RNA–Protein interactions for RNA: ENST00000486308.1

APH1A-207, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1A, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-207ENST00000486308 PRXQ9BXM0 1461 aa12.51□□□□□ -0.41
APH1A-207ENST00000486308 EEA1Q15075 1411 aa12.5□□□□□ -0.41
APH1A-207ENST00000486308 ARAP1Q96P48 1450 aa12.5□□□□□ -0.41
APH1A-207ENST00000486308 KIAA0586Q9BVV6 1533 aa12.5□□□□□ -0.41
APH1A-207ENST00000486308 ERCC6L2Q5T890 1561 aa12.47□□□□□ -0.41
APH1A-207ENST00000486308 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
APH1A-207ENST00000486308 JPH4Q96JJ6 628 aa12.46□□□□□ -0.41
APH1A-207ENST00000486308 PRG4Q92954 1404 aaPredicted RBP12.45□□□□□ -0.42
APH1A-207ENST00000486308 CYB5RLQ6IPT4 315 aa12.44□□□□□ -0.42
APH1A-207ENST00000486308 IQGAP2Q13576 1575 aa12.43□□□□□ -0.42
APH1A-207ENST00000486308 FAM9AQ8IZU1 332 aaPredicted RBP12.42□□□□□ -0.42
APH1A-207ENST00000486308 CTTNBP2Q8WZ74 1663 aa12.38□□□□□ -0.43
APH1A-207ENST00000486308 KIF21BO75037 1637 aa12.38□□□□□ -0.43
APH1A-207ENST00000486308 UGGT2Q9NYU1 1516 aa12.37□□□□□ -0.43
APH1A-207ENST00000486308 DISP1Q96F81 1524 aa12.36□□□□□ -0.43
APH1A-207ENST00000486308 CARMIL2Q6F5E8 1435 aa12.35□□□□□ -0.43
APH1A-207ENST00000486308 KIAA0556O60303 1618 aa12.32□□□□□ -0.44
APH1A-207ENST00000486308 TNIKQ9UKE5 1360 aa12.31□□□□□ -0.44
APH1A-207ENST00000486308 GOLGA3Q08378 1498 aa12.3□□□□□ -0.44
APH1A-207ENST00000486308 PTPRGP23470 1445 aa12.29□□□□□ -0.44
APH1A-207ENST00000486308 SAMD9Q5K651 1589 aa12.26□□□□□ -0.45
APH1A-207ENST00000486308 ADCY10Q96PN6 1610 aa12.26□□□□□ -0.45
APH1A-207ENST00000486308 EHMT2Q96KQ7 1210 aa12.25□□□□□ -0.45
APH1A-207ENST00000486308 TTBK1Q5TCY1 1321 aaPredicted RBP12.25□□□□□ -0.45
APH1A-207ENST00000486308 UBTFP17480 764 aaKnown RBP12.23□□□□□ -0.45
APH1A-207ENST00000486308 UHRF1BP1LA0JNW5 1464 aa12.22□□□□□ -0.45
APH1A-207ENST00000486308 UACAQ9BZF9 1416 aa12.22□□□□□ -0.45
APH1A-207ENST00000486308 EFCAB5A4FU69 1503 aa12.21□□□□□ -0.46
APH1A-207ENST00000486308 ABCC2Q92887 1545 aa12.21□□□□□ -0.46
APH1A-207ENST00000486308 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
APH1A-207ENST00000486308 PLB1Q6P1J6 1458 aa12.2□□□□□ -0.46
APH1A-207ENST00000486308 RANGAP1P46060 587 aaPredicted RBP12.19□□□□□ -0.46
APH1A-207ENST00000486308 ABCA8O94911 1581 aa12.18□□□□□ -0.46
APH1A-207ENST00000486308 MAPKBP1O60336 1514 aa12.18□□□□□ -0.46
APH1A-207ENST00000486308 FHOD3Q2V2M9 1422 aa12.18□□□□□ -0.46
APH1A-207ENST00000486308 KDM5BQ9UGL1 1544 aa12.16□□□□□ -0.46
APH1A-207ENST00000486308 NPM1P06748 294 aaKnown RBP eCLIP12.16□□□□□ -0.46
APH1A-207ENST00000486308 ARHGAP35Q9NRY4 1499 aa12.15□□□□□ -0.46
APH1A-207ENST00000486308 TRHP20396 242 aaPredicted RBP12.15□□□□□ -0.46
APH1A-207ENST00000486308 ZCCHC11Q5TAX3 1644 aaKnown RBP12.13□□□□□ -0.47
APH1A-207ENST00000486308 ABCC10Q5T3U5 1492 aa12.12□□□□□ -0.47
APH1A-207ENST00000486308 ASXL2Q76L83 1435 aa12.11□□□□□ -0.47
APH1A-207ENST00000486308 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
APH1A-207ENST00000486308 DIP2BQ9P265 1576 aa12.1□□□□□ -0.47
APH1A-207ENST00000486308 KIF13AQ9H1H9 1805 aa12.09□□□□□ -0.47
APH1A-207ENST00000486308 NUP153P49790 1475 aaKnown RBP12.09□□□□□ -0.47
APH1A-207ENST00000486308 CLIP1P30622 1438 aa12.08□□□□□ -0.48
APH1A-207ENST00000486308 ATP10BO94823 1461 aa12.08□□□□□ -0.48
APH1A-207ENST00000486308 FMN1Q68DA7 1419 aa12.07□□□□□ -0.48
APH1A-207ENST00000486308 LOC105371045A0A1W2PR82 267 aa12.06□□□□□ -0.48
APH1A-207ENST00000486308 FAM69CQ0P6D2 419 aa12.06□□□□□ -0.48
APH1A-207ENST00000486308 WDR7Q9Y4E6 1490 aa12.06□□□□□ -0.48
APH1A-207ENST00000486308 ARID3CA6NKF2 412 aa12.05□□□□□ -0.48
APH1A-207ENST00000486308 EPRSP07814 1512 aaKnown RBP12.05□□□□□ -0.48
APH1A-207ENST00000486308 CEP162Q5TB80 1403 aa12.04□□□□□ -0.48
APH1A-207ENST00000486308 GLI2P10070 1586 aa12.04□□□□□ -0.48
APH1A-207ENST00000486308 HECW1Q76N89 1606 aa12.02□□□□□ -0.49
APH1A-207ENST00000486308 CDK13Q14004 1512 aaKnown RBP12.01□□□□□ -0.49
APH1A-207ENST00000486308 PCF11O94913 1555 aaKnown RBP12.01□□□□□ -0.49
APH1A-207ENST00000486308 CASKIN1Q8WXD9 1431 aa12□□□□□ -0.49
APH1A-207ENST00000486308 MAP3K4Q9Y6R4 1608 aa11.98□□□□□ -0.49
APH1A-207ENST00000486308 FYCO1Q9BQS8 1478 aa11.98□□□□□ -0.49
APH1A-207ENST00000486308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.98□□□□□ -0.49
APH1A-207ENST00000486308 HNRNPUL2Q1KMD3 747 aaKnown RBP11.98□□□□□ -0.49
APH1A-207ENST00000486308 KCNH8Q96L42 1107 aa11.97□□□□□ -0.49
APH1A-207ENST00000486308 ATP1B4Q9UN42 357 aaPredicted RBP11.97□□□□□ -0.49
APH1A-207ENST00000486308 PPRC1Q5VV67 1664 aaKnown RBP11.97□□□□□ -0.49
APH1A-207ENST00000486308 LRRIQ1Q96JM4 1722 aa11.96□□□□□ -0.49
APH1A-207ENST00000486308 TSPOAP1O95153 1857 aa11.95□□□□□ -0.5
APH1A-207ENST00000486308 CFAP43Q8NDM7 1665 aa11.94□□□□□ -0.5
APH1A-207ENST00000486308 ABCA9Q8IUA7 1624 aa11.94□□□□□ -0.5
APH1A-207ENST00000486308 PLEKHD1A6NEE1 506 aa11.94□□□□□ -0.5
APH1A-207ENST00000486308 CCDC18Q5T9S5 1454 aa11.94□□□□□ -0.5
APH1A-207ENST00000486308 CD109Q6YHK3 1445 aa11.94□□□□□ -0.5
APH1A-207ENST00000486308 MAGI3Q5TCQ9 1506 aa11.92□□□□□ -0.5
APH1A-207ENST00000486308 TEX14Q8IWB6 1497 aa11.91□□□□□ -0.5
APH1A-207ENST00000486308 TROQ12816 1431 aaPredicted RBP11.9□□□□□ -0.5
APH1A-207ENST00000486308 CDK11AQ9UQ88 783 aaPredicted RBP11.9□□□□□ -0.5
APH1A-207ENST00000486308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.9□□□□□ -0.5
APH1A-207ENST00000486308 TTC37Q6PGP7 1564 aa11.89□□□□□ -0.51
APH1A-207ENST00000486308 VPS8Q8N3P4 1428 aa11.89□□□□□ -0.51
APH1A-207ENST00000486308 KDM6BO15054 1643 aa11.87□□□□□ -0.51
APH1A-207ENST00000486308 KIF14Q15058 1648 aa11.87□□□□□ -0.51
APH1A-207ENST00000486308 COL17A1Q9UMD9 1497 aaPredicted RBP11.86□□□□□ -0.51
APH1A-207ENST00000486308 NEO1Q92859 1461 aa11.83□□□□□ -0.52
APH1A-207ENST00000486308 PLCH2O75038 1416 aa11.83□□□□□ -0.52
APH1A-207ENST00000486308 FANCAO15360 1455 aa11.82□□□□□ -0.52
APH1A-207ENST00000486308 ARAP3Q8WWN8 1544 aa11.81□□□□□ -0.52
APH1A-207ENST00000486308 PHLDB1Q86UU1 1377 aa11.81□□□□□ -0.52
APH1A-207ENST00000486308 TIAM1Q13009 1591 aa11.81□□□□□ -0.52
APH1A-207ENST00000486308 EHBP1L1Q8N3D4 1523 aa11.81□□□□□ -0.52
APH1A-207ENST00000486308 MTUS2Q5JR59 1369 aa11.8□□□□□ -0.52
APH1A-207ENST00000486308 MYO5CQ9NQX4 1742 aa11.8□□□□□ -0.52
APH1A-207ENST00000486308 CFAP74Q9C0B2 1584 aa11.79□□□□□ -0.52
APH1A-207ENST00000486308 MAP3K1Q13233 1512 aa11.79□□□□□ -0.52
APH1A-207ENST00000486308 AKNAQ7Z591 1439 aa11.78□□□□□ -0.52
APH1A-207ENST00000486308 PREX2Q70Z35 1606 aa11.78□□□□□ -0.52
APH1A-207ENST00000486308 LRRC9Q6ZRR7 1453 aa11.76□□□□□ -0.53
APH1A-207ENST00000486308 ARHGAP5Q13017 1502 aa11.76□□□□□ -0.53
APH1A-207ENST00000486308 FRMPD1Q5SYB0 1578 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms