RNA–Protein interactions for RNA: ENST00000484809.1

SNX5-212, Transcript of sorting nexin 5, humanhuman

TSL 2

Gene SNX5, Length 1,321 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-212ENST00000484809 NISCHQ9Y2I1 1504 aa33.89■■■■□ 3.02
SNX5-212ENST00000484809 CCDC180Q9P1Z9 1646 aa30.26■■■□□ 2.43
SNX5-212ENST00000484809 AEBP2Q6ZN18 517 aaPredicted RBP29.78■■■□□ 2.36
SNX5-212ENST00000484809 ABCC9O60706 1549 aa29.73■■■□□ 2.35
SNX5-212ENST00000484809 CHIC1Q5VXU3 224 aa28.85■■■□□ 2.21
SNX5-212ENST00000484809 RB1CC1Q8TDY2 1594 aa28.54■■■□□ 2.16
SNX5-212ENST00000484809 NACADO15069 1562 aa28.46■■■□□ 2.15
SNX5-212ENST00000484809 DCAF8L2P0C7V8 631 aa28.34■■■□□ 2.13
SNX5-212ENST00000484809 MYO15BQ96JP2 1530 aa28.25■■■□□ 2.11
SNX5-212ENST00000484809 ZCCHC6Q5VYS8 1495 aaKnown RBP28.19■■■□□ 2.1
SNX5-212ENST00000484809 DCAF1Q9Y4B6 1507 aa28.05■■■□□ 2.08
SNX5-212ENST00000484809 UNC13AQ9UPW8 1703 aa27.99■■■□□ 2.07
SNX5-212ENST00000484809 PABPN1Q86U42 306 aaKnown RBP eCLIP27.73■■■□□ 2.03
SNX5-212ENST00000484809 BICRAQ9NZM4 1560 aa27.71■■■□□ 2.03
SNX5-212ENST00000484809 SCRIBQ14160 1630 aa27.55■■■□□ 2
SNX5-212ENST00000484809 DNAJC5BQ9UF47 199 aa27.47■■□□□ 1.99
SNX5-212ENST00000484809 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
SNX5-212ENST00000484809 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
SNX5-212ENST00000484809 CC2D2AQ9P2K1 1620 aa26.92■■□□□ 1.9
SNX5-212ENST00000484809 CECR2Q9BXF3 1484 aa26.73■■□□□ 1.87
SNX5-212ENST00000484809 SMARCA4P51532 1647 aa26.36■■□□□ 1.81
SNX5-212ENST00000484809 BAZ1AQ9NRL2 1556 aaPredicted RBP26.28■■□□□ 1.8
SNX5-212ENST00000484809 NCAPD3P42695 1498 aa26.26■■□□□ 1.79
SNX5-212ENST00000484809 ATAD2BQ9ULI0 1458 aa26.23■■□□□ 1.79
SNX5-212ENST00000484809 SMARCA2P51531 1590 aa26.2■■□□□ 1.79
SNX5-212ENST00000484809 HMGXB3Q12766 1538 aa26.12■■□□□ 1.77
SNX5-212ENST00000484809 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
SNX5-212ENST00000484809 PEG3Q9GZU2 1588 aa26.11■■□□□ 1.77
SNX5-212ENST00000484809 BAZ1BQ9UIG0 1483 aaKnown RBP26■■□□□ 1.75
SNX5-212ENST00000484809 WIZO95785 1651 aa25.86■■□□□ 1.73
SNX5-212ENST00000484809 RSF1Q96T23 1441 aaPredicted RBP25.73■■□□□ 1.71
SNX5-212ENST00000484809 NESP48681 1621 aa25.69■■□□□ 1.7
SNX5-212ENST00000484809 ERCC6Q03468 1493 aa25.63■■□□□ 1.69
SNX5-212ENST00000484809 LAMC3Q9Y6N6 1575 aa25.61■■□□□ 1.69
SNX5-212ENST00000484809 TOP2AP11388 1531 aaKnown RBP25.54■■□□□ 1.68
SNX5-212ENST00000484809 CADPSQ9ULU8 1353 aa25.47■■□□□ 1.67
SNX5-212ENST00000484809 CUX2O14529 1486 aa25.45■■□□□ 1.67
SNX5-212ENST00000484809 KIF21AQ7Z4S6 1674 aa25.43■■□□□ 1.66
SNX5-212ENST00000484809 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
SNX5-212ENST00000484809 THOC2Q8NI27 1593 aaKnown RBP25.36■■□□□ 1.65
SNX5-212ENST00000484809 PHF23Q9BUL5 403 aaPredicted RBP25.35■■□□□ 1.65
SNX5-212ENST00000484809 SENP3Q9H4L4 574 aaPredicted RBP25.32■■□□□ 1.64
SNX5-212ENST00000484809 CFTRP13569 1480 aa25.29■■□□□ 1.64
SNX5-212ENST00000484809 CCDC88BA6NC98 1476 aa25.24■■□□□ 1.63
SNX5-212ENST00000484809 FANCD2Q9BXW9 1451 aa25.18■■□□□ 1.62
SNX5-212ENST00000484809 PRDM2Q13029 1718 aa25.18■■□□□ 1.62
SNX5-212ENST00000484809 MRC2Q9UBG0 1479 aa25.16■■□□□ 1.62
SNX5-212ENST00000484809 CEP164Q9UPV0 1460 aa25.16■■□□□ 1.62
SNX5-212ENST00000484809 WDR62O43379 1518 aa25.11■■□□□ 1.61
SNX5-212ENST00000484809 URB2Q14146 1524 aaKnown RBP24.96■■□□□ 1.59
SNX5-212ENST00000484809 SUPT5HO00267 1087 aaKnown RBP24.9■■□□□ 1.58
SNX5-212ENST00000484809 DNAJC5Q9H3Z4 198 aa24.89■■□□□ 1.58
SNX5-212ENST00000484809 TOPBP1Q92547 1522 aa24.77■■□□□ 1.56
SNX5-212ENST00000484809 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
SNX5-212ENST00000484809 DNMBPQ6XZF7 1577 aa24.72■■□□□ 1.55
SNX5-212ENST00000484809 IFT140Q96RY7 1462 aa24.65■■□□□ 1.54
SNX5-212ENST00000484809 ZNF608Q9ULD9 1512 aaPredicted RBP24.55■■□□□ 1.52
SNX5-212ENST00000484809 TARBP1Q13395 1621 aaKnown RBP24.55■■□□□ 1.52
SNX5-212ENST00000484809 POLA1P09884 1462 aaPredicted RBP24.54■■□□□ 1.52
SNX5-212ENST00000484809 CUX1P39880 1505 aa24.51■■□□□ 1.51
SNX5-212ENST00000484809 EIF4G3O43432 1585 aaKnown RBP24.48■■□□□ 1.51
SNX5-212ENST00000484809 FGD5Q6ZNL6 1462 aa24.45■■□□□ 1.5
SNX5-212ENST00000484809 RAD54L2Q9Y4B4 1467 aa24.43■■□□□ 1.5
SNX5-212ENST00000484809 SOGA1O94964 1423 aa24.43■■□□□ 1.5
SNX5-212ENST00000484809 AQRO60306 1485 aaKnown RBP eCLIP24.39■■□□□ 1.495e-9■■■■□ 20.4
SNX5-212ENST00000484809 OSCARQ8IYS5 282 aa24.35■■□□□ 1.49
SNX5-212ENST00000484809 WDR97A6NE52 1622 aa24.33■■□□□ 1.48
SNX5-212ENST00000484809 TDRD9Q8NDG6 1382 aaKnown RBP24.31■■□□□ 1.48
SNX5-212ENST00000484809 BIVM-ERCC5R4GMW8 1640 aa24.29■■□□□ 1.48
SNX5-212ENST00000484809 TOP2BQ02880 1626 aa24.27■■□□□ 1.48
SNX5-212ENST00000484809 WRNQ14191 1432 aaPredicted RBP eCLIP24.26■■□□□ 1.47
SNX5-212ENST00000484809 SYNJ1O43426 1573 aa24.24■■□□□ 1.47
SNX5-212ENST00000484809 CHD1O14646 1710 aa24.24■■□□□ 1.47
SNX5-212ENST00000484809 ABCA10Q8WWZ4 1543 aa24.22■■□□□ 1.47
SNX5-212ENST00000484809 PBRM1Q86U86 1689 aa24.16■■□□□ 1.46
SNX5-212ENST00000484809 GRIN2BQ13224 1484 aa24.16■■□□□ 1.46
SNX5-212ENST00000484809 SNAPC4Q5SXM2 1469 aa24.16■■□□□ 1.46
SNX5-212ENST00000484809 ABCA5Q8WWZ7 1642 aa24.15■■□□□ 1.46
SNX5-212ENST00000484809 GAPVD1Q14C86 1478 aa24.15■■□□□ 1.46
SNX5-212ENST00000484809 MAGI1Q96QZ7 1491 aaPredicted RBP24.13■■□□□ 1.45
SNX5-212ENST00000484809 FBLN2P98095 1184 aa24.1■■□□□ 1.45
SNX5-212ENST00000484809 SYNJ2O15056 1496 aa24.03■■□□□ 1.44
SNX5-212ENST00000484809 CHMP7Q8WUX9 453 aaPredicted RBP24.02■■□□□ 1.44
SNX5-212ENST00000484809 RIMBP3CA6NJZ7 1639 aa24.02■■□□□ 1.44
SNX5-212ENST00000484809 RIMBP3BA6NNM3 1639 aa24.02■■□□□ 1.44
SNX5-212ENST00000484809 RIMBP3Q9UFD9 1639 aa24.02■■□□□ 1.44
SNX5-212ENST00000484809 ARHGEF11O15085 1522 aa23.97■■□□□ 1.43
SNX5-212ENST00000484809 TRIM41Q8WV44 630 aa23.95■■□□□ 1.42
SNX5-212ENST00000484809 CLASP1Q7Z460 1538 aa23.93■■□□□ 1.42
SNX5-212ENST00000484809 ERICH3Q5RHP9 1530 aa23.93■■□□□ 1.42
SNX5-212ENST00000484809 ADAMTS12P58397 1594 aa23.92■■□□□ 1.42
SNX5-212ENST00000484809 GRIN2AQ12879 1464 aa23.86■■□□□ 1.41
SNX5-212ENST00000484809 FHAD1B1AJZ9 1412 aa23.86■■□□□ 1.41
SNX5-212ENST00000484809 KIF27Q86VH2 1401 aa23.77■■□□□ 1.4
SNX5-212ENST00000484809 CEP170Q5SW79 1584 aa23.77■■□□□ 1.4
SNX5-212ENST00000484809 ARAP1Q96P48 1450 aa23.76■■□□□ 1.39
SNX5-212ENST00000484809 NUP160Q12769 1436 aa23.76■■□□□ 1.39
SNX5-212ENST00000484809 CYB5RLQ6IPT4 315 aa23.73■■□□□ 1.39
SNX5-212ENST00000484809 IGF1RP08069 1367 aa23.71■■□□□ 1.39
SNX5-212ENST00000484809 CUL7Q14999 1698 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms