RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 SNAPC4Q5SXM2 1469 aa28.47■■■□□ 2.15
NECTIN3-206ENST00000485303 FHAD1B1AJZ9 1412 aa28.47■■■□□ 2.15
NECTIN3-206ENST00000485303 CUL7Q14999 1698 aa28.47■■■□□ 2.15
NECTIN3-206ENST00000485303 WDR97A6NE52 1622 aa28.47■■■□□ 2.15
NECTIN3-206ENST00000485303 ARAP1Q96P48 1450 aa28.47■■■□□ 2.15
NECTIN3-206ENST00000485303 ARHGAP35Q9NRY4 1499 aa28.45■■■□□ 2.14
NECTIN3-206ENST00000485303 FHOD3Q2V2M9 1422 aa28.44■■■□□ 2.14
NECTIN3-206ENST00000485303 EIF4G3O43432 1585 aaKnown RBP28.37■■■□□ 2.13
NECTIN3-206ENST00000485303 HNRNPUL2Q1KMD3 747 aaKnown RBP28.36■■■□□ 2.13
NECTIN3-206ENST00000485303 PBRM1Q86U86 1689 aa28.34■■■□□ 2.13
NECTIN3-206ENST00000485303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.33■■■□□ 2.13
NECTIN3-206ENST00000485303 KANK4Q5T7N3 995 aaPredicted RBP28.33■■■□□ 2.13
NECTIN3-206ENST00000485303 ITGAEP38570 1179 aa28.28■■■□□ 2.12
NECTIN3-206ENST00000485303 ADAMTS12P58397 1594 aa28.26■■■□□ 2.11
NECTIN3-206ENST00000485303 GRIN2AQ12879 1464 aa28.2■■■□□ 2.1
NECTIN3-206ENST00000485303 MAGI1Q96QZ7 1491 aaPredicted RBP28.18■■■□□ 2.1
NECTIN3-206ENST00000485303 SYNJ2O15056 1496 aa28.16■■■□□ 2.1
NECTIN3-206ENST00000485303 CTTNBP2Q8WZ74 1663 aa28.15■■■□□ 2.1
NECTIN3-206ENST00000485303 JPH4Q96JJ6 628 aa28.15■■■□□ 2.1
NECTIN3-206ENST00000485303 FMN1Q68DA7 1419 aa28.1■■■□□ 2.09
NECTIN3-206ENST00000485303 IQGAP2Q13576 1575 aa28.1■■■□□ 2.09
NECTIN3-206ENST00000485303 CCER1Q8TC90 406 aaPredicted RBP28.09■■■□□ 2.09
NECTIN3-206ENST00000485303 FAM50AQ14320 339 aaKnown RBP28.08■■■□□ 2.09
NECTIN3-206ENST00000485303 EFCAB5A4FU69 1503 aa28.06■■■□□ 2.08
NECTIN3-206ENST00000485303 HRCP23327 699 aa28.06■■■□□ 2.08
NECTIN3-206ENST00000485303 KIAA0586Q9BVV6 1533 aa28.05■■■□□ 2.08
NECTIN3-206ENST00000485303 MTUS2Q5JR59 1369 aa28.03■■■□□ 2.08
NECTIN3-206ENST00000485303 PCF11O94913 1555 aaKnown RBP27.99■■■□□ 2.07
NECTIN3-206ENST00000485303 CARMIL2Q6F5E8 1435 aa27.94■■■□□ 2.06
NECTIN3-206ENST00000485303 CASKIN1Q8WXD9 1431 aa27.93■■■□□ 2.06
NECTIN3-206ENST00000485303 CEP170Q5SW79 1584 aa27.91■■■□□ 2.06
NECTIN3-206ENST00000485303 FYCO1Q9BQS8 1478 aa27.87■■■□□ 2.05
NECTIN3-206ENST00000485303 TIAM1Q13009 1591 aa27.85■■■□□ 2.05
NECTIN3-206ENST00000485303 LRRC9Q6ZRR7 1453 aa27.84■■■□□ 2.05
NECTIN3-206ENST00000485303 PRG4Q92954 1404 aaPredicted RBP27.84■■■□□ 2.05
NECTIN3-206ENST00000485303 NUP160Q12769 1436 aa27.83■■■□□ 2.05
NECTIN3-206ENST00000485303 SAMD9Q5K651 1589 aa27.83■■■□□ 2.05
NECTIN3-206ENST00000485303 CDK11AQ9UQ88 783 aaPredicted RBP27.81■■■□□ 2.04
NECTIN3-206ENST00000485303 UGGT2Q9NYU1 1516 aa27.8■■■□□ 2.04
NECTIN3-206ENST00000485303 CCNB3Q8WWL7 1395 aa27.78■■■□□ 2.04
NECTIN3-206ENST00000485303 DISP1Q96F81 1524 aa27.78■■■□□ 2.04
NECTIN3-206ENST00000485303 PHLDB1Q86UU1 1377 aa27.75■■■□□ 2.03
NECTIN3-206ENST00000485303 PTPRGP23470 1445 aa27.74■■■□□ 2.03
NECTIN3-206ENST00000485303 CHD1O14646 1710 aa27.73■■■□□ 2.03
NECTIN3-206ENST00000485303 KIAA0556O60303 1618 aa27.73■■■□□ 2.03
NECTIN3-206ENST00000485303 CDK13Q14004 1512 aaKnown RBP27.73■■■□□ 2.03
NECTIN3-206ENST00000485303 PLB1Q6P1J6 1458 aa27.72■■■□□ 2.03
NECTIN3-206ENST00000485303 ZNF777Q9ULD5 760 aaPredicted RBP27.69■■■□□ 2.02
NECTIN3-206ENST00000485303 ZEB1P37275 1124 aaPredicted RBP27.66■■■□□ 2.02
NECTIN3-206ENST00000485303 PLEKHD1A6NEE1 506 aa27.66■■■□□ 2.02
NECTIN3-206ENST00000485303 OSCARQ8IYS5 282 aa27.65■■■□□ 2.02
NECTIN3-206ENST00000485303 EPRSP07814 1512 aaKnown RBP27.65■■■□□ 2.02
NECTIN3-206ENST00000485303 HECW1Q76N89 1606 aa27.63■■■□□ 2.01
NECTIN3-206ENST00000485303 CHIC2Q9UKJ5 165 aa27.61■■■□□ 2.01
NECTIN3-206ENST00000485303 MAP3K1Q13233 1512 aa27.61■■■□□ 2.01
NECTIN3-206ENST00000485303 CCDC18Q5T9S5 1454 aa27.6■■■□□ 2.01
NECTIN3-206ENST00000485303 KCNH8Q96L42 1107 aa27.6■■■□□ 2.01
NECTIN3-206ENST00000485303 NCOA2Q15596 1464 aa27.56■■■□□ 2
NECTIN3-206ENST00000485303 CFAP43Q8NDM7 1665 aa27.55■■■□□ 2
NECTIN3-206ENST00000485303 RRBP1Q9P2E9 1410 aaKnown RBP27.54■■■□□ 2
NECTIN3-206ENST00000485303 NUP153P49790 1475 aaKnown RBP27.54■■■□□ 2
NECTIN3-206ENST00000485303 RAPGEF6Q8TEU7 1601 aa27.51■■□□□ 1.99
NECTIN3-206ENST00000485303 CFDP1Q9UEE9 299 aaPredicted RBP27.48■■□□□ 1.99
NECTIN3-206ENST00000485303 EHBP1L1Q8N3D4 1523 aa27.47■■□□□ 1.99
NECTIN3-206ENST00000485303 FGD6Q6ZV73 1430 aa27.47■■□□□ 1.99
NECTIN3-206ENST00000485303 ERCC6L2Q5T890 1561 aa27.46■■□□□ 1.99
NECTIN3-206ENST00000485303 RRP7BPQ9NSQ0 103 aa27.45■■□□□ 1.98
NECTIN3-206ENST00000485303 MAGI3Q5TCQ9 1506 aa27.44■■□□□ 1.98
NECTIN3-206ENST00000485303 MYOM3Q5VTT5 1437 aa27.43■■□□□ 1.98
NECTIN3-206ENST00000485303 ZNF644Q9H582 1327 aaPredicted RBP27.41■■□□□ 1.98
NECTIN3-206ENST00000485303 LRRIQ1Q96JM4 1722 aa27.41■■□□□ 1.98
NECTIN3-206ENST00000485303 UACAQ9BZF9 1416 aa27.4■■□□□ 1.98
NECTIN3-206ENST00000485303 SUPT6HQ7KZ85 1726 aaKnown RBP27.39■■□□□ 1.98
NECTIN3-206ENST00000485303 NPM1P06748 294 aaKnown RBP eCLIP27.36■■□□□ 1.97
NECTIN3-206ENST00000485303 TROQ12816 1431 aaPredicted RBP27.35■■□□□ 1.97
NECTIN3-206ENST00000485303 ATP10BO94823 1461 aa27.35■■□□□ 1.97
NECTIN3-206ENST00000485303 TRIM52Q96A61 297 aa27.34■■□□□ 1.97
NECTIN3-206ENST00000485303 RAB3GAP2Q9H2M9 1393 aa27.32■■□□□ 1.96
NECTIN3-206ENST00000485303 SETD5Q9C0A6 1442 aa27.27■■□□□ 1.96
NECTIN3-206ENST00000485303 CYB5RLQ6IPT4 315 aa27.25■■□□□ 1.95
NECTIN3-206ENST00000485303 CLASP1Q7Z460 1538 aa27.25■■□□□ 1.95
NECTIN3-206ENST00000485303 ABCA8O94911 1581 aa27.25■■□□□ 1.95
NECTIN3-206ENST00000485303 NEUROD1Q13562 356 aa27.25■■□□□ 1.95
NECTIN3-206ENST00000485303 MYT1LQ9UL68 1186 aa27.23■■□□□ 1.95
NECTIN3-206ENST00000485303 ARHGEF11O15085 1522 aa27.19■■□□□ 1.94
NECTIN3-206ENST00000485303 HNRNPMP52272 730 aaKnown RBP eCLIP27.19■■□□□ 1.94
NECTIN3-206ENST00000485303 PTPN23Q9H3S7 1636 aa27.18■■□□□ 1.94
NECTIN3-206ENST00000485303 SHROOM2Q13796 1616 aa27.17■■□□□ 1.94
NECTIN3-206ENST00000485303 TSPY4P0CV99 314 aa27.15■■□□□ 1.94
NECTIN3-206ENST00000485303 TSPY10P0CW01 314 aa27.15■■□□□ 1.94
NECTIN3-206ENST00000485303 DHX57Q6P158 1386 aaKnown RBP27.15■■□□□ 1.94
NECTIN3-206ENST00000485303 KIF14Q15058 1648 aa27.15■■□□□ 1.94
NECTIN3-206ENST00000485303 PTPRKQ15262 1439 aa27.14■■□□□ 1.94
NECTIN3-206ENST00000485303 ABCC2Q92887 1545 aa27.13■■□□□ 1.93
NECTIN3-206ENST00000485303 MIA2Q96PC5 1412 aa27.12■■□□□ 1.93
NECTIN3-206ENST00000485303 GPATCH8Q9UKJ3 1502 aaKnown RBP27.09■■□□□ 1.93
NECTIN3-206ENST00000485303 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.09■■□□□ 1.93
NECTIN3-206ENST00000485303 SIN3AQ96ST3 1273 aa27.05■■□□□ 1.92
NECTIN3-206ENST00000485303 CAMSAP2Q08AD1 1489 aa27.01■■□□□ 1.91
NECTIN3-206ENST00000485303 EFCAB2Q5VUJ9 269 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms