RNA–Protein interactions for RNA: ENST00000483497.6

NUP214-208, Transcript of nucleoporin 214, humanhuman

TSL 2 BASIC

Gene NUP214, Length 3,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-208ENST00000483497 CHMP7Q8WUX9 453 aaPredicted RBP12.57□□□□□ -0.4
NUP214-208ENST00000483497 P3H3Q8IVL6 736 aa12.57□□□□□ -0.4
NUP214-208ENST00000483497 ARHGAP35Q9NRY4 1499 aa12.57□□□□□ -0.4
NUP214-208ENST00000483497 SYNJ2O15056 1496 aa12.56□□□□□ -0.4
NUP214-208ENST00000483497 GRIN2AQ12879 1464 aa12.56□□□□□ -0.4
NUP214-208ENST00000483497 ARAP1Q96P48 1450 aa12.56□□□□□ -0.4
NUP214-208ENST00000483497 SLC24A1O60721 1099 aa12.54□□□□□ -0.4
NUP214-208ENST00000483497 CEP170Q5SW79 1584 aa12.51□□□□□ -0.41
NUP214-208ENST00000483497 VPS8Q8N3P4 1428 aa12.5□□□□□ -0.41
NUP214-208ENST00000483497 TTBK1Q5TCY1 1321 aaPredicted RBP12.5□□□□□ -0.41
NUP214-208ENST00000483497 FHOD3Q2V2M9 1422 aa12.49□□□□□ -0.41
NUP214-208ENST00000483497 CHD1O14646 1710 aa12.49□□□□□ -0.41
NUP214-208ENST00000483497 IQGAP2Q13576 1575 aa12.49□□□□□ -0.41
NUP214-208ENST00000483497 KIAA0586Q9BVV6 1533 aa12.46□□□□□ -0.41
NUP214-208ENST00000483497 NUP160Q12769 1436 aa12.46□□□□□ -0.41
NUP214-208ENST00000483497 SAMD9Q5K651 1589 aa12.45□□□□□ -0.42
NUP214-208ENST00000483497 EFCAB5A4FU69 1503 aa12.44□□□□□ -0.42
NUP214-208ENST00000483497 UGGT2Q9NYU1 1516 aa12.41□□□□□ -0.42
NUP214-208ENST00000483497 DISP1Q96F81 1524 aa12.4□□□□□ -0.42
NUP214-208ENST00000483497 ATP1B4Q9UN42 357 aaPredicted RBP12.4□□□□□ -0.42
NUP214-208ENST00000483497 JPH4Q96JJ6 628 aa12.4□□□□□ -0.43
NUP214-208ENST00000483497 PCF11O94913 1555 aaKnown RBP12.39□□□□□ -0.43
NUP214-208ENST00000483497 PCGF6Q9BYE7 350 aa12.39□□□□□ -0.43
NUP214-208ENST00000483497 KIAA0556O60303 1618 aa12.37□□□□□ -0.43
NUP214-208ENST00000483497 APLP2Q06481 763 aa12.37□□□□□ -0.43
NUP214-208ENST00000483497 KANK4Q5T7N3 995 aaPredicted RBP12.36□□□□□ -0.43
NUP214-208ENST00000483497 FMN1Q68DA7 1419 aa12.34□□□□□ -0.43
NUP214-208ENST00000483497 TRIM26Q12899 539 aaPredicted RBP12.33□□□□□ -0.44
NUP214-208ENST00000483497 PRG4Q92954 1404 aaPredicted RBP12.33□□□□□ -0.44
NUP214-208ENST00000483497 ARID3CA6NKF2 412 aa12.33□□□□□ -0.44
NUP214-208ENST00000483497 HRCP23327 699 aa12.33□□□□□ -0.44
NUP214-208ENST00000483497 CASKIN1Q8WXD9 1431 aa12.33□□□□□ -0.44
NUP214-208ENST00000483497 CLASP1Q7Z460 1538 aa12.32□□□□□ -0.44
NUP214-208ENST00000483497 ERCC6L2Q5T890 1561 aa12.32□□□□□ -0.44
NUP214-208ENST00000483497 FYCO1Q9BQS8 1478 aa12.31□□□□□ -0.44
NUP214-208ENST00000483497 LRRIQ1Q96JM4 1722 aa12.31□□□□□ -0.44
NUP214-208ENST00000483497 CARMIL2Q6F5E8 1435 aa12.3□□□□□ -0.44
NUP214-208ENST00000483497 TIAM1Q13009 1591 aa12.3□□□□□ -0.44
NUP214-208ENST00000483497 SHROOM2Q13796 1616 aa12.29□□□□□ -0.44
NUP214-208ENST00000483497 PLB1Q6P1J6 1458 aa12.27□□□□□ -0.44
NUP214-208ENST00000483497 CFAP43Q8NDM7 1665 aa12.26□□□□□ -0.45
NUP214-208ENST00000483497 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
NUP214-208ENST00000483497 CDK13Q14004 1512 aaKnown RBP12.25□□□□□ -0.45
NUP214-208ENST00000483497 LRRC9Q6ZRR7 1453 aa12.25□□□□□ -0.45
NUP214-208ENST00000483497 HECW1Q76N89 1606 aa12.24□□□□□ -0.45
NUP214-208ENST00000483497 RAPGEF6Q8TEU7 1601 aa12.24□□□□□ -0.45
NUP214-208ENST00000483497 MAP3K1Q13233 1512 aa12.24□□□□□ -0.45
NUP214-208ENST00000483497 NUP153P49790 1475 aaKnown RBP12.23□□□□□ -0.45
NUP214-208ENST00000483497 PTPRGP23470 1445 aa12.23□□□□□ -0.45
NUP214-208ENST00000483497 EPRSP07814 1512 aaKnown RBP12.23□□□□□ -0.45
NUP214-208ENST00000483497 MAGI3Q5TCQ9 1506 aa12.21□□□□□ -0.45
NUP214-208ENST00000483497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
NUP214-208ENST00000483497 HNRNPUL2Q1KMD3 747 aaKnown RBP12.2□□□□□ -0.46
NUP214-208ENST00000483497 ABCA8O94911 1581 aa12.19□□□□□ -0.46
NUP214-208ENST00000483497 MTUS2Q5JR59 1369 aa12.18□□□□□ -0.46
NUP214-208ENST00000483497 CCDC18Q5T9S5 1454 aa12.18□□□□□ -0.46
NUP214-208ENST00000483497 PHLDB1Q86UU1 1377 aa12.17□□□□□ -0.46
NUP214-208ENST00000483497 UACAQ9BZF9 1416 aa12.15□□□□□ -0.47
NUP214-208ENST00000483497 ATP10BO94823 1461 aa12.14□□□□□ -0.47
NUP214-208ENST00000483497 EHBP1L1Q8N3D4 1523 aa12.13□□□□□ -0.47
NUP214-208ENST00000483497 NCOA2Q15596 1464 aa12.12□□□□□ -0.47
NUP214-208ENST00000483497 SUPT6HQ7KZ85 1726 aaKnown RBP12.11□□□□□ -0.47
NUP214-208ENST00000483497 ABCC2Q92887 1545 aa12.1□□□□□ -0.47
NUP214-208ENST00000483497 RRBP1Q9P2E9 1410 aaKnown RBP12.1□□□□□ -0.47
NUP214-208ENST00000483497 CCNB3Q8WWL7 1395 aa12.09□□□□□ -0.47
NUP214-208ENST00000483497 ITGAEP38570 1179 aa12.09□□□□□ -0.47
NUP214-208ENST00000483497 FAM50AQ14320 339 aaKnown RBP12.08□□□□□ -0.48
NUP214-208ENST00000483497 CDK11AQ9UQ88 783 aaPredicted RBP12.08□□□□□ -0.48
NUP214-208ENST00000483497 KIF14Q15058 1648 aa12.07□□□□□ -0.48
NUP214-208ENST00000483497 ARHGEF11O15085 1522 aa12.07□□□□□ -0.48
NUP214-208ENST00000483497 ADCY10Q96PN6 1610 aa12.07□□□□□ -0.48
NUP214-208ENST00000483497 TROQ12816 1431 aaPredicted RBP12.07□□□□□ -0.48
NUP214-208ENST00000483497 PLEKHD1A6NEE1 506 aa12.06□□□□□ -0.48
NUP214-208ENST00000483497 ZCCHC11Q5TAX3 1644 aaKnown RBP12.05□□□□□ -0.48
NUP214-208ENST00000483497 MYOM3Q5VTT5 1437 aa12.05□□□□□ -0.48
NUP214-208ENST00000483497 FGD6Q6ZV73 1430 aa12.05□□□□□ -0.48
NUP214-208ENST00000483497 UHRF1BP1LA0JNW5 1464 aa12.04□□□□□ -0.48
NUP214-208ENST00000483497 KDM5BQ9UGL1 1544 aa12.02□□□□□ -0.48
NUP214-208ENST00000483497 RIMBP3CA6NJZ7 1639 aa12.02□□□□□ -0.49
NUP214-208ENST00000483497 RIMBP3BA6NNM3 1639 aa12.02□□□□□ -0.49
NUP214-208ENST00000483497 RIMBP3Q9UFD9 1639 aa12.02□□□□□ -0.49
NUP214-208ENST00000483497 KCNH8Q96L42 1107 aa12.02□□□□□ -0.49
NUP214-208ENST00000483497 CYB5RLQ6IPT4 315 aa12.01□□□□□ -0.49
NUP214-208ENST00000483497 ZNF644Q9H582 1327 aaPredicted RBP12□□□□□ -0.49
NUP214-208ENST00000483497 PTPN23Q9H3S7 1636 aa12□□□□□ -0.49
NUP214-208ENST00000483497 GPATCH8Q9UKJ3 1502 aaKnown RBP11.98□□□□□ -0.49
NUP214-208ENST00000483497 ABCC10Q5T3U5 1492 aa11.98□□□□□ -0.49
NUP214-208ENST00000483497 ZNF777Q9ULD5 760 aaPredicted RBP11.97□□□□□ -0.49
NUP214-208ENST00000483497 PTPRKQ15262 1439 aa11.97□□□□□ -0.49
NUP214-208ENST00000483497 TTC37Q6PGP7 1564 aa11.96□□□□□ -0.49
NUP214-208ENST00000483497 CDC42BPAQ5VT25 1732 aa11.96□□□□□ -0.49
NUP214-208ENST00000483497 SCAF1Q9H7N4 1312 aaKnown RBP11.96□□□□□ -0.49
NUP214-208ENST00000483497 CFDP1Q9UEE9 299 aaPredicted RBP11.96□□□□□ -0.49
NUP214-208ENST00000483497 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.95□□□□□ -0.5
NUP214-208ENST00000483497 MIA2Q96PC5 1412 aa11.95□□□□□ -0.5
NUP214-208ENST00000483497 TCOF1Q13428 1488 aaKnown RBP11.95□□□□□ -0.5
NUP214-208ENST00000483497 ASXL2Q76L83 1435 aa11.94□□□□□ -0.5
NUP214-208ENST00000483497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.94□□□□□ -0.5
NUP214-208ENST00000483497 ITSN2Q9NZM3 1697 aa11.93□□□□□ -0.5
NUP214-208ENST00000483497 NPM1P06748 294 aaKnown RBP eCLIP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms