RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 GRIN2BQ13224 1484 aa13.95□□□□□ -0.18
GAPVD1-219ENST00000495955 IGF1RP08069 1367 aa13.94□□□□□ -0.18
GAPVD1-219ENST00000495955 TOP2BQ02880 1626 aa13.92□□□□□ -0.18
GAPVD1-219ENST00000495955 URB2Q14146 1524 aaKnown RBP13.91□□□□□ -0.18
GAPVD1-219ENST00000495955 CYB5RLQ6IPT4 315 aa13.88□□□□□ -0.19
GAPVD1-219ENST00000495955 FHAD1B1AJZ9 1412 aa13.88□□□□□ -0.19
GAPVD1-219ENST00000495955 SNAPC4Q5SXM2 1469 aa13.86□□□□□ -0.19
GAPVD1-219ENST00000495955 ESF1Q9H501 851 aaKnown RBP13.85□□□□□ -0.19
GAPVD1-219ENST00000495955 PLPPR3Q6T4P5 718 aa13.83□□□□□ -0.2
GAPVD1-219ENST00000495955 CHIC2Q9UKJ5 165 aa13.83□□□□□ -0.2
GAPVD1-219ENST00000495955 ZEB1P37275 1124 aaPredicted RBP13.82□□□□□ -0.2
GAPVD1-219ENST00000495955 TSPY4P0CV99 314 aa13.82□□□□□ -0.2
GAPVD1-219ENST00000495955 TSPY10P0CW01 314 aa13.82□□□□□ -0.2
GAPVD1-219ENST00000495955 FHOD3Q2V2M9 1422 aa13.81□□□□□ -0.2
GAPVD1-219ENST00000495955 KIF21AQ7Z4S6 1674 aa13.8□□□□□ -0.2
GAPVD1-219ENST00000495955 CFDP1Q9UEE9 299 aaPredicted RBP13.8□□□□□ -0.2
GAPVD1-219ENST00000495955 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
GAPVD1-219ENST00000495955 PTPRGP23470 1445 aa13.79□□□□□ -0.2
GAPVD1-219ENST00000495955 FMN1Q68DA7 1419 aa13.78□□□□□ -0.2
GAPVD1-219ENST00000495955 ZNF608Q9ULD9 1512 aaPredicted RBP13.78□□□□□ -0.2
GAPVD1-219ENST00000495955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.74□□□□□ -0.214e-9■□□□□ 10.4
GAPVD1-219ENST00000495955 NEUROD1Q13562 356 aa13.73□□□□□ -0.21
GAPVD1-219ENST00000495955 CCNB3Q8WWL7 1395 aa13.73□□□□□ -0.21
GAPVD1-219ENST00000495955 PRG4Q92954 1404 aaPredicted RBP13.71□□□□□ -0.21
GAPVD1-219ENST00000495955 VPS8Q8N3P4 1428 aa13.71□□□□□ -0.22
GAPVD1-219ENST00000495955 ARID4BQ4LE39 1312 aaPredicted RBP13.71□□□□□ -0.22
GAPVD1-219ENST00000495955 SYNJ2O15056 1496 aa13.7□□□□□ -0.22
GAPVD1-219ENST00000495955 BIVM-ERCC5R4GMW8 1640 aa13.69□□□□□ -0.22
GAPVD1-219ENST00000495955 MAGI1Q96QZ7 1491 aaPredicted RBP13.68□□□□□ -0.22
GAPVD1-219ENST00000495955 BCANQ96GW7 911 aa13.68□□□□□ -0.22
GAPVD1-219ENST00000495955 RRP7BPQ9NSQ0 103 aa13.67□□□□□ -0.22
GAPVD1-219ENST00000495955 WDR62O43379 1518 aa13.67□□□□□ -0.22
GAPVD1-219ENST00000495955 POLR3GLQ9BT43 218 aa13.66□□□□□ -0.22
GAPVD1-219ENST00000495955 ZNF326Q5BKZ1 582 aaKnown RBP13.65□□□□□ -0.22
GAPVD1-219ENST00000495955 ERICH3Q5RHP9 1530 aa13.65□□□□□ -0.22
GAPVD1-219ENST00000495955 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
GAPVD1-219ENST00000495955 CHGAP10645 457 aaKnown RBP13.64□□□□□ -0.23
GAPVD1-219ENST00000495955 KANK4Q5T7N3 995 aaPredicted RBP13.63□□□□□ -0.23
GAPVD1-219ENST00000495955 PRXQ9BXM0 1461 aa13.63□□□□□ -0.23
GAPVD1-219ENST00000495955 GRIN2AQ12879 1464 aa13.63□□□□□ -0.23
GAPVD1-219ENST00000495955 KIF21BO75037 1637 aa13.62□□□□□ -0.23
GAPVD1-219ENST00000495955 PRDM2Q13029 1718 aa13.61□□□□□ -0.23
GAPVD1-219ENST00000495955 CUL7Q14999 1698 aa13.6□□□□□ -0.23
GAPVD1-219ENST00000495955 EFCAB2Q5VUJ9 269 aa13.6□□□□□ -0.23
GAPVD1-219ENST00000495955 KIAA0586Q9BVV6 1533 aa13.59□□□□□ -0.23
GAPVD1-219ENST00000495955 ARHGAP35Q9NRY4 1499 aa13.58□□□□□ -0.24
GAPVD1-219ENST00000495955 FAM69CQ0P6D2 419 aa13.58□□□□□ -0.24
GAPVD1-219ENST00000495955 CCDC18Q5T9S5 1454 aa13.56□□□□□ -0.24
GAPVD1-219ENST00000495955 MLECQ14165 292 aa13.54□□□□□ -0.24
GAPVD1-219ENST00000495955 EIF4G3O43432 1585 aaKnown RBP13.54□□□□□ -0.24
GAPVD1-219ENST00000495955 SLC4A1APQ9BWU0 796 aaKnown RBP13.54□□□□□ -0.24
GAPVD1-219ENST00000495955 IQGAP2Q13576 1575 aa13.53□□□□□ -0.24
GAPVD1-219ENST00000495955 HNRNPMP52272 730 aaKnown RBP eCLIP13.51□□□□□ -0.256e-13■■■■■ 43.1
GAPVD1-219ENST00000495955 EFCAB5A4FU69 1503 aa13.48□□□□□ -0.25
GAPVD1-219ENST00000495955 CNGB1Q14028 1251 aaPredicted RBP13.47□□□□□ -0.25
GAPVD1-219ENST00000495955 GGT6Q6P531 493 aa13.45□□□□□ -0.26
GAPVD1-219ENST00000495955 THOC2Q8NI27 1593 aaKnown RBP13.45□□□□□ -0.26
GAPVD1-219ENST00000495955 ARAP1Q96P48 1450 aa13.45□□□□□ -0.26
GAPVD1-219ENST00000495955 CASKIN1Q8WXD9 1431 aa13.45□□□□□ -0.26
GAPVD1-219ENST00000495955 ADAMTS12P58397 1594 aa13.44□□□□□ -0.26
GAPVD1-219ENST00000495955 UACAQ9BZF9 1416 aa13.44□□□□□ -0.26
GAPVD1-219ENST00000495955 SENP3Q9H4L4 574 aaPredicted RBP13.44□□□□□ -0.26
GAPVD1-219ENST00000495955 SPAG9O60271 1321 aaKnown RBP13.43□□□□□ -0.26
GAPVD1-219ENST00000495955 TONSLQ96HA7 1378 aa13.41□□□□□ -0.26
GAPVD1-219ENST00000495955 PBRM1Q86U86 1689 aa13.41□□□□□ -0.26
GAPVD1-219ENST00000495955 HRCP23327 699 aa13.41□□□□□ -0.26
GAPVD1-219ENST00000495955 KANK1Q14678 1352 aa13.4□□□□□ -0.26
GAPVD1-219ENST00000495955 PPP1R15AO75807 674 aaPredicted RBP13.4□□□□□ -0.26
GAPVD1-219ENST00000495955 KDM2AQ9Y2K7 1162 aa13.4□□□□□ -0.26
GAPVD1-219ENST00000495955 TARBP1Q13395 1621 aaKnown RBP13.39□□□□□ -0.27
GAPVD1-219ENST00000495955 RSPH4AQ5TD94 716 aa13.39□□□□□ -0.27
GAPVD1-219ENST00000495955 FYCO1Q9BQS8 1478 aa13.39□□□□□ -0.27
GAPVD1-219ENST00000495955 PLB1Q6P1J6 1458 aa13.38□□□□□ -0.27
GAPVD1-219ENST00000495955 ACIN1Q9UKV3 1341 aaKnown RBP13.38□□□□□ -0.27
GAPVD1-219ENST00000495955 ANKRD30AQ9BXX3 1397 aa13.37□□□□□ -0.27
GAPVD1-219ENST00000495955 ABCA5Q8WWZ7 1642 aa13.37□□□□□ -0.27
GAPVD1-219ENST00000495955 KIF3BO15066 747 aa13.37□□□□□ -0.27
GAPVD1-219ENST00000495955 HECW1Q76N89 1606 aa13.36□□□□□ -0.27
GAPVD1-219ENST00000495955 RGL3Q3MIN7 710 aa13.36□□□□□ -0.27
GAPVD1-219ENST00000495955 WDR97A6NE52 1622 aa13.35□□□□□ -0.27
GAPVD1-219ENST00000495955 ARHGAP5Q13017 1502 aa13.33□□□□□ -0.28
GAPVD1-219ENST00000495955 ZNF644Q9H582 1327 aaPredicted RBP13.32□□□□□ -0.28
GAPVD1-219ENST00000495955 LRRC9Q6ZRR7 1453 aa13.32□□□□□ -0.28
GAPVD1-219ENST00000495955 CDK13Q14004 1512 aaKnown RBP13.32□□□□□ -0.28
GAPVD1-219ENST00000495955 NUP160Q12769 1436 aa13.3□□□□□ -0.28
GAPVD1-219ENST00000495955 NCOA2Q15596 1464 aa13.3□□□□□ -0.28
GAPVD1-219ENST00000495955 EPRSP07814 1512 aaKnown RBP13.3□□□□□ -0.28
GAPVD1-219ENST00000495955 TROQ12816 1431 aaPredicted RBP13.29□□□□□ -0.28
GAPVD1-219ENST00000495955 WASHC2CQ9Y4E1 1318 aa13.28□□□□□ -0.28
GAPVD1-219ENST00000495955 SETD5Q9C0A6 1442 aa13.28□□□□□ -0.28
GAPVD1-219ENST00000495955 MYOM3Q5VTT5 1437 aa13.28□□□□□ -0.28
GAPVD1-219ENST00000495955 NUP155O75694 1391 aa13.27□□□□□ -0.28
GAPVD1-219ENST00000495955 CTTNBP2Q8WZ74 1663 aa13.27□□□□□ -0.29
GAPVD1-219ENST00000495955 AFAP1Q8N556 730 aa13.26□□□□□ -0.29
GAPVD1-219ENST00000495955 PCF11O94913 1555 aaKnown RBP13.26□□□□□ -0.29
GAPVD1-219ENST00000495955 PHLDB1Q86UU1 1377 aa13.26□□□□□ -0.29
GAPVD1-219ENST00000495955 PKD2Q13563 968 aa13.25□□□□□ -0.29
GAPVD1-219ENST00000495955 EHBP1L1Q8N3D4 1523 aa13.25□□□□□ -0.29
GAPVD1-219ENST00000495955 CEP170Q5SW79 1584 aa13.25□□□□□ -0.29
GAPVD1-219ENST00000495955 FGD6Q6ZV73 1430 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms