RNA–Protein interactions for RNA: ENST00000503042.5

CLPTM1L-202, Transcript of CLPTM1 like, humanhuman

TSL 2

Gene CLPTM1L, Length 3,540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-202ENST00000503042 NISCHQ9Y2I1 1504 aa24.55■■□□□ 1.52
CLPTM1L-202ENST00000503042 CCDC180Q9P1Z9 1646 aa21.26■□□□□ 0.99
CLPTM1L-202ENST00000503042 ZCCHC6Q5VYS8 1495 aaKnown RBP20.66■□□□□ 0.9
CLPTM1L-202ENST00000503042 DCAF8L2P0C7V8 631 aa20.25■□□□□ 0.83
CLPTM1L-202ENST00000503042 DCAF1Q9Y4B6 1507 aa20.25■□□□□ 0.83
CLPTM1L-202ENST00000503042 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
CLPTM1L-202ENST00000503042 ABCC9O60706 1549 aa20■□□□□ 0.79
CLPTM1L-202ENST00000503042 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
CLPTM1L-202ENST00000503042 NACADO15069 1562 aa19.76■□□□□ 0.75
CLPTM1L-202ENST00000503042 SCRIBQ14160 1630 aa19.66■□□□□ 0.74
CLPTM1L-202ENST00000503042 SUPT5HO00267 1087 aaKnown RBP19.55■□□□□ 0.72
CLPTM1L-202ENST00000503042 RB1CC1Q8TDY2 1594 aa19.54■□□□□ 0.72
CLPTM1L-202ENST00000503042 UNC13AQ9UPW8 1703 aa19.24■□□□□ 0.67
CLPTM1L-202ENST00000503042 RSF1Q96T23 1441 aaPredicted RBP19.15■□□□□ 0.66
CLPTM1L-202ENST00000503042 CECR2Q9BXF3 1484 aa19.11■□□□□ 0.65
CLPTM1L-202ENST00000503042 BICRAQ9NZM4 1560 aa19.02■□□□□ 0.64
CLPTM1L-202ENST00000503042 MROH2BQ7Z745 1585 aa19.01■□□□□ 0.63
CLPTM1L-202ENST00000503042 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
CLPTM1L-202ENST00000503042 BAZ1AQ9NRL2 1556 aaPredicted RBP18.91■□□□□ 0.62
CLPTM1L-202ENST00000503042 WIZO95785 1651 aa18.88■□□□□ 0.61
CLPTM1L-202ENST00000503042 SMARCA4P51532 1647 aa18.83■□□□□ 0.6
CLPTM1L-202ENST00000503042 CHIC1Q5VXU3 224 aa18.82■□□□□ 0.6
CLPTM1L-202ENST00000503042 TOP2AP11388 1531 aaKnown RBP18.63■□□□□ 0.57
CLPTM1L-202ENST00000503042 PEG3Q9GZU2 1588 aa18.57■□□□□ 0.56
CLPTM1L-202ENST00000503042 SMARCA2P51531 1590 aa18.49■□□□□ 0.55
CLPTM1L-202ENST00000503042 CCDC88BA6NC98 1476 aa18.48■□□□□ 0.55
CLPTM1L-202ENST00000503042 ATAD2BQ9ULI0 1458 aa18.47■□□□□ 0.55
CLPTM1L-202ENST00000503042 EIF4G1Q04637 1599 aaKnown RBP18.44■□□□□ 0.54
CLPTM1L-202ENST00000503042 BAZ1BQ9UIG0 1483 aaKnown RBP18.36■□□□□ 0.53
CLPTM1L-202ENST00000503042 TRIM41Q8WV44 630 aa18.33■□□□□ 0.52
CLPTM1L-202ENST00000503042 NCAPD3P42695 1498 aa18.25■□□□□ 0.51
CLPTM1L-202ENST00000503042 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
CLPTM1L-202ENST00000503042 ABCC8Q09428 1581 aa18.19■□□□□ 0.5
CLPTM1L-202ENST00000503042 LOC105371045A0A1W2PR82 267 aa18.15■□□□□ 0.5
CLPTM1L-202ENST00000503042 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
CLPTM1L-202ENST00000503042 FAM9AQ8IZU1 332 aaPredicted RBP18.06■□□□□ 0.48
CLPTM1L-202ENST00000503042 WRNQ14191 1432 aaPredicted RBP eCLIP17.99■□□□□ 0.47
CLPTM1L-202ENST00000503042 PPARGC1BQ86YN6 1023 aaKnown RBP17.96■□□□□ 0.47
CLPTM1L-202ENST00000503042 SYNJ1O43426 1573 aa17.95■□□□□ 0.46
CLPTM1L-202ENST00000503042 CFTRP13569 1480 aa17.92■□□□□ 0.46
CLPTM1L-202ENST00000503042 SOGA1O94964 1423 aa17.88■□□□□ 0.45
CLPTM1L-202ENST00000503042 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
CLPTM1L-202ENST00000503042 RUSC2Q8N2Y8 1516 aa17.83■□□□□ 0.44
CLPTM1L-202ENST00000503042 PRDM2Q13029 1718 aa17.82■□□□□ 0.44
CLPTM1L-202ENST00000503042 TOP2BQ02880 1626 aa17.82■□□□□ 0.44
CLPTM1L-202ENST00000503042 PCGF6Q9BYE7 350 aa17.82■□□□□ 0.44
CLPTM1L-202ENST00000503042 CADPSQ9ULU8 1353 aa17.81■□□□□ 0.44
CLPTM1L-202ENST00000503042 BIVM-ERCC5R4GMW8 1640 aa17.8■□□□□ 0.44
CLPTM1L-202ENST00000503042 EEA1Q15075 1411 aa17.78■□□□□ 0.44
CLPTM1L-202ENST00000503042 CUX1P39880 1505 aa17.75■□□□□ 0.43
CLPTM1L-202ENST00000503042 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
CLPTM1L-202ENST00000503042 PELP1Q8IZL8 1130 aaKnown RBP17.69■□□□□ 0.42
CLPTM1L-202ENST00000503042 DNAJC5BQ9UF47 199 aa17.68■□□□□ 0.42
CLPTM1L-202ENST00000503042 NESP48681 1621 aa17.66■□□□□ 0.42
CLPTM1L-202ENST00000503042 FANCD2Q9BXW9 1451 aa17.62■□□□□ 0.41
CLPTM1L-202ENST00000503042 HRCP23327 699 aa17.6■□□□□ 0.41
CLPTM1L-202ENST00000503042 LAMC3Q9Y6N6 1575 aa17.59■□□□□ 0.41
CLPTM1L-202ENST00000503042 GOLGA3Q08378 1498 aa17.59■□□□□ 0.41
CLPTM1L-202ENST00000503042 KIF21BO75037 1637 aa17.58■□□□□ 0.41
CLPTM1L-202ENST00000503042 TNIKQ9UKE5 1360 aa17.57■□□□□ 0.4
CLPTM1L-202ENST00000503042 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
CLPTM1L-202ENST00000503042 CEP162Q5TB80 1403 aa17.52■□□□□ 0.4
CLPTM1L-202ENST00000503042 UBTFP17480 764 aaKnown RBP17.52■□□□□ 0.39
CLPTM1L-202ENST00000503042 FGD5Q6ZNL6 1462 aa17.51■□□□□ 0.39
CLPTM1L-202ENST00000503042 RAPGEF2Q9Y4G8 1499 aa17.5■□□□□ 0.39
CLPTM1L-202ENST00000503042 KIF27Q86VH2 1401 aa17.49■□□□□ 0.39
CLPTM1L-202ENST00000503042 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
CLPTM1L-202ENST00000503042 TOPBP1Q92547 1522 aa17.46■□□□□ 0.39
CLPTM1L-202ENST00000503042 PRXQ9BXM0 1461 aa17.46■□□□□ 0.39
CLPTM1L-202ENST00000503042 PDS5BQ9NTI5 1447 aa17.44■□□□□ 0.38
CLPTM1L-202ENST00000503042 CUX2O14529 1486 aa17.43■□□□□ 0.38
CLPTM1L-202ENST00000503042 URB2Q14146 1524 aaKnown RBP17.42■□□□□ 0.38
CLPTM1L-202ENST00000503042 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
CLPTM1L-202ENST00000503042 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
CLPTM1L-202ENST00000503042 POLA1P09884 1462 aaPredicted RBP17.4■□□□□ 0.38
CLPTM1L-202ENST00000503042 TRIM26Q12899 539 aaPredicted RBP17.4■□□□□ 0.38
CLPTM1L-202ENST00000503042 RAD54L2Q9Y4B4 1467 aa17.38■□□□□ 0.37
CLPTM1L-202ENST00000503042 IGF1RP08069 1367 aa17.36■□□□□ 0.37
CLPTM1L-202ENST00000503042 ABCA10Q8WWZ4 1543 aa17.34■□□□□ 0.37
CLPTM1L-202ENST00000503042 CLIP1P30622 1438 aa17.33■□□□□ 0.36
CLPTM1L-202ENST00000503042 WDR97A6NE52 1622 aa17.29■□□□□ 0.36
CLPTM1L-202ENST00000503042 MYT1Q01538 1121 aa17.27■□□□□ 0.36
CLPTM1L-202ENST00000503042 CARMIL1Q5VZK9 1371 aa17.25■□□□□ 0.35
CLPTM1L-202ENST00000503042 RANGAP1P46060 587 aaPredicted RBP17.24■□□□□ 0.35
CLPTM1L-202ENST00000503042 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
CLPTM1L-202ENST00000503042 VPS8Q8N3P4 1428 aa17.2■□□□□ 0.34
CLPTM1L-202ENST00000503042 TARBP1Q13395 1621 aaKnown RBP17.2■□□□□ 0.34
CLPTM1L-202ENST00000503042 ABCA5Q8WWZ7 1642 aa17.2■□□□□ 0.34
CLPTM1L-202ENST00000503042 TDRD9Q8NDG6 1382 aaKnown RBP17.18■□□□□ 0.34
CLPTM1L-202ENST00000503042 ARAP1Q96P48 1450 aa17.16■□□□□ 0.34
CLPTM1L-202ENST00000503042 CUL7Q14999 1698 aa17.16■□□□□ 0.34
CLPTM1L-202ENST00000503042 GAPVD1Q14C86 1478 aa17.14■□□□□ 0.33
CLPTM1L-202ENST00000503042 WDR62O43379 1518 aa17.13■□□□□ 0.33
CLPTM1L-202ENST00000503042 ARHGAP35Q9NRY4 1499 aa17.12■□□□□ 0.33
CLPTM1L-202ENST00000503042 TTBK1Q5TCY1 1321 aaPredicted RBP17.11■□□□□ 0.33
CLPTM1L-202ENST00000503042 ERCC6Q03468 1493 aa17.08■□□□□ 0.33
CLPTM1L-202ENST00000503042 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
CLPTM1L-202ENST00000503042 PBRM1Q86U86 1689 aa17.05■□□□□ 0.32
CLPTM1L-202ENST00000503042 AQRO60306 1485 aaKnown RBP eCLIP17.04■□□□□ 0.327e-7■■■□□ 15.1
CLPTM1L-202ENST00000503042 IFT140Q96RY7 1462 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms