UN42 357 aaPredicted RBP26.82■■□□□ 1.88
SDHA-204ENST00000504309 THOC2Q8NI27 1593 aaKnown RBP26.81■■□□□ 1.88
SDHA-204ENST00000504309 IQGAP2Q13576 1575 aa26.8■■□□□ 1.88
SDHA-204ENST00000504309 DHX57Q6P158 1386 aaKnown RBP26.79■■□□□ 1.88
SDHA-204ENST00000504309 EIF4G3O43432 1585 aaKnown RBP26.78■■□□□ 1.88
SDHA-204ENST00000504309 ERCC6Q03468 1493 aa26.76■■□□□ 1.87
SDHA-204ENST00000504309 ITGAEP38570 1179 aa26.72■■□□□ 1.87
SDHA-204ENST00000504309 CLSPNQ9HAW4 1339 aa26.68■■□□□ 1.86
SDHA-204ENST00000504309 SUPT6HQ7KZ85 1726 aaKnown RBP26.62■■□□□ 1.85
SDHA-204ENST00000504309 HECW1Q76N89 1606 aa26.62■■□□□ 1.85
SDHA-204ENST00000504309 UGGT2Q9NYU1 1516 aa26.62■■□□□ 1.85
SDHA-204ENST00000504309 RAB3GAP2Q9H2M9 1393 aa26.61■■□□□ 1.85
SDHA-204ENST00000504309 MTUS2Q5JR59 1369 aa26.61■■□□□ 1.85
SDHA-204ENST00000504309 EHBP1L1Q8N3D4 1523 aa26.6■■□□□ 1.85
SDHA-204ENST00000504309 FAM50AQ14320 339 aaKnown RBP26.6■■□□□ 1.85
SDHA-204ENST00000504309 DIEXFQ68CQ4 756 aaKnown RBP26.59■■□□□ 1.85
SDHA-204ENST00000504309 ZNF316A6NFI3 1004 aaPredicted RBP26.58■■□□□ 1.85
SDHA-204ENST00000504309 GRIN2AQ12879 1464 aa26.58■■□□□ 1.85
SDHA-204ENST00000504309 FGD6Q6ZV73 1430 aa26.57■■□□□ 1.84
SDHA-204ENST00000504309 CCDC18Q5T9S5 1454 aa26.56■■□□□ 1.84
SDHA-204ENST00000504309 MAGI3Q5TCQ9 1506 aa26.56■■□□□ 1.84
SDHA-204ENST00000504309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.56■■□□□ 1.84
SDHA-204ENST00000504309 SETD5Q9C0A6 1442 aa26.55■■□□□ 1.84
SDHA-204ENST00000504309 NCOA2Q15596 1464 aa26.54■■□□□ 1.84
SDHA-204ENST00000504309 KIAA0556O60303 1618 aa26.54■■□□□ 1.84
SDHA-204ENST00000504309 KIAA0586Q9BVV6 1533 aa26.53■■□□□ 1.84
SDHA-204ENST00000504309 MAGI1Q96QZ7 1491 aaPredicted RBP26.52■■□□□ 1.84
SDHA-204ENST00000504309 MAPKBP1O60336 1514 aa26.51■■□□□ 1.83
SDHA-204ENST00000504309 ARHGEF11O15085 1522 aa26.49■■□□□ 1.83
SDHA-204ENST00000504309 DISP1Q96F81 1524 aa26.49■■□□□ 1.83
SDHA-204ENST00000504309 EPRSP07814 1512 aaKnown RBP26.48■■□□□ 1.83
SDHA-204ENST00000504309 MYOM3Q5VTT5 1437 aa26.47■■□□□ 1.83
SDHA-204ENST00000504309 CEP170Q5SW79 1584 aa26.46■■□□□ 1.83
SDHA-204ENST00000504309 CDK13Q14004 1512 aaKnown RBP26.46■■□□□ 1.83
SDHA-204ENST00000504309 SYNJ2O15056 1496 aa26.44■■□□□ 1.82
SDHA-204ENST00000504309 PTPN23Q9H3S7 1636 aa26.43■■□□□ 1.82
SDHA-204ENST00000504309 RAPGEF6Q8TEU7 1601 aa26.38■■□□□ 1.81
SDHA-204ENST00000504309 PTPRKQ15262 1439 aa26.36■■□□□ 1.81
SDHA-204ENST00000504309 CHMP7Q8WUX9 453 aaPredicted RBP26.31■■□□□ 1.8
SDHA-204ENST00000504309 NUP153P49790 1475 aaKnown RBP26.31■■□□□ 1.8
SDHA-204ENST00000504309 TCOF1Q13428 1488 aaKnown RBP26.3■■□□□ 1.8
SDHA-204ENST00000504309 NUP160Q12769 1436 aa26.3■■□□□ 1.8
SDHA-204ENST00000504309 HFM1A2PYH4 1435 aa26.29■■□□□ 1.8
SDHA-204ENST00000504309 ARID3CA6NKF2 412 aa26.27■■□□□ 1.8
SDHA-204ENST00000504309 GCC2Q8IWJ2 1684 aa26.24■■□□□ 1.79
SDHA-204ENST00000504309 FBLN2P98095 1184 aa26.24■■□□□ 1.79
SDHA-204ENST00000504309 NAIPQ13075 1403 aa26.21■■□□□ 1.79
SDHA-204ENST00000504309 MIA2Q96PC5 1412 aa26.19■■□□□ 1.78
SDHA-204ENST00000504309 PLB1Q6P1J6 1458 aa26.17■■□□□ 1.78
SDHA-204ENST00000504309 UACAQ9BZF9 1416 aa26.15■■□□□ 1.78
SDHA-204ENST00000504309 SIN3AQ96ST3 1273 aa26.14■■□□□ 1.77
SDHA-204ENST00000504309 CARMIL2Q6F5E8 1435 aa26.14■■□□□ 1.77
SDHA-204ENST00000504309 CHD1O14646 1710 aa26.13■■□□□ 1.77
SDHA-204ENST00000504309 JPH4Q96JJ6 628 aa26.1■■□□□ 1.77
SDHA-204ENST00000504309 ADCY10Q96PN6 1610 aa26.1■■□□□ 1.77
SDHA-204ENST00000504309 MIER1Q8N108 512 aa26.09■■□□□ 1.77
SDHA-204ENST00000504309 AKNAQ7Z591 1439 aa26.09■■□□□ 1.77
SDHA-204ENST00000504309 KDM6BO15054 1643 aa26.08■■□□□ 1.77
SDHA-204ENST00000504309 ITSN2Q9NZM3 1697 aa26.08■■□□□ 1.77
SDHA-204ENST00000504309 DNMT1P26358 1616 aaKnown RBP26.08■■□□□ 1.77
SDHA-204ENST00000504309 NEUROD1Q13562 356 aa26.07■■□□□ 1.76
SDHA-204ENST00000504309 KIF14Q15058 1648 aa26.07■■□□□ 1.76
SDHA-204ENST00000504309 ABCA8O94911 1581 aa26.06■■□□□ 1.76
SDHA-204ENST00000504309 TROQ12816 1431 aaPredicted RBP26.05■■□□□ 1.76
SDHA-204ENST00000504309 PRG4Q92954 1404 aaPredicted RBP26.05■■□□□ 1.76
SDHA-204ENST00000504309 CHIC2Q9UKJ5 165 aa26.03■■□□□ 1.76
SDHA-204ENST00000504309 RRP7BPQ9NSQ0 103 aa26.02■■□□□ 1.76
SDHA-204ENST00000504309 CDK11AQ9UQ88 783 aaPredicted RBP26.02■■□□□ 1.76
SDHA-204ENST00000504309 DAPK1P53355 1430 aa26■■□□□ 1.75
SDHA-204ENST00000504309 TIMELESSQ9UNS1 1208 aa25.99■■□□□ 1.75
SDHA-204ENST00000504309 SCAF1Q9H7N4 1312 aaKnown RBP25.98■■□□□ 1.75
SDHA-204ENST00000504309 ACIN1Q9UKV3 1341 aaKnown RBP25.97■■□□□ 1.75
SDHA-204ENST00000504309 CDC42BPAQ5VT25 1732 aa25.95■■□□□ 1.74
SDHA-204ENST00000504309 ABCC5O15440 1437 aa25.94■■□□□ 1.74
SDHA-204ENST00000504309 DENND4BO75064 1496 aaPredicted RBP25.94■■□□□ 1.74
SDHA-204ENST00000504309 CROCC2H7BZ55 1655 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms