RNA–Protein interactions for RNA: ENST00000503042.5

CLPTM1L-202, Transcript of CLPTM1 like, humanhuman

TSL 2

Gene CLPTM1L, Length 3,540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-202ENST00000503042 CTTNBP2Q8WZ74 1663 aa17.03■□□□□ 0.32
CLPTM1L-202ENST00000503042 ZNF608Q9ULD9 1512 aaPredicted RBP17.01■□□□□ 0.31
CLPTM1L-202ENST00000503042 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
CLPTM1L-202ENST00000503042 APLP2Q06481 763 aa16.98■□□□□ 0.31
CLPTM1L-202ENST00000503042 ZEB1P37275 1124 aaPredicted RBP16.98■□□□□ 0.31
CLPTM1L-202ENST00000503042 GRIN2BQ13224 1484 aa16.96■□□□□ 0.31
CLPTM1L-202ENST00000503042 ADAMTS12P58397 1594 aa16.95■□□□□ 0.3
CLPTM1L-202ENST00000503042 FHAD1B1AJZ9 1412 aa16.95■□□□□ 0.3
CLPTM1L-202ENST00000503042 EIF4G3O43432 1585 aaKnown RBP16.92■□□□□ 0.3
CLPTM1L-202ENST00000503042 EFCAB5A4FU69 1503 aa16.92■□□□□ 0.3
CLPTM1L-202ENST00000503042 P3H3Q8IVL6 736 aa16.91■□□□□ 0.3
CLPTM1L-202ENST00000503042 KANK4Q5T7N3 995 aaPredicted RBP16.91■□□□□ 0.3
CLPTM1L-202ENST00000503042 FHOD3Q2V2M9 1422 aa16.9■□□□□ 0.3
CLPTM1L-202ENST00000503042 SAMD9Q5K651 1589 aa16.87■□□□□ 0.29
CLPTM1L-202ENST00000503042 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
CLPTM1L-202ENST00000503042 PCF11O94913 1555 aaKnown RBP16.86■□□□□ 0.29
CLPTM1L-202ENST00000503042 TIAM1Q13009 1591 aa16.84■□□□□ 0.29
CLPTM1L-202ENST00000503042 MAP3K1Q13233 1512 aa16.83■□□□□ 0.29
CLPTM1L-202ENST00000503042 CCER1Q8TC90 406 aaPredicted RBP16.8■□□□□ 0.28
CLPTM1L-202ENST00000503042 IQGAP2Q13576 1575 aa16.8■□□□□ 0.28
CLPTM1L-202ENST00000503042 FYCO1Q9BQS8 1478 aa16.79■□□□□ 0.28
CLPTM1L-202ENST00000503042 CASKIN1Q8WXD9 1431 aa16.79■□□□□ 0.28
CLPTM1L-202ENST00000503042 CFAP43Q8NDM7 1665 aa16.78■□□□□ 0.28
CLPTM1L-202ENST00000503042 MAGI1Q96QZ7 1491 aaPredicted RBP16.78■□□□□ 0.28
CLPTM1L-202ENST00000503042 GRIN2AQ12879 1464 aa16.78■□□□□ 0.28
CLPTM1L-202ENST00000503042 FMN1Q68DA7 1419 aa16.77■□□□□ 0.28
CLPTM1L-202ENST00000503042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.27
CLPTM1L-202ENST00000503042 LRRC9Q6ZRR7 1453 aa16.76■□□□□ 0.27
CLPTM1L-202ENST00000503042 SYNJ2O15056 1496 aa16.74■□□□□ 0.27
CLPTM1L-202ENST00000503042 HNRNPUL2Q1KMD3 747 aaKnown RBP16.73■□□□□ 0.27
CLPTM1L-202ENST00000503042 ATP1B4Q9UN42 357 aaPredicted RBP16.73■□□□□ 0.27
CLPTM1L-202ENST00000503042 RRBP1Q9P2E9 1410 aaKnown RBP16.73■□□□□ 0.27
CLPTM1L-202ENST00000503042 KIAA0586Q9BVV6 1533 aa16.72■□□□□ 0.27
CLPTM1L-202ENST00000503042 UGGT2Q9NYU1 1516 aa16.72■□□□□ 0.27
CLPTM1L-202ENST00000503042 YTHDC1Q96MU7 727 aaKnown RBP16.71■□□□□ 0.27
CLPTM1L-202ENST00000503042 LRRIQ1Q96JM4 1722 aa16.71■□□□□ 0.27
CLPTM1L-202ENST00000503042 CEP170Q5SW79 1584 aa16.7■□□□□ 0.26
CLPTM1L-202ENST00000503042 CHMP7Q8WUX9 453 aaPredicted RBP16.69■□□□□ 0.26
CLPTM1L-202ENST00000503042 DISP1Q96F81 1524 aa16.66■□□□□ 0.26
CLPTM1L-202ENST00000503042 CCNB3Q8WWL7 1395 aa16.65■□□□□ 0.26
CLPTM1L-202ENST00000503042 PHLDB1Q86UU1 1377 aa16.65■□□□□ 0.26
CLPTM1L-202ENST00000503042 FBLN2P98095 1184 aa16.65■□□□□ 0.26
CLPTM1L-202ENST00000503042 KIAA0556O60303 1618 aa16.64■□□□□ 0.26
CLPTM1L-202ENST00000503042 NUP160Q12769 1436 aa16.64■□□□□ 0.25
CLPTM1L-202ENST00000503042 GTF3C3Q9Y5Q9 886 aa16.62■□□□□ 0.25
CLPTM1L-202ENST00000503042 HECW1Q76N89 1606 aa16.59■□□□□ 0.25
CLPTM1L-202ENST00000503042 CCDC18Q5T9S5 1454 aa16.56■□□□□ 0.24
CLPTM1L-202ENST00000503042 MTUS2Q5JR59 1369 aa16.56■□□□□ 0.24
CLPTM1L-202ENST00000503042 MAGI3Q5TCQ9 1506 aa16.56■□□□□ 0.24
CLPTM1L-202ENST00000503042 NEUROD1Q13562 356 aa16.56■□□□□ 0.24
CLPTM1L-202ENST00000503042 EPRSP07814 1512 aaKnown RBP16.55■□□□□ 0.24
CLPTM1L-202ENST00000503042 JPH4Q96JJ6 628 aa16.53■□□□□ 0.24
CLPTM1L-202ENST00000503042 EHBP1L1Q8N3D4 1523 aa16.53■□□□□ 0.24
CLPTM1L-202ENST00000503042 CHD1O14646 1710 aa16.52■□□□□ 0.24
CLPTM1L-202ENST00000503042 CDK13Q14004 1512 aaKnown RBP16.52■□□□□ 0.24
CLPTM1L-202ENST00000503042 NCOA2Q15596 1464 aa16.51■□□□□ 0.23
CLPTM1L-202ENST00000503042 ITGAEP38570 1179 aa16.5■□□□□ 0.23
CLPTM1L-202ENST00000503042 SUPT6HQ7KZ85 1726 aaKnown RBP16.5■□□□□ 0.23
CLPTM1L-202ENST00000503042 RAPGEF6Q8TEU7 1601 aa16.5■□□□□ 0.23
CLPTM1L-202ENST00000503042 NUP153P49790 1475 aaKnown RBP16.49■□□□□ 0.23
CLPTM1L-202ENST00000503042 ARHGEF11O15085 1522 aa16.48■□□□□ 0.23
CLPTM1L-202ENST00000503042 FAM50AQ14320 339 aaKnown RBP16.48■□□□□ 0.23
CLPTM1L-202ENST00000503042 CARMIL2Q6F5E8 1435 aa16.48■□□□□ 0.23
CLPTM1L-202ENST00000503042 FGD6Q6ZV73 1430 aa16.48■□□□□ 0.23
CLPTM1L-202ENST00000503042 ARID3CA6NKF2 412 aa16.47■□□□□ 0.23
CLPTM1L-202ENST00000503042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.46■□□□□ 0.236e-11■□□□□ 8.5
CLPTM1L-202ENST00000503042 PLB1Q6P1J6 1458 aa16.45■□□□□ 0.22
CLPTM1L-202ENST00000503042 MYOM3Q5VTT5 1437 aa16.44■□□□□ 0.22
CLPTM1L-202ENST00000503042 DHX57Q6P158 1386 aaKnown RBP16.42■□□□□ 0.22
CLPTM1L-202ENST00000503042 PRG4Q92954 1404 aaPredicted RBP16.41■□□□□ 0.22
CLPTM1L-202ENST00000503042 RAB3GAP2Q9H2M9 1393 aa16.39■□□□□ 0.21
CLPTM1L-202ENST00000503042 SHROOM2Q13796 1616 aa16.39■□□□□ 0.21
CLPTM1L-202ENST00000503042 ABCA8O94911 1581 aa16.39■□□□□ 0.21
CLPTM1L-202ENST00000503042 PTPN23Q9H3S7 1636 aa16.38■□□□□ 0.21
CLPTM1L-202ENST00000503042 SETD5Q9C0A6 1442 aa16.37■□□□□ 0.21
CLPTM1L-202ENST00000503042 DIEXFQ68CQ4 756 aaKnown RBP16.37■□□□□ 0.21
CLPTM1L-202ENST00000503042 PRKCSHP14314 528 aaPredicted RBP16.36■□□□□ 0.21
CLPTM1L-202ENST00000503042 PTPRKQ15262 1439 aa16.36■□□□□ 0.21
CLPTM1L-202ENST00000503042 ACIN1Q9UKV3 1341 aaKnown RBP16.35■□□□□ 0.21
CLPTM1L-202ENST00000503042 TCOF1Q13428 1488 aaKnown RBP16.35■□□□□ 0.21
CLPTM1L-202ENST00000503042 CLSPNQ9HAW4 1339 aa16.33■□□□□ 0.2
CLPTM1L-202ENST00000503042 CDK11AQ9UQ88 783 aaPredicted RBP16.32■□□□□ 0.2
CLPTM1L-202ENST00000503042 PTPRGP23470 1445 aa16.32■□□□□ 0.2
CLPTM1L-202ENST00000503042 CLASP1Q7Z460 1538 aa16.31■□□□□ 0.2
CLPTM1L-202ENST00000503042 TROQ12816 1431 aaPredicted RBP16.31■□□□□ 0.2
CLPTM1L-202ENST00000503042 MIA2Q96PC5 1412 aa16.31■□□□□ 0.2
CLPTM1L-202ENST00000503042 ERCC6L2Q5T890 1561 aa16.31■□□□□ 0.2
CLPTM1L-202ENST00000503042 ATP10BO94823 1461 aa16.3■□□□□ 0.2
CLPTM1L-202ENST00000503042 ADCY10Q96PN6 1610 aa16.28■□□□□ 0.2
CLPTM1L-202ENST00000503042 KIF14Q15058 1648 aa16.28■□□□□ 0.2
CLPTM1L-202ENST00000503042 CENPBP07199 599 aaPredicted RBP16.27■□□□□ 0.19
CLPTM1L-202ENST00000503042 HFM1A2PYH4 1435 aa16.26■□□□□ 0.19
CLPTM1L-202ENST00000503042 MAPKBP1O60336 1514 aa16.26■□□□□ 0.19
CLPTM1L-202ENST00000503042 NAIPQ13075 1403 aa16.23■□□□□ 0.19
CLPTM1L-202ENST00000503042 UACAQ9BZF9 1416 aa16.23■□□□□ 0.19
CLPTM1L-202ENST00000503042 GPATCH8Q9UKJ3 1502 aaKnown RBP16.22■□□□□ 0.19
CLPTM1L-202ENST00000503042 ZNF644Q9H582 1327 aaPredicted RBP16.21■□□□□ 0.19
CLPTM1L-202ENST00000503042 PLEKHD1A6NEE1 506 aa16.21■□□□□ 0.19
CLPTM1L-202ENST00000503042 BCL11AQ9H165 835 aa16.21■□□□□ 0.19
CLPTM1L-202ENST00000503042 ITSN2Q9NZM3 1697 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms