RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 FHAD1B1AJZ9 1412 aa31.5■■■□□ 2.63
NECAB3-213ENST00000488489 ADAMTS12P58397 1594 aa31.48■■■□□ 2.63
NECAB3-213ENST00000488489 CTTNBP2Q8WZ74 1663 aa31.48■■■□□ 2.63
NECAB3-213ENST00000488489 TTBK1Q5TCY1 1321 aaPredicted RBP31.44■■■□□ 2.62
NECAB3-213ENST00000488489 SNAPC4Q5SXM2 1469 aa31.38■■■□□ 2.61
NECAB3-213ENST00000488489 P3H3Q8IVL6 736 aa31.33■■■□□ 2.61
NECAB3-213ENST00000488489 APLP2Q06481 763 aa31.31■■■□□ 2.6
NECAB3-213ENST00000488489 EFCAB5A4FU69 1503 aa31.29■■■□□ 2.6
NECAB3-213ENST00000488489 MAGI1Q96QZ7 1491 aaPredicted RBP31.26■■■□□ 2.6
NECAB3-213ENST00000488489 FHOD3Q2V2M9 1422 aa31.25■■■□□ 2.59
NECAB3-213ENST00000488489 GRIN2AQ12879 1464 aa31.21■■■□□ 2.59
NECAB3-213ENST00000488489 SAMD9Q5K651 1589 aa31.19■■■□□ 2.58
NECAB3-213ENST00000488489 SYNJ2O15056 1496 aa31.18■■■□□ 2.58
NECAB3-213ENST00000488489 IQGAP2Q13576 1575 aa31.17■■■□□ 2.58
NECAB3-213ENST00000488489 KANK4Q5T7N3 995 aaPredicted RBP31.15■■■□□ 2.58
NECAB3-213ENST00000488489 CHMP7Q8WUX9 453 aaPredicted RBP31.15■■■□□ 2.58
NECAB3-213ENST00000488489 FBLN2P98095 1184 aa31.09■■■□□ 2.57
NECAB3-213ENST00000488489 PCF11O94913 1555 aaKnown RBP31.09■■■□□ 2.57
NECAB3-213ENST00000488489 KIAA0586Q9BVV6 1533 aa31.09■■■□□ 2.57
NECAB3-213ENST00000488489 FMN1Q68DA7 1419 aa31.04■■■□□ 2.56
NECAB3-213ENST00000488489 CEP170Q5SW79 1584 aa31.04■■■□□ 2.56
NECAB3-213ENST00000488489 CASKIN1Q8WXD9 1431 aa31.02■■■□□ 2.56
NECAB3-213ENST00000488489 UGGT2Q9NYU1 1516 aa31.02■■■□□ 2.56
NECAB3-213ENST00000488489 TIAM1Q13009 1591 aa31.01■■■□□ 2.56
NECAB3-213ENST00000488489 MAP3K1Q13233 1512 aa31.01■■■□□ 2.55
NECAB3-213ENST00000488489 FYCO1Q9BQS8 1478 aa31■■■□□ 2.55
NECAB3-213ENST00000488489 ATP1B4Q9UN42 357 aaPredicted RBP30.98■■■□□ 2.55
NECAB3-213ENST00000488489 NUP160Q12769 1436 aa30.97■■■□□ 2.55
NECAB3-213ENST00000488489 DISP1Q96F81 1524 aa30.91■■■□□ 2.54
NECAB3-213ENST00000488489 CFAP43Q8NDM7 1665 aa30.9■■■□□ 2.54
NECAB3-213ENST00000488489 LRRC9Q6ZRR7 1453 aa30.89■■■□□ 2.54
NECAB3-213ENST00000488489 KIAA0556O60303 1618 aa30.86■■■□□ 2.53
NECAB3-213ENST00000488489 LRRIQ1Q96JM4 1722 aa30.82■■■□□ 2.52
NECAB3-213ENST00000488489 CHD1O14646 1710 aa30.81■■■□□ 2.52
NECAB3-213ENST00000488489 JPH4Q96JJ6 628 aa30.8■■■□□ 2.52
NECAB3-213ENST00000488489 RRBP1Q9P2E9 1410 aaKnown RBP30.73■■■□□ 2.51
NECAB3-213ENST00000488489 HNRNPUL2Q1KMD3 747 aaKnown RBP30.71■■■□□ 2.51
NECAB3-213ENST00000488489 HECW1Q76N89 1606 aa30.68■■■□□ 2.5
NECAB3-213ENST00000488489 PHLDB1Q86UU1 1377 aa30.67■■■□□ 2.5
NECAB3-213ENST00000488489 CARMIL2Q6F5E8 1435 aa30.66■■■□□ 2.5
NECAB3-213ENST00000488489 CCNB3Q8WWL7 1395 aa30.63■■■□□ 2.49
NECAB3-213ENST00000488489 EPRSP07814 1512 aaKnown RBP30.63■■■□□ 2.49
NECAB3-213ENST00000488489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.63■■■□□ 2.49
NECAB3-213ENST00000488489 CCDC18Q5T9S5 1454 aa30.63■■■□□ 2.49
NECAB3-213ENST00000488489 MTUS2Q5JR59 1369 aa30.62■■■□□ 2.49
NECAB3-213ENST00000488489 CDK13Q14004 1512 aaKnown RBP30.58■■■□□ 2.49
NECAB3-213ENST00000488489 MAGI3Q5TCQ9 1506 aa30.58■■■□□ 2.49
NECAB3-213ENST00000488489 ARID3CA6NKF2 412 aa30.58■■■□□ 2.49
NECAB3-213ENST00000488489 RAPGEF6Q8TEU7 1601 aa30.57■■■□□ 2.48
NECAB3-213ENST00000488489 PRG4Q92954 1404 aaPredicted RBP30.56■■■□□ 2.48
NECAB3-213ENST00000488489 NUP153P49790 1475 aaKnown RBP30.56■■■□□ 2.48
NECAB3-213ENST00000488489 PLB1Q6P1J6 1458 aa30.54■■■□□ 2.48
NECAB3-213ENST00000488489 EHBP1L1Q8N3D4 1523 aa30.51■■■□□ 2.48
NECAB3-213ENST00000488489 SHROOM2Q13796 1616 aa30.51■■■□□ 2.47
NECAB3-213ENST00000488489 NCOA2Q15596 1464 aa30.48■■■□□ 2.47
NECAB3-213ENST00000488489 CCER1Q8TC90 406 aaPredicted RBP30.47■■■□□ 2.47
NECAB3-213ENST00000488489 SUPT6HQ7KZ85 1726 aaKnown RBP30.45■■■□□ 2.47
NECAB3-213ENST00000488489 CLASP1Q7Z460 1538 aa30.43■■■□□ 2.46
NECAB3-213ENST00000488489 ZEB1P37275 1124 aaPredicted RBP30.43■■■□□ 2.46
NECAB3-213ENST00000488489 ARHGEF11O15085 1522 aa30.41■■■□□ 2.46
NECAB3-213ENST00000488489 ITGAEP38570 1179 aa30.41■■■□□ 2.46
NECAB3-213ENST00000488489 ABCA8O94911 1581 aa30.4■■■□□ 2.46
NECAB3-213ENST00000488489 FAM50AQ14320 339 aaKnown RBP30.4■■■□□ 2.46
NECAB3-213ENST00000488489 FGD6Q6ZV73 1430 aa30.39■■■□□ 2.46
NECAB3-213ENST00000488489 ERCC6L2Q5T890 1561 aa30.39■■■□□ 2.45
NECAB3-213ENST00000488489 PTPRGP23470 1445 aa30.39■■■□□ 2.45
NECAB3-213ENST00000488489 MYOM3Q5VTT5 1437 aa30.35■■■□□ 2.45
NECAB3-213ENST00000488489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.32■■■□□ 2.445e-7■■■■■ 29.7
NECAB3-213ENST00000488489 CDK11AQ9UQ88 783 aaPredicted RBP30.29■■■□□ 2.44
NECAB3-213ENST00000488489 ATP10BO94823 1461 aa30.26■■■□□ 2.43
NECAB3-213ENST00000488489 TROQ12816 1431 aaPredicted RBP30.23■■■□□ 2.43
NECAB3-213ENST00000488489 UACAQ9BZF9 1416 aa30.2■■■□□ 2.43
NECAB3-213ENST00000488489 PTPN23Q9H3S7 1636 aa30.2■■■□□ 2.42
NECAB3-213ENST00000488489 MIA2Q96PC5 1412 aa30.14■■■□□ 2.42
NECAB3-213ENST00000488489 TCOF1Q13428 1488 aaKnown RBP30.13■■■□□ 2.41
NECAB3-213ENST00000488489 PTPRKQ15262 1439 aa30.13■■■□□ 2.41
NECAB3-213ENST00000488489 KIF14Q15058 1648 aa30.13■■■□□ 2.41
NECAB3-213ENST00000488489 PLEKHD1A6NEE1 506 aa30.13■■■□□ 2.41
NECAB3-213ENST00000488489 ADCY10Q96PN6 1610 aa30.11■■■□□ 2.41
NECAB3-213ENST00000488489 OSCARQ8IYS5 282 aa30.11■■■□□ 2.41
NECAB3-213ENST00000488489 RAB3GAP2Q9H2M9 1393 aa30.1■■■□□ 2.41
NECAB3-213ENST00000488489 SETD5Q9C0A6 1442 aa30.1■■■□□ 2.41
NECAB3-213ENST00000488489 ABCC2Q92887 1545 aa30.09■■■□□ 2.41
NECAB3-213ENST00000488489 DHX57Q6P158 1386 aaKnown RBP30.08■■■□□ 2.41
NECAB3-213ENST00000488489 GPATCH8Q9UKJ3 1502 aaKnown RBP30.02■■■□□ 2.4
NECAB3-213ENST00000488489 ZNF644Q9H582 1327 aaPredicted RBP30.01■■■□□ 2.39
NECAB3-213ENST00000488489 ABCC10Q5T3U5 1492 aa29.99■■■□□ 2.39
NECAB3-213ENST00000488489 UHRF1BP1LA0JNW5 1464 aa29.98■■■□□ 2.39
NECAB3-213ENST00000488489 CFDP1Q9UEE9 299 aaPredicted RBP29.95■■■□□ 2.39
NECAB3-213ENST00000488489 ITSN2Q9NZM3 1697 aa29.95■■■□□ 2.39
NECAB3-213ENST00000488489 HFM1A2PYH4 1435 aa29.94■■■□□ 2.38
NECAB3-213ENST00000488489 CDC42BPAQ5VT25 1732 aa29.91■■■□□ 2.38
NECAB3-213ENST00000488489 CHIC2Q9UKJ5 165 aa29.9■■■□□ 2.38
NECAB3-213ENST00000488489 KDM5BQ9UGL1 1544 aa29.9■■■□□ 2.38
NECAB3-213ENST00000488489 CLSPNQ9HAW4 1339 aa29.9■■■□□ 2.38
NECAB3-213ENST00000488489 ZCCHC11Q5TAX3 1644 aaKnown RBP29.89■■■□□ 2.38
NECAB3-213ENST00000488489 NAIPQ13075 1403 aa29.89■■■□□ 2.38
NECAB3-213ENST00000488489 CAMSAP2Q08AD1 1489 aa29.88■■■□□ 2.37
NECAB3-213ENST00000488489 DAPK1P53355 1430 aa29.86■■■□□ 2.37
NECAB3-213ENST00000488489 ABCC5O15440 1437 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms