RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 KCNA4P22459 653 aa12.82□□□□□ -0.36
PDZRN3-212ENST00000498048 ARAP1Q96P48 1450 aa12.8□□□□□ -0.36
PDZRN3-212ENST00000498048 EFCAB5A4FU69 1503 aa12.8□□□□□ -0.36
PDZRN3-212ENST00000498048 GRIN2BQ13224 1484 aa12.79□□□□□ -0.36
PDZRN3-212ENST00000498048 ZNF608Q9ULD9 1512 aaPredicted RBP12.79□□□□□ -0.36
PDZRN3-212ENST00000498048 TDRD9Q8NDG6 1382 aaKnown RBP12.79□□□□□ -0.36
PDZRN3-212ENST00000498048 VPS8Q8N3P4 1428 aa12.79□□□□□ -0.36
PDZRN3-212ENST00000498048 CFAP43Q8NDM7 1665 aa12.78□□□□□ -0.36
PDZRN3-212ENST00000498048 SAMD9Q5K651 1589 aa12.77□□□□□ -0.37
PDZRN3-212ENST00000498048 CHD1O14646 1710 aa12.75□□□□□ -0.37
PDZRN3-212ENST00000498048 IQGAP2Q13576 1575 aa12.75□□□□□ -0.37
PDZRN3-212ENST00000498048 SNAPC4Q5SXM2 1469 aa12.75□□□□□ -0.37
PDZRN3-212ENST00000498048 SCAF1Q9H7N4 1312 aaKnown RBP12.75□□□□□ -0.37
PDZRN3-212ENST00000498048 ARHGAP35Q9NRY4 1499 aa12.75□□□□□ -0.37
PDZRN3-212ENST00000498048 PCF11O94913 1555 aaKnown RBP12.74□□□□□ -0.37
PDZRN3-212ENST00000498048 AQRO60306 1485 aaKnown RBP eCLIP12.74□□□□□ -0.37
PDZRN3-212ENST00000498048 FHAD1B1AJZ9 1412 aa12.73□□□□□ -0.37
PDZRN3-212ENST00000498048 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
PDZRN3-212ENST00000498048 LRRIQ1Q96JM4 1722 aa12.7□□□□□ -0.38
PDZRN3-212ENST00000498048 GRIN2AQ12879 1464 aa12.67□□□□□ -0.38
PDZRN3-212ENST00000498048 RANGAP1P46060 587 aaPredicted RBP12.67□□□□□ -0.38
PDZRN3-212ENST00000498048 NCBP3Q53F19 620 aaKnown RBP12.66□□□□□ -0.38
PDZRN3-212ENST00000498048 CEP170Q5SW79 1584 aa12.65□□□□□ -0.38
PDZRN3-212ENST00000498048 SYNJ2O15056 1496 aa12.65□□□□□ -0.38
PDZRN3-212ENST00000498048 TIAM1Q13009 1591 aa12.64□□□□□ -0.39
PDZRN3-212ENST00000498048 KIAA0556O60303 1618 aa12.63□□□□□ -0.39
PDZRN3-212ENST00000498048 FYCO1Q9BQS8 1478 aa12.62□□□□□ -0.39
PDZRN3-212ENST00000498048 TRIM26Q12899 539 aaPredicted RBP12.62□□□□□ -0.39
PDZRN3-212ENST00000498048 MAPK8IP2Q13387 824 aaPredicted RBP12.62□□□□□ -0.39
PDZRN3-212ENST00000498048 FHOD3Q2V2M9 1422 aa12.62□□□□□ -0.39
PDZRN3-212ENST00000498048 PCGF6Q9BYE7 350 aa12.61□□□□□ -0.39
PDZRN3-212ENST00000498048 UGGT2Q9NYU1 1516 aa12.61□□□□□ -0.39
PDZRN3-212ENST00000498048 HECW1Q76N89 1606 aa12.6□□□□□ -0.39
PDZRN3-212ENST00000498048 MAP3K1Q13233 1512 aa12.57□□□□□ -0.4
PDZRN3-212ENST00000498048 KIAA0586Q9BVV6 1533 aa12.56□□□□□ -0.4
PDZRN3-212ENST00000498048 FMN1Q68DA7 1419 aa12.55□□□□□ -0.4
PDZRN3-212ENST00000498048 PPARGC1BQ86YN6 1023 aaKnown RBP12.55□□□□□ -0.4
PDZRN3-212ENST00000498048 CNKSR2Q8WXI2 1034 aa12.54□□□□□ -0.4
PDZRN3-212ENST00000498048 NUP160Q12769 1436 aa12.54□□□□□ -0.4
PDZRN3-212ENST00000498048 APLP2Q06481 763 aa12.53□□□□□ -0.4
PDZRN3-212ENST00000498048 TTBK1Q5TCY1 1321 aaPredicted RBP12.53□□□□□ -0.4
PDZRN3-212ENST00000498048 CASKIN1Q8WXD9 1431 aa12.53□□□□□ -0.4
PDZRN3-212ENST00000498048 RAPGEF6Q8TEU7 1601 aa12.52□□□□□ -0.4
PDZRN3-212ENST00000498048 SHROOM2Q13796 1616 aa12.51□□□□□ -0.41
PDZRN3-212ENST00000498048 SUPT6HQ7KZ85 1726 aaKnown RBP12.51□□□□□ -0.41
PDZRN3-212ENST00000498048 EHBP1L1Q8N3D4 1523 aa12.49□□□□□ -0.41
PDZRN3-212ENST00000498048 DISP1Q96F81 1524 aa12.49□□□□□ -0.41
PDZRN3-212ENST00000498048 CCDC18Q5T9S5 1454 aa12.48□□□□□ -0.41
PDZRN3-212ENST00000498048 LRRC9Q6ZRR7 1453 aa12.46□□□□□ -0.41
PDZRN3-212ENST00000498048 NPM3O75607 178 aaKnown RBP12.46□□□□□ -0.41
PDZRN3-212ENST00000498048 P3H3Q8IVL6 736 aa12.45□□□□□ -0.42
PDZRN3-212ENST00000498048 CLASP1Q7Z460 1538 aa12.44□□□□□ -0.42
PDZRN3-212ENST00000498048 CHMP7Q8WUX9 453 aaPredicted RBP12.44□□□□□ -0.42
PDZRN3-212ENST00000498048 ITSN2Q9NZM3 1697 aa12.41□□□□□ -0.42
PDZRN3-212ENST00000498048 CDK13Q14004 1512 aaKnown RBP12.41□□□□□ -0.42
PDZRN3-212ENST00000498048 ADCY10Q96PN6 1610 aa12.4□□□□□ -0.42
PDZRN3-212ENST00000498048 FBLN2P98095 1184 aa12.4□□□□□ -0.42
PDZRN3-212ENST00000498048 CARMIL2Q6F5E8 1435 aa12.39□□□□□ -0.43
PDZRN3-212ENST00000498048 EPRSP07814 1512 aaKnown RBP12.39□□□□□ -0.43
PDZRN3-212ENST00000498048 MAGI3Q5TCQ9 1506 aa12.39□□□□□ -0.43
PDZRN3-212ENST00000498048 RRBP1Q9P2E9 1410 aaKnown RBP12.38□□□□□ -0.43
PDZRN3-212ENST00000498048 ABCA8O94911 1581 aa12.38□□□□□ -0.43
PDZRN3-212ENST00000498048 DMRT2Q9Y5R5 561 aa12.37□□□□□ -0.43
PDZRN3-212ENST00000498048 KANK4Q5T7N3 995 aaPredicted RBP12.36□□□□□ -0.43
PDZRN3-212ENST00000498048 NUP153P49790 1475 aaKnown RBP12.35□□□□□ -0.43
PDZRN3-212ENST00000498048 ATP1B4Q9UN42 357 aaPredicted RBP12.34□□□□□ -0.43
PDZRN3-212ENST00000498048 PTPN23Q9H3S7 1636 aa12.33□□□□□ -0.43
PDZRN3-212ENST00000498048 MTUS2Q5JR59 1369 aa12.33□□□□□ -0.44
PDZRN3-212ENST00000498048 ARHGEF11O15085 1522 aa12.33□□□□□ -0.44
PDZRN3-212ENST00000498048 ERCC6L2Q5T890 1561 aa12.33□□□□□ -0.44
PDZRN3-212ENST00000498048 KIF14Q15058 1648 aa12.33□□□□□ -0.44
PDZRN3-212ENST00000498048 NCOA2Q15596 1464 aa12.32□□□□□ -0.44
PDZRN3-212ENST00000498048 PLB1Q6P1J6 1458 aa12.32□□□□□ -0.44
PDZRN3-212ENST00000498048 CDC42BPAQ5VT25 1732 aa12.31□□□□□ -0.44
PDZRN3-212ENST00000498048 PRG4Q92954 1404 aaPredicted RBP12.31□□□□□ -0.44
PDZRN3-212ENST00000498048 HRCP23327 699 aa12.31□□□□□ -0.44
PDZRN3-212ENST00000498048 PHLDB1Q86UU1 1377 aa12.3□□□□□ -0.44
PDZRN3-212ENST00000498048 CCNB3Q8WWL7 1395 aa12.3□□□□□ -0.44
PDZRN3-212ENST00000498048 CROCC2H7BZ55 1655 aa12.3□□□□□ -0.44
PDZRN3-212ENST00000498048 GCC2Q8IWJ2 1684 aa12.29□□□□□ -0.44
PDZRN3-212ENST00000498048 ADGBQ8N7X0 1667 aa12.28□□□□□ -0.44
PDZRN3-212ENST00000498048 ZCCHC11Q5TAX3 1644 aaKnown RBP12.27□□□□□ -0.44
PDZRN3-212ENST00000498048 MYOM3Q5VTT5 1437 aa12.27□□□□□ -0.45
PDZRN3-212ENST00000498048 FGD6Q6ZV73 1430 aa12.27□□□□□ -0.45
PDZRN3-212ENST00000498048 ABCC2Q92887 1545 aa12.27□□□□□ -0.45
PDZRN3-212ENST00000498048 JPH4Q96JJ6 628 aa12.26□□□□□ -0.45
PDZRN3-212ENST00000498048 MYO5CQ9NQX4 1742 aa12.25□□□□□ -0.45
PDZRN3-212ENST00000498048 SLC4A1APQ9BWU0 796 aaKnown RBP12.25□□□□□ -0.45
PDZRN3-212ENST00000498048 RNF216Q9NWF9 866 aaPredicted RBP12.25□□□□□ -0.45
PDZRN3-212ENST00000498048 PREX2Q70Z35 1606 aa12.24□□□□□ -0.45
PDZRN3-212ENST00000498048 DNMT1P26358 1616 aaKnown RBP12.22□□□□□ -0.45
PDZRN3-212ENST00000498048 TROQ12816 1431 aaPredicted RBP12.22□□□□□ -0.45
PDZRN3-212ENST00000498048 TCOF1Q13428 1488 aaKnown RBP12.21□□□□□ -0.45
PDZRN3-212ENST00000498048 HNRNPUL2Q1KMD3 747 aaKnown RBP12.21□□□□□ -0.45
PDZRN3-212ENST00000498048 CDC42BPBQ9Y5S2 1711 aa12.2□□□□□ -0.46
PDZRN3-212ENST00000498048 PTPRGP23470 1445 aa12.2□□□□□ -0.46
PDZRN3-212ENST00000498048 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.19□□□□□ -0.46
PDZRN3-212ENST00000498048 TTC37Q6PGP7 1564 aa12.18□□□□□ -0.46
PDZRN3-212ENST00000498048 ARID3CA6NKF2 412 aa12.18□□□□□ -0.46
PDZRN3-212ENST00000498048 UACAQ9BZF9 1416 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms