RNA–Protein interactions for RNA: ENST00000494939.1

MKRN1-213, Transcript of makorin ring finger protein 1, humanhuman

TSL 3

Gene MKRN1, Length 784 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-213ENST00000494939 NISCHQ9Y2I1 1504 aa20.55■□□□□ 0.88
MKRN1-213ENST00000494939 AEBP2Q6ZN18 517 aaPredicted RBP18.78■□□□□ 0.6
MKRN1-213ENST00000494939 CCDC180Q9P1Z9 1646 aa18.36■□□□□ 0.53
MKRN1-213ENST00000494939 ABCC9O60706 1549 aa18.06■□□□□ 0.48
MKRN1-213ENST00000494939 CHIC1Q5VXU3 224 aa17.77■□□□□ 0.44
MKRN1-213ENST00000494939 RB1CC1Q8TDY2 1594 aa17.32■□□□□ 0.36
MKRN1-213ENST00000494939 NACADO15069 1562 aa17.28■□□□□ 0.36
MKRN1-213ENST00000494939 MYO15BQ96JP2 1530 aa17.14■□□□□ 0.33
MKRN1-213ENST00000494939 DCAF8L2P0C7V8 631 aa17.12■□□□□ 0.33
MKRN1-213ENST00000494939 ZCCHC6Q5VYS8 1495 aaKnown RBP17.12■□□□□ 0.33
MKRN1-213ENST00000494939 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
MKRN1-213ENST00000494939 UNC13AQ9UPW8 1703 aa16.95■□□□□ 0.3
MKRN1-213ENST00000494939 BICRAQ9NZM4 1560 aa16.83■□□□□ 0.28
MKRN1-213ENST00000494939 PABPN1Q86U42 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
MKRN1-213ENST00000494939 SCRIBQ14160 1630 aa16.72■□□□□ 0.27
MKRN1-213ENST00000494939 DNAJC5BQ9UF47 199 aa16.68■□□□□ 0.26
MKRN1-213ENST00000494939 SHROOM4Q9ULL8 1493 aa16.65■□□□□ 0.26
MKRN1-213ENST00000494939 EIF4G1Q04637 1599 aaKnown RBP16.39■□□□□ 0.21
MKRN1-213ENST00000494939 CC2D2AQ9P2K1 1620 aa16.35■□□□□ 0.21
MKRN1-213ENST00000494939 CECR2Q9BXF3 1484 aa16.25■□□□□ 0.19
MKRN1-213ENST00000494939 SENP3Q9H4L4 574 aaPredicted RBP16.12■□□□□ 0.17
MKRN1-213ENST00000494939 SMARCA4P51532 1647 aa15.99■□□□□ 0.15
MKRN1-213ENST00000494939 BAZ1AQ9NRL2 1556 aaPredicted RBP15.94■□□□□ 0.14
MKRN1-213ENST00000494939 NCAPD3P42695 1498 aa15.93■□□□□ 0.14
MKRN1-213ENST00000494939 ATAD2BQ9ULI0 1458 aa15.92■□□□□ 0.14
MKRN1-213ENST00000494939 SMARCA2P51531 1590 aa15.9■□□□□ 0.14
MKRN1-213ENST00000494939 HMGXB3Q12766 1538 aa15.87■□□□□ 0.13
MKRN1-213ENST00000494939 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
MKRN1-213ENST00000494939 PEG3Q9GZU2 1588 aa15.85■□□□□ 0.13
MKRN1-213ENST00000494939 MROH2BQ7Z745 1585 aa15.83■□□□□ 0.13
MKRN1-213ENST00000494939 BAZ1BQ9UIG0 1483 aaKnown RBP15.78■□□□□ 0.12
MKRN1-213ENST00000494939 WIZO95785 1651 aa15.66■□□□□ 0.1
MKRN1-213ENST00000494939 NESP48681 1621 aa15.6■□□□□ 0.09
MKRN1-213ENST00000494939 RSF1Q96T23 1441 aaPredicted RBP15.6■□□□□ 0.09
MKRN1-213ENST00000494939 ERCC6Q03468 1493 aa15.57■□□□□ 0.08
MKRN1-213ENST00000494939 LAMC3Q9Y6N6 1575 aa15.55■□□□□ 0.08
MKRN1-213ENST00000494939 TOP2AP11388 1531 aaKnown RBP15.49■□□□□ 0.07
MKRN1-213ENST00000494939 CUX2O14529 1486 aa15.48■□□□□ 0.07
MKRN1-213ENST00000494939 CADPSQ9ULU8 1353 aa15.44■□□□□ 0.06
MKRN1-213ENST00000494939 THOC2Q8NI27 1593 aaKnown RBP15.43■□□□□ 0.06
MKRN1-213ENST00000494939 KIF21AQ7Z4S6 1674 aa15.43■□□□□ 0.06
MKRN1-213ENST00000494939 PDS5BQ9NTI5 1447 aa15.42■□□□□ 0.06
MKRN1-213ENST00000494939 CFTRP13569 1480 aa15.34■□□□□ 0.05
MKRN1-213ENST00000494939 MRC2Q9UBG0 1479 aa15.29■□□□□ 0.04
MKRN1-213ENST00000494939 CCDC88BA6NC98 1476 aa15.28■□□□□ 0.04
MKRN1-213ENST00000494939 FANCD2Q9BXW9 1451 aa15.28■□□□□ 0.04
MKRN1-213ENST00000494939 CEP164Q9UPV0 1460 aa15.28■□□□□ 0.04
MKRN1-213ENST00000494939 WDR62O43379 1518 aa15.27■□□□□ 0.03
MKRN1-213ENST00000494939 PRDM2Q13029 1718 aa15.24■□□□□ 0.03
MKRN1-213ENST00000494939 URB2Q14146 1524 aaKnown RBP15.15■□□□□ 0.02
MKRN1-213ENST00000494939 DNAJC5Q9H3Z4 198 aa15.12■□□□□ 0.01
MKRN1-213ENST00000494939 TOPBP1Q92547 1522 aa15.02■□□□□ -0
MKRN1-213ENST00000494939 SUPT5HO00267 1087 aaKnown RBP15.02■□□□□ -0
MKRN1-213ENST00000494939 DNMBPQ6XZF7 1577 aa15.01□□□□□ -0.01
MKRN1-213ENST00000494939 ABCC8Q09428 1581 aa15□□□□□ -0.01
MKRN1-213ENST00000494939 FOXD1Q16676 465 aa14.99□□□□□ -0.01
MKRN1-213ENST00000494939 IFT140Q96RY7 1462 aa14.96□□□□□ -0.01
MKRN1-213ENST00000494939 ZNF608Q9ULD9 1512 aaPredicted RBP14.92□□□□□ -0.02
MKRN1-213ENST00000494939 POLA1P09884 1462 aaPredicted RBP14.89□□□□□ -0.03
MKRN1-213ENST00000494939 TARBP1Q13395 1621 aaKnown RBP14.89□□□□□ -0.03
MKRN1-213ENST00000494939 CUX1P39880 1505 aa14.87□□□□□ -0.03
MKRN1-213ENST00000494939 EIF4G3O43432 1585 aaKnown RBP14.87□□□□□ -0.03
MKRN1-213ENST00000494939 FGD5Q6ZNL6 1462 aa14.83□□□□□ -0.03
MKRN1-213ENST00000494939 RAD54L2Q9Y4B4 1467 aa14.82□□□□□ -0.04
MKRN1-213ENST00000494939 AQRO60306 1485 aaKnown RBP eCLIP14.79□□□□□ -0.04
MKRN1-213ENST00000494939 SOGA1O94964 1423 aa14.79□□□□□ -0.04
MKRN1-213ENST00000494939 WDR97A6NE52 1622 aa14.77□□□□□ -0.04
MKRN1-213ENST00000494939 OSCARQ8IYS5 282 aa14.75□□□□□ -0.05
MKRN1-213ENST00000494939 TDRD9Q8NDG6 1382 aaKnown RBP14.73□□□□□ -0.05
MKRN1-213ENST00000494939 BIVM-ERCC5R4GMW8 1640 aa14.72□□□□□ -0.05
MKRN1-213ENST00000494939 TOP2BQ02880 1626 aa14.7□□□□□ -0.06
MKRN1-213ENST00000494939 CHD1O14646 1710 aa14.7□□□□□ -0.06
MKRN1-213ENST00000494939 SYNJ1O43426 1573 aa14.7□□□□□ -0.06
MKRN1-213ENST00000494939 WRNQ14191 1432 aaPredicted RBP eCLIP14.7□□□□□ -0.06
MKRN1-213ENST00000494939 ABCA10Q8WWZ4 1543 aa14.69□□□□□ -0.06
MKRN1-213ENST00000494939 SNAPC4Q5SXM2 1469 aa14.68□□□□□ -0.06
MKRN1-213ENST00000494939 ABCA5Q8WWZ7 1642 aa14.66□□□□□ -0.06
MKRN1-213ENST00000494939 GRIN2BQ13224 1484 aa14.66□□□□□ -0.06
MKRN1-213ENST00000494939 PBRM1Q86U86 1689 aa14.65□□□□□ -0.06
MKRN1-213ENST00000494939 MAGI1Q96QZ7 1491 aaPredicted RBP14.64□□□□□ -0.07
MKRN1-213ENST00000494939 GAPVD1Q14C86 1478 aa14.63□□□□□ -0.07
MKRN1-213ENST00000494939 RIMBP3CA6NJZ7 1639 aa14.6□□□□□ -0.07
MKRN1-213ENST00000494939 RIMBP3BA6NNM3 1639 aa14.6□□□□□ -0.07
MKRN1-213ENST00000494939 RIMBP3Q9UFD9 1639 aa14.6□□□□□ -0.07
MKRN1-213ENST00000494939 SYNJ2O15056 1496 aa14.59□□□□□ -0.07
MKRN1-213ENST00000494939 FBLN2P98095 1184 aa14.59□□□□□ -0.07
MKRN1-213ENST00000494939 ARHGEF11O15085 1522 aa14.58□□□□□ -0.08
MKRN1-213ENST00000494939 CLASP1Q7Z460 1538 aa14.56□□□□□ -0.08
MKRN1-213ENST00000494939 TRIM41Q8WV44 630 aa14.55□□□□□ -0.08
MKRN1-213ENST00000494939 CHMP7Q8WUX9 453 aaPredicted RBP14.54□□□□□ -0.08
MKRN1-213ENST00000494939 ADAMTS12P58397 1594 aa14.53□□□□□ -0.08
MKRN1-213ENST00000494939 ERICH3Q5RHP9 1530 aa14.51□□□□□ -0.09
MKRN1-213ENST00000494939 GRIN2AQ12879 1464 aa14.48□□□□□ -0.09
MKRN1-213ENST00000494939 FHAD1B1AJZ9 1412 aa14.47□□□□□ -0.09
MKRN1-213ENST00000494939 ARAP1Q96P48 1450 aa14.45□□□□□ -0.1
MKRN1-213ENST00000494939 CEP170Q5SW79 1584 aa14.43□□□□□ -0.1
MKRN1-213ENST00000494939 NUP160Q12769 1436 aa14.43□□□□□ -0.1
MKRN1-213ENST00000494939 KIF27Q86VH2 1401 aa14.4□□□□□ -0.1
MKRN1-213ENST00000494939 CYB5RLQ6IPT4 315 aa14.38□□□□□ -0.11
MKRN1-213ENST00000494939 CUL7Q14999 1698 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms