RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 TDRD9Q8NDG6 1382 aaKnown RBP21.65■■□□□ 1.06
RPL13A-212ENST00000488946 TTBK1Q5TCY1 1321 aaPredicted RBP21.64■■□□□ 1.05
RPL13A-212ENST00000488946 CTTNBP2Q8WZ74 1663 aa21.64■■□□□ 1.05
RPL13A-212ENST00000488946 GAPVD1Q14C86 1478 aa21.62■■□□□ 1.05
RPL13A-212ENST00000488946 APLP2Q06481 763 aa21.6■■□□□ 1.05
RPL13A-212ENST00000488946 EFCAB5A4FU69 1503 aa21.57■■□□□ 1.04
RPL13A-212ENST00000488946 PBRM1Q86U86 1689 aa21.54■■□□□ 1.04
RPL13A-212ENST00000488946 MAP3K1Q13233 1512 aa21.54■■□□□ 1.04
RPL13A-212ENST00000488946 GRIN2BQ13224 1484 aa21.53■■□□□ 1.04
RPL13A-212ENST00000488946 TIAM1Q13009 1591 aa21.47■■□□□ 1.03
RPL13A-212ENST00000488946 FHAD1B1AJZ9 1412 aa21.47■■□□□ 1.03
RPL13A-212ENST00000488946 CFAP43Q8NDM7 1665 aa21.45■■□□□ 1.02
RPL13A-212ENST00000488946 ADAMTS12P58397 1594 aa21.45■■□□□ 1.02
RPL13A-212ENST00000488946 SNAPC4Q5SXM2 1469 aa21.45■■□□□ 1.02
RPL13A-212ENST00000488946 MAGI1Q96QZ7 1491 aaPredicted RBP21.45■■□□□ 1.02
RPL13A-212ENST00000488946 PCF11O94913 1555 aaKnown RBP21.45■■□□□ 1.02
RPL13A-212ENST00000488946 SAMD9Q5K651 1589 aa21.44■■□□□ 1.02
RPL13A-212ENST00000488946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.42■■□□□ 1.02
RPL13A-212ENST00000488946 KANK4Q5T7N3 995 aaPredicted RBP21.42■■□□□ 1.02
RPL13A-212ENST00000488946 RRBP1Q9P2E9 1410 aaKnown RBP21.39■■□□□ 1.02
RPL13A-212ENST00000488946 FYCO1Q9BQS8 1478 aa21.39■■□□□ 1.01
RPL13A-212ENST00000488946 CHD1O14646 1710 aa21.39■■□□□ 1.01
RPL13A-212ENST00000488946 FHOD3Q2V2M9 1422 aa21.38■■□□□ 1.01
RPL13A-212ENST00000488946 FBLN2P98095 1184 aa21.38■■□□□ 1.01
RPL13A-212ENST00000488946 CCER1Q8TC90 406 aaPredicted RBP21.38■■□□□ 1.01
RPL13A-212ENST00000488946 OSCARQ8IYS5 282 aa21.37■■□□□ 1.01
RPL13A-212ENST00000488946 SYNJ2O15056 1496 aa21.36■■□□□ 1.01
RPL13A-212ENST00000488946 CHMP7Q8WUX9 453 aaPredicted RBP21.36■■□□□ 1.01
RPL13A-212ENST00000488946 CASKIN1Q8WXD9 1431 aa21.34■■□□□ 1.01
RPL13A-212ENST00000488946 LRRC9Q6ZRR7 1453 aa21.33■■□□□ 1.01
RPL13A-212ENST00000488946 FMN1Q68DA7 1419 aa21.31■■□□□ 1
RPL13A-212ENST00000488946 DNAJC5Q9H3Z4 198 aa21.31■■□□□ 1
RPL13A-212ENST00000488946 IQGAP2Q13576 1575 aa21.28■■□□□ 1
RPL13A-212ENST00000488946 HNRNPUL2Q1KMD3 747 aaKnown RBP21.27■■□□□ 1
RPL13A-212ENST00000488946 P3H3Q8IVL6 736 aa21.25■□□□□ 0.99
RPL13A-212ENST00000488946 GRIN2AQ12879 1464 aa21.24■□□□□ 0.99
RPL13A-212ENST00000488946 CCNB3Q8WWL7 1395 aa21.24■□□□□ 0.99
RPL13A-212ENST00000488946 LRRIQ1Q96JM4 1722 aa21.2■□□□□ 0.98
RPL13A-212ENST00000488946 UGGT2Q9NYU1 1516 aa21.19■□□□□ 0.98
RPL13A-212ENST00000488946 ACIN1Q9UKV3 1341 aaKnown RBP21.18■□□□□ 0.98
RPL13A-212ENST00000488946 PHLDB1Q86UU1 1377 aa21.15■□□□□ 0.98
RPL13A-212ENST00000488946 NUP160Q12769 1436 aa21.13■□□□□ 0.97
RPL13A-212ENST00000488946 CLASP1Q7Z460 1538 aa21.13■□□□□ 0.97
RPL13A-212ENST00000488946 KIAA0586Q9BVV6 1533 aa21.13■□□□□ 0.97
RPL13A-212ENST00000488946 CEP170Q5SW79 1584 aa21.11■□□□□ 0.97
RPL13A-212ENST00000488946 HECW1Q76N89 1606 aa21.1■□□□□ 0.97
RPL13A-212ENST00000488946 CCDC18Q5T9S5 1454 aa21.08■□□□□ 0.96
RPL13A-212ENST00000488946 KIAA0556O60303 1618 aa21.07■□□□□ 0.96
RPL13A-212ENST00000488946 EHBP1L1Q8N3D4 1523 aa21.07■□□□□ 0.96
RPL13A-212ENST00000488946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.05■□□□□ 0.96
RPL13A-212ENST00000488946 NEUROD1Q13562 356 aa21.05■□□□□ 0.96
RPL13A-212ENST00000488946 ATP1B4Q9UN42 357 aaPredicted RBP21.04■□□□□ 0.96
RPL13A-212ENST00000488946 DISP1Q96F81 1524 aa21.04■□□□□ 0.96
RPL13A-212ENST00000488946 DHX57Q6P158 1386 aaKnown RBP21.03■□□□□ 0.96
RPL13A-212ENST00000488946 CLSPNQ9HAW4 1339 aa21.02■□□□□ 0.96
RPL13A-212ENST00000488946 SUPT6HQ7KZ85 1726 aaKnown RBP21.02■□□□□ 0.96
RPL13A-212ENST00000488946 ARHGEF11O15085 1522 aa21■□□□□ 0.95
RPL13A-212ENST00000488946 MTUS2Q5JR59 1369 aa21■□□□□ 0.95
RPL13A-212ENST00000488946 GTF3C3Q9Y5Q9 886 aa20.99■□□□□ 0.95
RPL13A-212ENST00000488946 MAGI3Q5TCQ9 1506 aa20.99■□□□□ 0.95
RPL13A-212ENST00000488946 FGD6Q6ZV73 1430 aa20.98■□□□□ 0.95
RPL13A-212ENST00000488946 RIMBP3CA6NJZ7 1639 aa20.98■□□□□ 0.95
RPL13A-212ENST00000488946 RIMBP3BA6NNM3 1639 aa20.98■□□□□ 0.95
RPL13A-212ENST00000488946 RIMBP3Q9UFD9 1639 aa20.98■□□□□ 0.95
RPL13A-212ENST00000488946 EPRSP07814 1512 aaKnown RBP20.97■□□□□ 0.95
RPL13A-212ENST00000488946 NCOA2Q15596 1464 aa20.97■□□□□ 0.95
RPL13A-212ENST00000488946 SHROOM2Q13796 1616 aa20.96■□□□□ 0.95
RPL13A-212ENST00000488946 DIEXFQ68CQ4 756 aaKnown RBP20.95■□□□□ 0.94
RPL13A-212ENST00000488946 JPH4Q96JJ6 628 aa20.95■□□□□ 0.94
RPL13A-212ENST00000488946 BCL11AQ9H165 835 aa20.94■□□□□ 0.94
RPL13A-212ENST00000488946 MYOM3Q5VTT5 1437 aa20.92■□□□□ 0.94
RPL13A-212ENST00000488946 RAPGEF6Q8TEU7 1601 aa20.91■□□□□ 0.94
RPL13A-212ENST00000488946 RAB3GAP2Q9H2M9 1393 aa20.9■□□□□ 0.94
RPL13A-212ENST00000488946 CDK13Q14004 1512 aaKnown RBP20.9■□□□□ 0.94
RPL13A-212ENST00000488946 SETD5Q9C0A6 1442 aa20.9■□□□□ 0.94
RPL13A-212ENST00000488946 PRG4Q92954 1404 aaPredicted RBP20.88■□□□□ 0.93
RPL13A-212ENST00000488946 CENPBP07199 599 aaPredicted RBP20.88■□□□□ 0.93
RPL13A-212ENST00000488946 FAM50AQ14320 339 aaKnown RBP20.88■□□□□ 0.93
RPL13A-212ENST00000488946 ITGAEP38570 1179 aa20.87■□□□□ 0.93
RPL13A-212ENST00000488946 NUP153P49790 1475 aaKnown RBP20.86■□□□□ 0.93
RPL13A-212ENST00000488946 PTPN23Q9H3S7 1636 aa20.86■□□□□ 0.93
RPL13A-212ENST00000488946 TCOF1Q13428 1488 aaKnown RBP20.84■□□□□ 0.93
RPL13A-212ENST00000488946 ERCC6L2Q5T890 1561 aa20.84■□□□□ 0.93
RPL13A-212ENST00000488946 MAPKBP1O60336 1514 aa20.82■□□□□ 0.92
RPL13A-212ENST00000488946 CYB5RLQ6IPT4 315 aa20.8■□□□□ 0.92
RPL13A-212ENST00000488946 CARMIL2Q6F5E8 1435 aa20.8■□□□□ 0.92
RPL13A-212ENST00000488946 MIA2Q96PC5 1412 aa20.77■□□□□ 0.92
RPL13A-212ENST00000488946 PTPRKQ15262 1439 aa20.76■□□□□ 0.91
RPL13A-212ENST00000488946 HFM1A2PYH4 1435 aa20.76■□□□□ 0.91
RPL13A-212ENST00000488946 PRKCSHP14314 528 aaPredicted RBP20.74■□□□□ 0.91
RPL13A-212ENST00000488946 ABCA8O94911 1581 aa20.73■□□□□ 0.91
RPL13A-212ENST00000488946 ZNF316A6NFI3 1004 aaPredicted RBP20.73■□□□□ 0.91
RPL13A-212ENST00000488946 ADCY10Q96PN6 1610 aa20.73■□□□□ 0.91
RPL13A-212ENST00000488946 PLB1Q6P1J6 1458 aa20.72■□□□□ 0.91
RPL13A-212ENST00000488946 GCC2Q8IWJ2 1684 aa20.7■□□□□ 0.91
RPL13A-212ENST00000488946 AKNAQ7Z591 1439 aa20.69■□□□□ 0.9
RPL13A-212ENST00000488946 TROQ12816 1431 aaPredicted RBP20.68■□□□□ 0.9
RPL13A-212ENST00000488946 NAIPQ13075 1403 aa20.68■□□□□ 0.9
RPL13A-212ENST00000488946 PTPRGP23470 1445 aa20.66■□□□□ 0.9
RPL13A-212ENST00000488946 ITSN2Q9NZM3 1697 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms