RNA–Protein interactions for RNA: ENST00000484809.1

SNX5-212, Transcript of sorting nexin 5, humanhuman

TSL 2

Gene SNX5, Length 1,321 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-212ENST00000484809 SHROOM2Q13796 1616 aa23.65■■□□□ 1.38
SNX5-212ENST00000484809 ERCC6L2Q5T890 1561 aa23.59■■□□□ 1.37
SNX5-212ENST00000484809 RUSC2Q8N2Y8 1516 aa23.58■■□□□ 1.37
SNX5-212ENST00000484809 CARMIL1Q5VZK9 1371 aa23.56■■□□□ 1.36
SNX5-212ENST00000484809 FOXD1Q16676 465 aa23.55■■□□□ 1.36
SNX5-212ENST00000484809 JPH4Q96JJ6 628 aa23.51■■□□□ 1.35
SNX5-212ENST00000484809 KIAA0586Q9BVV6 1533 aa23.49■■□□□ 1.35
SNX5-212ENST00000484809 PRG4Q92954 1404 aaPredicted RBP23.48■■□□□ 1.35
SNX5-212ENST00000484809 RAPGEF2Q9Y4G8 1499 aa23.4■■□□□ 1.34
SNX5-212ENST00000484809 IQGAP2Q13576 1575 aa23.34■■□□□ 1.33
SNX5-212ENST00000484809 PLPPR3Q6T4P5 718 aa23.33■■□□□ 1.33
SNX5-212ENST00000484809 TRHP20396 242 aaPredicted RBP23.3■■□□□ 1.32
SNX5-212ENST00000484809 PRXQ9BXM0 1461 aa23.27■■□□□ 1.32
SNX5-212ENST00000484809 CTTNBP2Q8WZ74 1663 aa23.26■■□□□ 1.31
SNX5-212ENST00000484809 CARMIL2Q6F5E8 1435 aa23.22■■□□□ 1.31
SNX5-212ENST00000484809 UGGT2Q9NYU1 1516 aa23.21■■□□□ 1.31
SNX5-212ENST00000484809 ADCY10Q96PN6 1610 aa23.19■■□□□ 1.3
SNX5-212ENST00000484809 DISP1Q96F81 1524 aa23.19■■□□□ 1.3
SNX5-212ENST00000484809 EEA1Q15075 1411 aa23.19■■□□□ 1.3
SNX5-212ENST00000484809 CSRNP3Q8WYN3 585 aa23.18■■□□□ 1.3
SNX5-212ENST00000484809 TNIKQ9UKE5 1360 aa23.17■■□□□ 1.3
SNX5-212ENST00000484809 PTPRGP23470 1445 aa23.17■■□□□ 1.3
SNX5-212ENST00000484809 KIAA0556O60303 1618 aa23.12■■□□□ 1.29
SNX5-212ENST00000484809 KIF13AQ9H1H9 1805 aa23.09■■□□□ 1.29
SNX5-212ENST00000484809 NPM1P06748 294 aaKnown RBP eCLIP23.08■■□□□ 1.29
SNX5-212ENST00000484809 TTBK1Q5TCY1 1321 aaPredicted RBP23.08■■□□□ 1.29
SNX5-212ENST00000484809 MAPKBP1O60336 1514 aa23.07■■□□□ 1.28
SNX5-212ENST00000484809 FAM9AQ8IZU1 332 aaPredicted RBP23.04■■□□□ 1.28
SNX5-212ENST00000484809 GOLGA3Q08378 1498 aa23.03■■□□□ 1.28
SNX5-212ENST00000484809 UHRF1BP1LA0JNW5 1464 aa23.02■■□□□ 1.28
SNX5-212ENST00000484809 UACAQ9BZF9 1416 aa23.01■■□□□ 1.27
SNX5-212ENST00000484809 ABCC2Q92887 1545 aa23■■□□□ 1.27
SNX5-212ENST00000484809 KIF21BO75037 1637 aa22.99■■□□□ 1.27
SNX5-212ENST00000484809 ABCC10Q5T3U5 1492 aa22.98■■□□□ 1.27
SNX5-212ENST00000484809 DIP2BQ9P265 1576 aa22.96■■□□□ 1.27
SNX5-212ENST00000484809 KDM5BQ9UGL1 1544 aa22.91■■□□□ 1.26
SNX5-212ENST00000484809 FAM69CQ0P6D2 419 aa22.91■■□□□ 1.26
SNX5-212ENST00000484809 SAMD9Q5K651 1589 aa22.91■■□□□ 1.26
SNX5-212ENST00000484809 ABCA8O94911 1581 aa22.89■■□□□ 1.26
SNX5-212ENST00000484809 ZCCHC11Q5TAX3 1644 aaKnown RBP22.89■■□□□ 1.26
SNX5-212ENST00000484809 PLB1Q6P1J6 1458 aa22.89■■□□□ 1.25
SNX5-212ENST00000484809 ASXL2Q76L83 1435 aa22.87■■□□□ 1.25
SNX5-212ENST00000484809 P3H3Q8IVL6 736 aa22.84■■□□□ 1.25
SNX5-212ENST00000484809 TSPOAP1O95153 1857 aa22.83■■□□□ 1.25
SNX5-212ENST00000484809 GLI2P10070 1586 aa22.79■■□□□ 1.24
SNX5-212ENST00000484809 RANGAP1P46060 587 aaPredicted RBP22.76■■□□□ 1.23
SNX5-212ENST00000484809 EFCAB5A4FU69 1503 aa22.74■■□□□ 1.23
SNX5-212ENST00000484809 EPRSP07814 1512 aaKnown RBP22.74■■□□□ 1.23
SNX5-212ENST00000484809 UBTFP17480 764 aaKnown RBP22.74■■□□□ 1.23
SNX5-212ENST00000484809 EHMT2Q96KQ7 1210 aa22.74■■□□□ 1.23
SNX5-212ENST00000484809 RAPGEF6Q8TEU7 1601 aa22.73■■□□□ 1.23
SNX5-212ENST00000484809 WDR7Q9Y4E6 1490 aa22.72■■□□□ 1.23
SNX5-212ENST00000484809 FHOD3Q2V2M9 1422 aa22.72■■□□□ 1.23
SNX5-212ENST00000484809 PPRC1Q5VV67 1664 aaKnown RBP22.71■■□□□ 1.23
SNX5-212ENST00000484809 MAP3K4Q9Y6R4 1608 aa22.7■■□□□ 1.22
SNX5-212ENST00000484809 ATP10BO94823 1461 aa22.68■■□□□ 1.22
SNX5-212ENST00000484809 KDM6BO15054 1643 aa22.64■■□□□ 1.21
SNX5-212ENST00000484809 NUP153P49790 1475 aaKnown RBP22.62■■□□□ 1.21
SNX5-212ENST00000484809 ARID3CA6NKF2 412 aa22.62■■□□□ 1.21
SNX5-212ENST00000484809 CFAP43Q8NDM7 1665 aa22.61■■□□□ 1.21
SNX5-212ENST00000484809 ARHGAP35Q9NRY4 1499 aa22.61■■□□□ 1.21
SNX5-212ENST00000484809 KCNH8Q96L42 1107 aa22.58■■□□□ 1.21
SNX5-212ENST00000484809 TEX14Q8IWB6 1497 aa22.56■■□□□ 1.2
SNX5-212ENST00000484809 CD109Q6YHK3 1445 aa22.53■■□□□ 1.2
SNX5-212ENST00000484809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.53■■□□□ 1.2
SNX5-212ENST00000484809 HNRNPUL2Q1KMD3 747 aaKnown RBP22.53■■□□□ 1.2
SNX5-212ENST00000484809 FMN1Q68DA7 1419 aa22.52■■□□□ 1.2
SNX5-212ENST00000484809 MAGI3Q5TCQ9 1506 aa22.52■■□□□ 1.2
SNX5-212ENST00000484809 ABCA9Q8IUA7 1624 aa22.51■■□□□ 1.19
SNX5-212ENST00000484809 PPP6R1Q9UPN7 881 aa22.48■■□□□ 1.19
SNX5-212ENST00000484809 ADRA2BP18089 450 aa22.47■■□□□ 1.19
SNX5-212ENST00000484809 COL17A1Q9UMD9 1497 aaPredicted RBP22.47■■□□□ 1.19
SNX5-212ENST00000484809 HECW1Q76N89 1606 aa22.46■■□□□ 1.19
SNX5-212ENST00000484809 CDK13Q14004 1512 aaKnown RBP22.45■■□□□ 1.18
SNX5-212ENST00000484809 PLEKHD1A6NEE1 506 aa22.44■■□□□ 1.18
SNX5-212ENST00000484809 LRRIQ1Q96JM4 1722 aa22.41■■□□□ 1.18
SNX5-212ENST00000484809 ATP1B4Q9UN42 357 aaPredicted RBP22.39■■□□□ 1.18
SNX5-212ENST00000484809 CLIP1P30622 1438 aa22.39■■□□□ 1.17
SNX5-212ENST00000484809 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.35■■□□□ 1.17
SNX5-212ENST00000484809 PCF11O94913 1555 aaKnown RBP22.35■■□□□ 1.17
SNX5-212ENST00000484809 CASKIN1Q8WXD9 1431 aa22.33■■□□□ 1.17
SNX5-212ENST00000484809 ARAP3Q8WWN8 1544 aa22.33■■□□□ 1.17
SNX5-212ENST00000484809 PHLDB1Q86UU1 1377 aa22.32■■□□□ 1.16
SNX5-212ENST00000484809 TTC37Q6PGP7 1564 aa22.32■■□□□ 1.16
SNX5-212ENST00000484809 NEO1Q92859 1461 aa22.31■■□□□ 1.16
SNX5-212ENST00000484809 CDK11AQ9UQ88 783 aaPredicted RBP22.3■■□□□ 1.16
SNX5-212ENST00000484809 FYCO1Q9BQS8 1478 aa22.28■■□□□ 1.16
SNX5-212ENST00000484809 CCDC18Q5T9S5 1454 aa22.27■■□□□ 1.16
SNX5-212ENST00000484809 TROQ12816 1431 aaPredicted RBP22.26■■□□□ 1.15
SNX5-212ENST00000484809 CFAP74Q9C0B2 1584 aa22.25■■□□□ 1.15
SNX5-212ENST00000484809 KIF14Q15058 1648 aa22.24■■□□□ 1.15
SNX5-212ENST00000484809 MYO5CQ9NQX4 1742 aa22.23■■□□□ 1.15
SNX5-212ENST00000484809 CEP162Q5TB80 1403 aa22.23■■□□□ 1.15
SNX5-212ENST00000484809 FANCAO15360 1455 aa22.23■■□□□ 1.15
SNX5-212ENST00000484809 PLCH2O75038 1416 aa22.2■■□□□ 1.15
SNX5-212ENST00000484809 LOC105371045A0A1W2PR82 267 aa22.2■■□□□ 1.14
SNX5-212ENST00000484809 AKNAQ7Z591 1439 aa22.2■■□□□ 1.14
SNX5-212ENST00000484809 KDM4FA0A1W2PPD8 638 aa22.19■■□□□ 1.14
SNX5-212ENST00000484809 FRMPD1Q5SYB0 1578 aa22.19■■□□□ 1.14
SNX5-212ENST00000484809 RICTORQ6R327 1708 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms