RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 AQRO60306 1485 aaKnown RBP eCLIP13.79□□□□□ -0.2
NUDCD3-209ENST00000487118 FBLN2P98095 1184 aa13.78□□□□□ -0.2
NUDCD3-209ENST00000487118 PBRM1Q86U86 1689 aa13.77□□□□□ -0.21
NUDCD3-209ENST00000487118 GRIN2BQ13224 1484 aa13.75□□□□□ -0.21
NUDCD3-209ENST00000487118 ADAMTS12P58397 1594 aa13.71□□□□□ -0.21
NUDCD3-209ENST00000487118 FHAD1B1AJZ9 1412 aa13.7□□□□□ -0.22
NUDCD3-209ENST00000487118 CLIP1P30622 1438 aa13.7□□□□□ -0.22
NUDCD3-209ENST00000487118 LMTK3Q96Q04 1460 aa13.67□□□□□ -0.22
NUDCD3-209ENST00000487118 MAGI1Q96QZ7 1491 aaPredicted RBP13.66□□□□□ -0.22
NUDCD3-209ENST00000487118 SNAPC4Q5SXM2 1469 aa13.65□□□□□ -0.22
NUDCD3-209ENST00000487118 CTTNBP2Q8WZ74 1663 aa13.65□□□□□ -0.22
NUDCD3-209ENST00000487118 KDM4FA0A1W2PPD8 638 aa13.63□□□□□ -0.23
NUDCD3-209ENST00000487118 ARHGAP35Q9NRY4 1499 aa13.61□□□□□ -0.23
NUDCD3-209ENST00000487118 FBXO41Q8TF61 875 aa13.6□□□□□ -0.23
NUDCD3-209ENST00000487118 VPS8Q8N3P4 1428 aa13.59□□□□□ -0.23
NUDCD3-209ENST00000487118 SYNJ2O15056 1496 aa13.59□□□□□ -0.23
NUDCD3-209ENST00000487118 CLASP1Q7Z460 1538 aa13.59□□□□□ -0.23
NUDCD3-209ENST00000487118 SOCS7O14512 581 aa13.58□□□□□ -0.24
NUDCD3-209ENST00000487118 GRIN2AQ12879 1464 aa13.58□□□□□ -0.24
NUDCD3-209ENST00000487118 EFCAB5A4FU69 1503 aa13.57□□□□□ -0.24
NUDCD3-209ENST00000487118 CHMP7Q8WUX9 453 aaPredicted RBP13.55□□□□□ -0.24
NUDCD3-209ENST00000487118 ILDR2Q71H61 639 aa13.54□□□□□ -0.24
NUDCD3-209ENST00000487118 IQGAP2Q13576 1575 aa13.53□□□□□ -0.24
NUDCD3-209ENST00000487118 SAMD9Q5K651 1589 aa13.53□□□□□ -0.24
NUDCD3-209ENST00000487118 RANGAP1P46060 587 aaPredicted RBP13.52□□□□□ -0.25
NUDCD3-209ENST00000487118 KIAA0586Q9BVV6 1533 aa13.52□□□□□ -0.25
NUDCD3-209ENST00000487118 NUP160Q12769 1436 aa13.51□□□□□ -0.25
NUDCD3-209ENST00000487118 CEP170Q5SW79 1584 aa13.49□□□□□ -0.25
NUDCD3-209ENST00000487118 UGGT2Q9NYU1 1516 aa13.49□□□□□ -0.25
NUDCD3-209ENST00000487118 ERCC6L2Q5T890 1561 aa13.48□□□□□ -0.25
NUDCD3-209ENST00000487118 FHOD3Q2V2M9 1422 aa13.45□□□□□ -0.26
NUDCD3-209ENST00000487118 DISP3Q9P2K9 1392 aa13.42□□□□□ -0.26
NUDCD3-209ENST00000487118 HECW2Q9P2P5 1572 aa13.41□□□□□ -0.26
NUDCD3-209ENST00000487118 FMN1Q68DA7 1419 aa13.41□□□□□ -0.26
NUDCD3-209ENST00000487118 MAP3K1Q13233 1512 aa13.41□□□□□ -0.26
NUDCD3-209ENST00000487118 TRIM26Q12899 539 aaPredicted RBP13.41□□□□□ -0.26
NUDCD3-209ENST00000487118 KIF13AQ9H1H9 1805 aa13.41□□□□□ -0.26
NUDCD3-209ENST00000487118 PCF11O94913 1555 aaKnown RBP13.41□□□□□ -0.26
NUDCD3-209ENST00000487118 DISP1Q96F81 1524 aa13.4□□□□□ -0.26
NUDCD3-209ENST00000487118 KIAA0556O60303 1618 aa13.4□□□□□ -0.26
NUDCD3-209ENST00000487118 FYCO1Q9BQS8 1478 aa13.4□□□□□ -0.26
NUDCD3-209ENST00000487118 CASKIN1Q8WXD9 1431 aa13.39□□□□□ -0.27
NUDCD3-209ENST00000487118 P3H3Q8IVL6 736 aa13.39□□□□□ -0.27
NUDCD3-209ENST00000487118 APLP2Q06481 763 aa13.37□□□□□ -0.27
NUDCD3-209ENST00000487118 CFAP43Q8NDM7 1665 aa13.35□□□□□ -0.27
NUDCD3-209ENST00000487118 PPARGC1BQ86YN6 1023 aaKnown RBP13.35□□□□□ -0.27
NUDCD3-209ENST00000487118 TIAM1Q13009 1591 aa13.35□□□□□ -0.27
NUDCD3-209ENST00000487118 JPH4Q96JJ6 628 aa13.34□□□□□ -0.27
NUDCD3-209ENST00000487118 SHROOM2Q13796 1616 aa13.34□□□□□ -0.27
NUDCD3-209ENST00000487118 CARMIL2Q6F5E8 1435 aa13.32□□□□□ -0.28
NUDCD3-209ENST00000487118 PCGF6Q9BYE7 350 aa13.32□□□□□ -0.28
NUDCD3-209ENST00000487118 HECW1Q76N89 1606 aa13.29□□□□□ -0.28
NUDCD3-209ENST00000487118 KANK4Q5T7N3 995 aaPredicted RBP13.29□□□□□ -0.28
NUDCD3-209ENST00000487118 LRRC9Q6ZRR7 1453 aa13.29□□□□□ -0.28
NUDCD3-209ENST00000487118 LRRIQ1Q96JM4 1722 aa13.27□□□□□ -0.28
NUDCD3-209ENST00000487118 PRG4Q92954 1404 aaPredicted RBP13.27□□□□□ -0.29
NUDCD3-209ENST00000487118 CCDC18Q5T9S5 1454 aa13.27□□□□□ -0.29
NUDCD3-209ENST00000487118 TSPOAP1O95153 1857 aa13.26□□□□□ -0.29
NUDCD3-209ENST00000487118 RAPGEF6Q8TEU7 1601 aa13.25□□□□□ -0.29
NUDCD3-209ENST00000487118 TTBK1Q5TCY1 1321 aaPredicted RBP13.24□□□□□ -0.29
NUDCD3-209ENST00000487118 EPRSP07814 1512 aaKnown RBP13.23□□□□□ -0.29
NUDCD3-209ENST00000487118 ABCA8O94911 1581 aa13.23□□□□□ -0.29
NUDCD3-209ENST00000487118 FAM69CQ0P6D2 419 aa13.22□□□□□ -0.29
NUDCD3-209ENST00000487118 ATP1B4Q9UN42 357 aaPredicted RBP13.22□□□□□ -0.29
NUDCD3-209ENST00000487118 ADGRL1O94910 1474 aa13.22□□□□□ -0.29
NUDCD3-209ENST00000487118 NUP153P49790 1475 aaKnown RBP13.22□□□□□ -0.29
NUDCD3-209ENST00000487118 KDM6BO15054 1643 aa13.21□□□□□ -0.3
NUDCD3-209ENST00000487118 EHBP1L1Q8N3D4 1523 aa13.2□□□□□ -0.3
NUDCD3-209ENST00000487118 PLB1Q6P1J6 1458 aa13.2□□□□□ -0.3
NUDCD3-209ENST00000487118 PTPRGP23470 1445 aa13.19□□□□□ -0.3
NUDCD3-209ENST00000487118 RRBP1Q9P2E9 1410 aaKnown RBP13.19□□□□□ -0.3
NUDCD3-209ENST00000487118 CDK13Q14004 1512 aaKnown RBP13.18□□□□□ -0.3
NUDCD3-209ENST00000487118 MAGI3Q5TCQ9 1506 aa13.18□□□□□ -0.3
NUDCD3-209ENST00000487118 MTUS2Q5JR59 1369 aa13.16□□□□□ -0.3
NUDCD3-209ENST00000487118 PHLDB1Q86UU1 1377 aa13.14□□□□□ -0.31
NUDCD3-209ENST00000487118 SUPT6HQ7KZ85 1726 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-209ENST00000487118 DIP2BQ9P265 1576 aa13.13□□□□□ -0.31
NUDCD3-209ENST00000487118 ADCY10Q96PN6 1610 aa13.13□□□□□ -0.31
NUDCD3-209ENST00000487118 UACAQ9BZF9 1416 aa13.13□□□□□ -0.31
NUDCD3-209ENST00000487118 NCOA2Q15596 1464 aa13.12□□□□□ -0.31
NUDCD3-209ENST00000487118 ABCC10Q5T3U5 1492 aa13.12□□□□□ -0.31
NUDCD3-209ENST00000487118 ATP10BO94823 1461 aa13.11□□□□□ -0.31
NUDCD3-209ENST00000487118 CCNB3Q8WWL7 1395 aa13.11□□□□□ -0.31
NUDCD3-209ENST00000487118 ABCC2Q92887 1545 aa13.11□□□□□ -0.31
NUDCD3-209ENST00000487118 UHRF1BP1LA0JNW5 1464 aa13.1□□□□□ -0.31
NUDCD3-209ENST00000487118 NPM1P06748 294 aaKnown RBP eCLIP13.09□□□□□ -0.31
NUDCD3-209ENST00000487118 TROQ12816 1431 aaPredicted RBP13.09□□□□□ -0.31
NUDCD3-209ENST00000487118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.08□□□□□ -0.31
NUDCD3-209ENST00000487118 CDK11AQ9UQ88 783 aaPredicted RBP13.08□□□□□ -0.32
NUDCD3-209ENST00000487118 MYOM3Q5VTT5 1437 aa13.07□□□□□ -0.32
NUDCD3-209ENST00000487118 FGD6Q6ZV73 1430 aa13.06□□□□□ -0.32
NUDCD3-209ENST00000487118 ARID3CA6NKF2 412 aa13.06□□□□□ -0.32
NUDCD3-209ENST00000487118 MAPKBP1O60336 1514 aa13.06□□□□□ -0.32
NUDCD3-209ENST00000487118 KDM5BQ9UGL1 1544 aa13.03□□□□□ -0.32
NUDCD3-209ENST00000487118 MIA2Q96PC5 1412 aa13.03□□□□□ -0.32
NUDCD3-209ENST00000487118 SPATA31D1Q6ZQQ2 1576 aa13.03□□□□□ -0.32
NUDCD3-209ENST00000487118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
NUDCD3-209ENST00000487118 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
NUDCD3-209ENST00000487118 TCOF1Q13428 1488 aaKnown RBP13.02□□□□□ -0.33
NUDCD3-209ENST00000487118 PPRC1Q5VV67 1664 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms