RNA–Protein interactions for RNA: ENST00000491344.7

SLC38A6-204, Transcript of solute carrier family 38 member 6, humanhuman

TSL 1 (best)

Gene SLC38A6, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-204ENST00000491344 TTBK1Q5TCY1 1321 aaPredicted RBP13.59□□□□□ -0.23
SLC38A6-204ENST00000491344 FBLN2P98095 1184 aa13.57□□□□□ -0.24
SLC38A6-204ENST00000491344 P3H3Q8IVL6 736 aa13.57□□□□□ -0.24
SLC38A6-204ENST00000491344 VPS8Q8N3P4 1428 aa13.56□□□□□ -0.24
SLC38A6-204ENST00000491344 MAGI1Q96QZ7 1491 aaPredicted RBP13.55□□□□□ -0.24
SLC38A6-204ENST00000491344 GRIN2AQ12879 1464 aa13.54□□□□□ -0.24
SLC38A6-204ENST00000491344 CHMP7Q8WUX9 453 aaPredicted RBP13.53□□□□□ -0.24
SLC38A6-204ENST00000491344 PCGF6Q9BYE7 350 aa13.53□□□□□ -0.24
SLC38A6-204ENST00000491344 SYNJ2O15056 1496 aa13.52□□□□□ -0.24
SLC38A6-204ENST00000491344 FHOD3Q2V2M9 1422 aa13.51□□□□□ -0.25
SLC38A6-204ENST00000491344 IQGAP2Q13576 1575 aa13.49□□□□□ -0.25
SLC38A6-204ENST00000491344 CEP170Q5SW79 1584 aa13.48□□□□□ -0.25
SLC38A6-204ENST00000491344 EFCAB5A4FU69 1503 aa13.45□□□□□ -0.26
SLC38A6-204ENST00000491344 SAMD9Q5K651 1589 aa13.45□□□□□ -0.26
SLC38A6-204ENST00000491344 TRIM26Q12899 539 aaPredicted RBP13.45□□□□□ -0.26
SLC38A6-204ENST00000491344 CHD1O14646 1710 aa13.44□□□□□ -0.26
SLC38A6-204ENST00000491344 KIAA0586Q9BVV6 1533 aa13.43□□□□□ -0.26
SLC38A6-204ENST00000491344 APLP2Q06481 763 aa13.43□□□□□ -0.26
SLC38A6-204ENST00000491344 PCF11O94913 1555 aaKnown RBP13.42□□□□□ -0.26
SLC38A6-204ENST00000491344 ATP1B4Q9UN42 357 aaPredicted RBP13.42□□□□□ -0.26
SLC38A6-204ENST00000491344 NUP160Q12769 1436 aa13.41□□□□□ -0.26
SLC38A6-204ENST00000491344 UGGT2Q9NYU1 1516 aa13.38□□□□□ -0.27
SLC38A6-204ENST00000491344 KANK4Q5T7N3 995 aaPredicted RBP13.38□□□□□ -0.27
SLC38A6-204ENST00000491344 DISP1Q96F81 1524 aa13.37□□□□□ -0.27
SLC38A6-204ENST00000491344 KIAA0556O60303 1618 aa13.36□□□□□ -0.27
SLC38A6-204ENST00000491344 FMN1Q68DA7 1419 aa13.35□□□□□ -0.27
SLC38A6-204ENST00000491344 JPH4Q96JJ6 628 aa13.34□□□□□ -0.27
SLC38A6-204ENST00000491344 CASKIN1Q8WXD9 1431 aa13.33□□□□□ -0.28
SLC38A6-204ENST00000491344 TIAM1Q13009 1591 aa13.33□□□□□ -0.28
SLC38A6-204ENST00000491344 FYCO1Q9BQS8 1478 aa13.33□□□□□ -0.28
SLC38A6-204ENST00000491344 LRRIQ1Q96JM4 1722 aa13.31□□□□□ -0.28
SLC38A6-204ENST00000491344 ARID3CA6NKF2 412 aa13.31□□□□□ -0.28
SLC38A6-204ENST00000491344 CFAP43Q8NDM7 1665 aa13.29□□□□□ -0.28
SLC38A6-204ENST00000491344 PRG4Q92954 1404 aaPredicted RBP13.27□□□□□ -0.28
SLC38A6-204ENST00000491344 CARMIL2Q6F5E8 1435 aa13.26□□□□□ -0.29
SLC38A6-204ENST00000491344 LRRC9Q6ZRR7 1453 aa13.26□□□□□ -0.29
SLC38A6-204ENST00000491344 ERCC6L2Q5T890 1561 aa13.25□□□□□ -0.29
SLC38A6-204ENST00000491344 MAP3K1Q13233 1512 aa13.25□□□□□ -0.29
SLC38A6-204ENST00000491344 CDK13Q14004 1512 aaKnown RBP13.24□□□□□ -0.29
SLC38A6-204ENST00000491344 PLB1Q6P1J6 1458 aa13.24□□□□□ -0.29
SLC38A6-204ENST00000491344 HECW1Q76N89 1606 aa13.24□□□□□ -0.29
SLC38A6-204ENST00000491344 CLASP1Q7Z460 1538 aa13.24□□□□□ -0.29
SLC38A6-204ENST00000491344 SHROOM2Q13796 1616 aa13.22□□□□□ -0.29
SLC38A6-204ENST00000491344 RAPGEF6Q8TEU7 1601 aa13.22□□□□□ -0.29
SLC38A6-204ENST00000491344 EPRSP07814 1512 aaKnown RBP13.21□□□□□ -0.29
SLC38A6-204ENST00000491344 NUP153P49790 1475 aaKnown RBP13.2□□□□□ -0.3
SLC38A6-204ENST00000491344 MAGI3Q5TCQ9 1506 aa13.2□□□□□ -0.3
SLC38A6-204ENST00000491344 MTUS2Q5JR59 1369 aa13.19□□□□□ -0.3
SLC38A6-204ENST00000491344 PHLDB1Q86UU1 1377 aa13.19□□□□□ -0.3
SLC38A6-204ENST00000491344 CCDC18Q5T9S5 1454 aa13.18□□□□□ -0.3
SLC38A6-204ENST00000491344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.17□□□□□ -0.3
SLC38A6-204ENST00000491344 HNRNPUL2Q1KMD3 747 aaKnown RBP13.17□□□□□ -0.3
SLC38A6-204ENST00000491344 PTPRGP23470 1445 aa13.17□□□□□ -0.3
SLC38A6-204ENST00000491344 ABCA8O94911 1581 aa13.15□□□□□ -0.3
SLC38A6-204ENST00000491344 OSCARQ8IYS5 282 aa13.13□□□□□ -0.31
SLC38A6-204ENST00000491344 EHBP1L1Q8N3D4 1523 aa13.13□□□□□ -0.31
SLC38A6-204ENST00000491344 RRBP1Q9P2E9 1410 aaKnown RBP13.13□□□□□ -0.31
SLC38A6-204ENST00000491344 NCOA2Q15596 1464 aa13.12□□□□□ -0.31
SLC38A6-204ENST00000491344 CCNB3Q8WWL7 1395 aa13.12□□□□□ -0.31
SLC38A6-204ENST00000491344 ITGAEP38570 1179 aa13.11□□□□□ -0.31
SLC38A6-204ENST00000491344 SUPT6HQ7KZ85 1726 aaKnown RBP13.11□□□□□ -0.31
SLC38A6-204ENST00000491344 FAM50AQ14320 339 aaKnown RBP13.09□□□□□ -0.31
SLC38A6-204ENST00000491344 ATP10BO94823 1461 aa13.08□□□□□ -0.32
SLC38A6-204ENST00000491344 UACAQ9BZF9 1416 aa13.08□□□□□ -0.32
SLC38A6-204ENST00000491344 ARHGEF11O15085 1522 aa13.06□□□□□ -0.32
SLC38A6-204ENST00000491344 FGD6Q6ZV73 1430 aa13.05□□□□□ -0.32
SLC38A6-204ENST00000491344 CDK11AQ9UQ88 783 aaPredicted RBP13.05□□□□□ -0.32
SLC38A6-204ENST00000491344 MYOM3Q5VTT5 1437 aa13.04□□□□□ -0.32
SLC38A6-204ENST00000491344 KIF14Q15058 1648 aa13.04□□□□□ -0.32
SLC38A6-204ENST00000491344 ABCC2Q92887 1545 aa13.04□□□□□ -0.32
SLC38A6-204ENST00000491344 TROQ12816 1431 aaPredicted RBP13.03□□□□□ -0.32
SLC38A6-204ENST00000491344 HRCP23327 699 aa13.03□□□□□ -0.32
SLC38A6-204ENST00000491344 PLEKHD1A6NEE1 506 aa13.01□□□□□ -0.33
SLC38A6-204ENST00000491344 PTPN23Q9H3S7 1636 aa13□□□□□ -0.33
SLC38A6-204ENST00000491344 ADCY10Q96PN6 1610 aa12.99□□□□□ -0.33
SLC38A6-204ENST00000491344 ZCCHC11Q5TAX3 1644 aaKnown RBP12.98□□□□□ -0.33
SLC38A6-204ENST00000491344 CCER1Q8TC90 406 aaPredicted RBP12.98□□□□□ -0.33
SLC38A6-204ENST00000491344 ZNF644Q9H582 1327 aaPredicted RBP12.96□□□□□ -0.33
SLC38A6-204ENST00000491344 UHRF1BP1LA0JNW5 1464 aa12.96□□□□□ -0.33
SLC38A6-204ENST00000491344 PTPRKQ15262 1439 aa12.95□□□□□ -0.34
SLC38A6-204ENST00000491344 KDM5BQ9UGL1 1544 aa12.95□□□□□ -0.34
SLC38A6-204ENST00000491344 KCNH8Q96L42 1107 aa12.95□□□□□ -0.34
SLC38A6-204ENST00000491344 GPATCH8Q9UKJ3 1502 aaKnown RBP12.94□□□□□ -0.34
SLC38A6-204ENST00000491344 ABCC10Q5T3U5 1492 aa12.93□□□□□ -0.34
SLC38A6-204ENST00000491344 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.93□□□□□ -0.34
SLC38A6-204ENST00000491344 ZNF777Q9ULD5 760 aaPredicted RBP12.93□□□□□ -0.34
SLC38A6-204ENST00000491344 MIA2Q96PC5 1412 aa12.93□□□□□ -0.34
SLC38A6-204ENST00000491344 CDC42BPAQ5VT25 1732 aa12.92□□□□□ -0.34
SLC38A6-204ENST00000491344 TCOF1Q13428 1488 aaKnown RBP12.92□□□□□ -0.34
SLC38A6-204ENST00000491344 CFDP1Q9UEE9 299 aaPredicted RBP12.92□□□□□ -0.34
SLC38A6-204ENST00000491344 ITSN2Q9NZM3 1697 aa12.91□□□□□ -0.34
SLC38A6-204ENST00000491344 TTC37Q6PGP7 1564 aa12.91□□□□□ -0.34
SLC38A6-204ENST00000491344 CHIC2Q9UKJ5 165 aa12.91□□□□□ -0.34
SLC38A6-204ENST00000491344 RAB3GAP2Q9H2M9 1393 aa12.9□□□□□ -0.35
SLC38A6-204ENST00000491344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.89□□□□□ -0.35
SLC38A6-204ENST00000491344 CAMSAP2Q08AD1 1489 aa12.89□□□□□ -0.35
SLC38A6-204ENST00000491344 RIMBP3CA6NJZ7 1639 aa12.89□□□□□ -0.35
SLC38A6-204ENST00000491344 RIMBP3BA6NNM3 1639 aa12.89□□□□□ -0.35
SLC38A6-204ENST00000491344 RIMBP3Q9UFD9 1639 aa12.89□□□□□ -0.35
SLC38A6-204ENST00000491344 CYB5RLQ6IPT4 315 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms