RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 GRIN2BQ13224 1484 aa28.32■■■□□ 2.12
LINC00535-201ENST00000501400 EIF4G3O43432 1585 aaKnown RBP28.32■■■□□ 2.12
LINC00535-201ENST00000501400 HRCP23327 699 aa28.3■■■□□ 2.12
LINC00535-201ENST00000501400 FHAD1B1AJZ9 1412 aa28.28■■■□□ 2.12
LINC00535-201ENST00000501400 EFCAB5A4FU69 1503 aa28.26■■■□□ 2.11
LINC00535-201ENST00000501400 SAMD9Q5K651 1589 aa28.17■■■□□ 2.1
LINC00535-201ENST00000501400 APLP2Q06481 763 aa28.17■■■□□ 2.1
LINC00535-201ENST00000501400 SNAPC4Q5SXM2 1469 aa28.16■■■□□ 2.1
LINC00535-201ENST00000501400 FHOD3Q2V2M9 1422 aa28.14■■■□□ 2.09
LINC00535-201ENST00000501400 PCF11O94913 1555 aaKnown RBP28.13■■■□□ 2.09
LINC00535-201ENST00000501400 IQGAP2Q13576 1575 aa28.06■■■□□ 2.08
LINC00535-201ENST00000501400 P3H3Q8IVL6 736 aa28.06■■■□□ 2.08
LINC00535-201ENST00000501400 MAGI1Q96QZ7 1491 aaPredicted RBP28.06■■■□□ 2.08
LINC00535-201ENST00000501400 TIAM1Q13009 1591 aa28.06■■■□□ 2.08
LINC00535-201ENST00000501400 MAP3K1Q13233 1512 aa28.05■■■□□ 2.08
LINC00535-201ENST00000501400 KANK4Q5T7N3 995 aaPredicted RBP28.04■■■□□ 2.08
LINC00535-201ENST00000501400 CFAP43Q8NDM7 1665 aa28.03■■■□□ 2.08
LINC00535-201ENST00000501400 GRIN2AQ12879 1464 aa28.03■■■□□ 2.08
LINC00535-201ENST00000501400 FYCO1Q9BQS8 1478 aa28■■■□□ 2.07
LINC00535-201ENST00000501400 CASKIN1Q8WXD9 1431 aa27.97■■■□□ 2.07
LINC00535-201ENST00000501400 SYNJ2O15056 1496 aa27.96■■■□□ 2.07
LINC00535-201ENST00000501400 FMN1Q68DA7 1419 aa27.95■■■□□ 2.07
LINC00535-201ENST00000501400 UGGT2Q9NYU1 1516 aa27.93■■■□□ 2.06
LINC00535-201ENST00000501400 KIAA0586Q9BVV6 1533 aa27.91■■■□□ 2.06
LINC00535-201ENST00000501400 LRRC9Q6ZRR7 1453 aa27.89■■■□□ 2.06
LINC00535-201ENST00000501400 CEP170Q5SW79 1584 aa27.89■■■□□ 2.06
LINC00535-201ENST00000501400 LRRIQ1Q96JM4 1722 aa27.88■■■□□ 2.05
LINC00535-201ENST00000501400 RRBP1Q9P2E9 1410 aaKnown RBP27.83■■■□□ 2.05
LINC00535-201ENST00000501400 NUP160Q12769 1436 aa27.81■■■□□ 2.04
LINC00535-201ENST00000501400 KIAA0556O60303 1618 aa27.8■■■□□ 2.04
LINC00535-201ENST00000501400 DISP1Q96F81 1524 aa27.79■■■□□ 2.04
LINC00535-201ENST00000501400 CHMP7Q8WUX9 453 aaPredicted RBP27.79■■■□□ 2.04
LINC00535-201ENST00000501400 ATP1B4Q9UN42 357 aaPredicted RBP27.74■■■□□ 2.03
LINC00535-201ENST00000501400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.73■■■□□ 2.03
LINC00535-201ENST00000501400 HNRNPUL2Q1KMD3 747 aaKnown RBP27.7■■■□□ 2.02
LINC00535-201ENST00000501400 HECW1Q76N89 1606 aa27.7■■■□□ 2.02
LINC00535-201ENST00000501400 ZEB1P37275 1124 aaPredicted RBP27.69■■■□□ 2.02
LINC00535-201ENST00000501400 FBLN2P98095 1184 aa27.69■■■□□ 2.02
LINC00535-201ENST00000501400 PHLDB1Q86UU1 1377 aa27.68■■■□□ 2.02
LINC00535-201ENST00000501400 CCNB3Q8WWL7 1395 aa27.68■■■□□ 2.02
LINC00535-201ENST00000501400 CHD1O14646 1710 aa27.66■■■□□ 2.02
LINC00535-201ENST00000501400 CCDC18Q5T9S5 1454 aa27.63■■■□□ 2.01
LINC00535-201ENST00000501400 MAGI3Q5TCQ9 1506 aa27.59■■■□□ 2.01
LINC00535-201ENST00000501400 CCER1Q8TC90 406 aaPredicted RBP27.59■■■□□ 2.01
LINC00535-201ENST00000501400 EHBP1L1Q8N3D4 1523 aa27.59■■■□□ 2.01
LINC00535-201ENST00000501400 EPRSP07814 1512 aaKnown RBP27.58■■■□□ 2.01
LINC00535-201ENST00000501400 MTUS2Q5JR59 1369 aa27.56■■■□□ 2
LINC00535-201ENST00000501400 CDK13Q14004 1512 aaKnown RBP27.55■■■□□ 2
LINC00535-201ENST00000501400 RAPGEF6Q8TEU7 1601 aa27.55■■■□□ 2
LINC00535-201ENST00000501400 SUPT6HQ7KZ85 1726 aaKnown RBP27.52■■■□□ 2
LINC00535-201ENST00000501400 JPH4Q96JJ6 628 aa27.51■■■□□ 2
LINC00535-201ENST00000501400 NUP153P49790 1475 aaKnown RBP27.5■■□□□ 1.99
LINC00535-201ENST00000501400 ARHGEF11O15085 1522 aa27.49■■□□□ 1.99
LINC00535-201ENST00000501400 NCOA2Q15596 1464 aa27.49■■□□□ 1.99
LINC00535-201ENST00000501400 CARMIL2Q6F5E8 1435 aa27.49■■□□□ 1.99
LINC00535-201ENST00000501400 FGD6Q6ZV73 1430 aa27.44■■□□□ 1.98
LINC00535-201ENST00000501400 SHROOM2Q13796 1616 aa27.43■■□□□ 1.98
LINC00535-201ENST00000501400 PLB1Q6P1J6 1458 aa27.42■■□□□ 1.98
LINC00535-201ENST00000501400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.4■■□□□ 1.98
LINC00535-201ENST00000501400 MYOM3Q5VTT5 1437 aa27.39■■□□□ 1.98
LINC00535-201ENST00000501400 ABCA8O94911 1581 aa27.37■■□□□ 1.97
LINC00535-201ENST00000501400 PRG4Q92954 1404 aaPredicted RBP27.36■■□□□ 1.97
LINC00535-201ENST00000501400 ARID3CA6NKF2 412 aa27.35■■□□□ 1.97
LINC00535-201ENST00000501400 ITGAEP38570 1179 aa27.34■■□□□ 1.97
LINC00535-201ENST00000501400 FAM50AQ14320 339 aaKnown RBP27.34■■□□□ 1.97
LINC00535-201ENST00000501400 CLASP1Q7Z460 1538 aa27.31■■□□□ 1.96
LINC00535-201ENST00000501400 PTPN23Q9H3S7 1636 aa27.29■■□□□ 1.96
LINC00535-201ENST00000501400 DHX57Q6P158 1386 aaKnown RBP27.26■■□□□ 1.95
LINC00535-201ENST00000501400 ERCC6L2Q5T890 1561 aa27.25■■□□□ 1.95
LINC00535-201ENST00000501400 TCOF1Q13428 1488 aaKnown RBP27.24■■□□□ 1.95
LINC00535-201ENST00000501400 RAB3GAP2Q9H2M9 1393 aa27.22■■□□□ 1.95
LINC00535-201ENST00000501400 ADCY10Q96PN6 1610 aa27.22■■□□□ 1.95
LINC00535-201ENST00000501400 TROQ12816 1431 aaPredicted RBP27.21■■□□□ 1.95
LINC00535-201ENST00000501400 PTPRGP23470 1445 aa27.2■■□□□ 1.94
LINC00535-201ENST00000501400 SETD5Q9C0A6 1442 aa27.2■■□□□ 1.94
LINC00535-201ENST00000501400 PTPRKQ15262 1439 aa27.19■■□□□ 1.94
LINC00535-201ENST00000501400 MIA2Q96PC5 1412 aa27.18■■□□□ 1.94
LINC00535-201ENST00000501400 KIF14Q15058 1648 aa27.16■■□□□ 1.94
LINC00535-201ENST00000501400 ATP10BO94823 1461 aa27.16■■□□□ 1.94
LINC00535-201ENST00000501400 CDK11AQ9UQ88 783 aaPredicted RBP27.14■■□□□ 1.94
LINC00535-201ENST00000501400 CLSPNQ9HAW4 1339 aa27.11■■□□□ 1.93
LINC00535-201ENST00000501400 ITSN2Q9NZM3 1697 aa27.08■■□□□ 1.93
LINC00535-201ENST00000501400 UACAQ9BZF9 1416 aa27.08■■□□□ 1.93
LINC00535-201ENST00000501400 HFM1A2PYH4 1435 aa27.06■■□□□ 1.92
LINC00535-201ENST00000501400 MAPKBP1O60336 1514 aa27.03■■□□□ 1.92
LINC00535-201ENST00000501400 ABCC2Q92887 1545 aa27.03■■□□□ 1.92
LINC00535-201ENST00000501400 GPATCH8Q9UKJ3 1502 aaKnown RBP27.02■■□□□ 1.92
LINC00535-201ENST00000501400 ABCC10Q5T3U5 1492 aa27.01■■□□□ 1.91
LINC00535-201ENST00000501400 NAIPQ13075 1403 aa27■■□□□ 1.91
LINC00535-201ENST00000501400 GCC2Q8IWJ2 1684 aa27■■□□□ 1.91
LINC00535-201ENST00000501400 DNMT1P26358 1616 aaKnown RBP27■■□□□ 1.91
LINC00535-201ENST00000501400 CDC42BPAQ5VT25 1732 aa26.99■■□□□ 1.91
LINC00535-201ENST00000501400 AKNAQ7Z591 1439 aa26.96■■□□□ 1.91
LINC00535-201ENST00000501400 PLEKHD1A6NEE1 506 aa26.95■■□□□ 1.9
LINC00535-201ENST00000501400 CAMSAP2Q08AD1 1489 aa26.95■■□□□ 1.9
LINC00535-201ENST00000501400 DAPK1P53355 1430 aa26.93■■□□□ 1.9
LINC00535-201ENST00000501400 ZNF644Q9H582 1327 aaPredicted RBP26.93■■□□□ 1.9
LINC00535-201ENST00000501400 UHRF1BP1LA0JNW5 1464 aa26.91■■□□□ 1.9
LINC00535-201ENST00000501400 ABCC5O15440 1437 aa26.9■■□□□ 1.9
LINC00535-201ENST00000501400 ZCCHC11Q5TAX3 1644 aaKnown RBP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms