RNA–Protein interactions for RNA: ENST00000494939.1

MKRN1-213, Transcript of makorin ring finger protein 1, humanhuman

TSL 3

Gene MKRN1, Length 784 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-213ENST00000494939 SHROOM2Q13796 1616 aa14.35□□□□□ -0.11
MKRN1-213ENST00000494939 IGF1RP08069 1367 aa14.34□□□□□ -0.11
MKRN1-213ENST00000494939 RUSC2Q8N2Y8 1516 aa14.33□□□□□ -0.12
MKRN1-213ENST00000494939 ERCC6L2Q5T890 1561 aa14.33□□□□□ -0.12
MKRN1-213ENST00000494939 CARMIL1Q5VZK9 1371 aa14.25□□□□□ -0.13
MKRN1-213ENST00000494939 KIAA0586Q9BVV6 1533 aa14.24□□□□□ -0.13
MKRN1-213ENST00000494939 PRG4Q92954 1404 aaPredicted RBP14.24□□□□□ -0.13
MKRN1-213ENST00000494939 JPH4Q96JJ6 628 aa14.22□□□□□ -0.13
MKRN1-213ENST00000494939 RAPGEF2Q9Y4G8 1499 aa14.18□□□□□ -0.14
MKRN1-213ENST00000494939 PLPPR3Q6T4P5 718 aa14.16□□□□□ -0.14
MKRN1-213ENST00000494939 IQGAP2Q13576 1575 aa14.15□□□□□ -0.14
MKRN1-213ENST00000494939 MSH5O43196 834 aa14.13□□□□□ -0.15
MKRN1-213ENST00000494939 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
MKRN1-213ENST00000494939 PRXQ9BXM0 1461 aa14.11□□□□□ -0.15
MKRN1-213ENST00000494939 ADCY10Q96PN6 1610 aa14.08□□□□□ -0.15
MKRN1-213ENST00000494939 CTTNBP2Q8WZ74 1663 aa14.07□□□□□ -0.16
MKRN1-213ENST00000494939 DISP1Q96F81 1524 aa14.07□□□□□ -0.16
MKRN1-213ENST00000494939 UGGT2Q9NYU1 1516 aa14.07□□□□□ -0.16
MKRN1-213ENST00000494939 CARMIL2Q6F5E8 1435 aa14.07□□□□□ -0.16
MKRN1-213ENST00000494939 TNIKQ9UKE5 1360 aa14.05□□□□□ -0.16
MKRN1-213ENST00000494939 KIAA0556O60303 1618 aa14.04□□□□□ -0.16
MKRN1-213ENST00000494939 PTPRGP23470 1445 aa14.03□□□□□ -0.16
MKRN1-213ENST00000494939 MAPKBP1O60336 1514 aa14.02□□□□□ -0.16
MKRN1-213ENST00000494939 EEA1Q15075 1411 aa14.02□□□□□ -0.16
MKRN1-213ENST00000494939 KIF13AQ9H1H9 1805 aa13.99□□□□□ -0.17
MKRN1-213ENST00000494939 PIAS4Q8N2W9 510 aaPredicted RBP13.99□□□□□ -0.17
MKRN1-213ENST00000494939 CSRNP3Q8WYN3 585 aa13.99□□□□□ -0.17
MKRN1-213ENST00000494939 UHRF1BP1LA0JNW5 1464 aa13.97□□□□□ -0.17
MKRN1-213ENST00000494939 TTBK1Q5TCY1 1321 aaPredicted RBP13.96□□□□□ -0.17
MKRN1-213ENST00000494939 ABCC2Q92887 1545 aa13.96□□□□□ -0.17
MKRN1-213ENST00000494939 GOLGA3Q08378 1498 aa13.96□□□□□ -0.17
MKRN1-213ENST00000494939 ABCC10Q5T3U5 1492 aa13.96□□□□□ -0.17
MKRN1-213ENST00000494939 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
MKRN1-213ENST00000494939 UACAQ9BZF9 1416 aa13.96□□□□□ -0.18
MKRN1-213ENST00000494939 DIP2BQ9P265 1576 aa13.96□□□□□ -0.18
MKRN1-213ENST00000494939 POTEDQ86YR6 584 aa13.95□□□□□ -0.18
MKRN1-213ENST00000494939 KIF21BO75037 1637 aa13.92□□□□□ -0.18
MKRN1-213ENST00000494939 KDM5BQ9UGL1 1544 aa13.9□□□□□ -0.18
MKRN1-213ENST00000494939 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
MKRN1-213ENST00000494939 SAMD9Q5K651 1589 aa13.9□□□□□ -0.18
MKRN1-213ENST00000494939 PLB1Q6P1J6 1458 aa13.89□□□□□ -0.19
MKRN1-213ENST00000494939 FAM9AQ8IZU1 332 aaPredicted RBP13.89□□□□□ -0.19
MKRN1-213ENST00000494939 ZCCHC11Q5TAX3 1644 aaKnown RBP13.89□□□□□ -0.19
MKRN1-213ENST00000494939 ABCA8O94911 1581 aa13.88□□□□□ -0.19
MKRN1-213ENST00000494939 FAM69CQ0P6D2 419 aa13.88□□□□□ -0.19
MKRN1-213ENST00000494939 ASXL2Q76L83 1435 aa13.88□□□□□ -0.19
MKRN1-213ENST00000494939 ADRA2BP18089 450 aa13.86□□□□□ -0.19
MKRN1-213ENST00000494939 GLI2P10070 1586 aa13.84□□□□□ -0.19
MKRN1-213ENST00000494939 EPRSP07814 1512 aaKnown RBP13.81□□□□□ -0.2
MKRN1-213ENST00000494939 P3H3Q8IVL6 736 aa13.8□□□□□ -0.2
MKRN1-213ENST00000494939 WDR7Q9Y4E6 1490 aa13.8□□□□□ -0.2
MKRN1-213ENST00000494939 EFCAB5A4FU69 1503 aa13.8□□□□□ -0.2
MKRN1-213ENST00000494939 TSPOAP1O95153 1857 aa13.79□□□□□ -0.2
MKRN1-213ENST00000494939 PPRC1Q5VV67 1664 aaKnown RBP13.79□□□□□ -0.2
MKRN1-213ENST00000494939 MAP3K4Q9Y6R4 1608 aa13.78□□□□□ -0.2
MKRN1-213ENST00000494939 FHOD3Q2V2M9 1422 aa13.77□□□□□ -0.21
MKRN1-213ENST00000494939 RAPGEF6Q8TEU7 1601 aa13.77□□□□□ -0.21
MKRN1-213ENST00000494939 KDM6BO15054 1643 aa13.75□□□□□ -0.21
MKRN1-213ENST00000494939 RANGAP1P46060 587 aaPredicted RBP13.75□□□□□ -0.21
MKRN1-213ENST00000494939 ATP10BO94823 1461 aa13.74□□□□□ -0.21
MKRN1-213ENST00000494939 EHMT2Q96KQ7 1210 aa13.72□□□□□ -0.21
MKRN1-213ENST00000494939 NUP153P49790 1475 aaKnown RBP13.72□□□□□ -0.21
MKRN1-213ENST00000494939 UBTFP17480 764 aaKnown RBP13.71□□□□□ -0.21
MKRN1-213ENST00000494939 CFAP43Q8NDM7 1665 aa13.71□□□□□ -0.21
MKRN1-213ENST00000494939 TEX14Q8IWB6 1497 aa13.69□□□□□ -0.22
MKRN1-213ENST00000494939 ARHGAP35Q9NRY4 1499 aa13.69□□□□□ -0.22
MKRN1-213ENST00000494939 ARID3CA6NKF2 412 aa13.69□□□□□ -0.22
MKRN1-213ENST00000494939 MAGI3Q5TCQ9 1506 aa13.67□□□□□ -0.22
MKRN1-213ENST00000494939 KCNH8Q96L42 1107 aa13.66□□□□□ -0.22
MKRN1-213ENST00000494939 CD109Q6YHK3 1445 aa13.65□□□□□ -0.22
MKRN1-213ENST00000494939 ABCA9Q8IUA7 1624 aa13.65□□□□□ -0.22
MKRN1-213ENST00000494939 COL17A1Q9UMD9 1497 aaPredicted RBP13.64□□□□□ -0.23
MKRN1-213ENST00000494939 FMN1Q68DA7 1419 aa13.64□□□□□ -0.23
MKRN1-213ENST00000494939 HECW1Q76N89 1606 aa13.62□□□□□ -0.23
MKRN1-213ENST00000494939 CDK13Q14004 1512 aaKnown RBP13.61□□□□□ -0.23
MKRN1-213ENST00000494939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
MKRN1-213ENST00000494939 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
MKRN1-213ENST00000494939 PLEKHD1A6NEE1 506 aa13.56□□□□□ -0.24
MKRN1-213ENST00000494939 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.55□□□□□ -0.24
MKRN1-213ENST00000494939 ARAP3Q8WWN8 1544 aa13.55□□□□□ -0.24
MKRN1-213ENST00000494939 PCF11O94913 1555 aaKnown RBP13.55□□□□□ -0.24
MKRN1-213ENST00000494939 TTC37Q6PGP7 1564 aa13.55□□□□□ -0.24
MKRN1-213ENST00000494939 LRRIQ1Q96JM4 1722 aa13.55□□□□□ -0.24
MKRN1-213ENST00000494939 NEO1Q92859 1461 aa13.54□□□□□ -0.24
MKRN1-213ENST00000494939 PHLDB1Q86UU1 1377 aa13.53□□□□□ -0.24
MKRN1-213ENST00000494939 CLIP1P30622 1438 aa13.53□□□□□ -0.24
MKRN1-213ENST00000494939 CASKIN1Q8WXD9 1431 aa13.52□□□□□ -0.25
MKRN1-213ENST00000494939 ATP1B4Q9UN42 357 aaPredicted RBP13.51□□□□□ -0.25
MKRN1-213ENST00000494939 FRMPD1Q5SYB0 1578 aa13.49□□□□□ -0.25
MKRN1-213ENST00000494939 CFAP74Q9C0B2 1584 aa13.49□□□□□ -0.25
MKRN1-213ENST00000494939 CCDC18Q5T9S5 1454 aa13.49□□□□□ -0.25
MKRN1-213ENST00000494939 FYCO1Q9BQS8 1478 aa13.49□□□□□ -0.25
MKRN1-213ENST00000494939 KIF14Q15058 1648 aa13.49□□□□□ -0.25
MKRN1-213ENST00000494939 TROQ12816 1431 aaPredicted RBP13.48□□□□□ -0.25
MKRN1-213ENST00000494939 KDM4FA0A1W2PPD8 638 aa13.48□□□□□ -0.25
MKRN1-213ENST00000494939 FANCAO15360 1455 aa13.48□□□□□ -0.25
MKRN1-213ENST00000494939 CDK11AQ9UQ88 783 aaPredicted RBP13.47□□□□□ -0.25
MKRN1-213ENST00000494939 ADGRL1O94910 1474 aa13.46□□□□□ -0.25
MKRN1-213ENST00000494939 AKNAQ7Z591 1439 aa13.46□□□□□ -0.26
MKRN1-213ENST00000494939 MYO5CQ9NQX4 1742 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms