RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 FHAD1B1AJZ9 1412 aa16.23■□□□□ 0.19
APTX-225ENST00000482687 ARAP1Q96P48 1450 aa16.19■□□□□ 0.18
APTX-225ENST00000482687 ARHGAP35Q9NRY4 1499 aa16.18■□□□□ 0.18
APTX-225ENST00000482687 P3H3Q8IVL6 736 aa16.17■□□□□ 0.18
APTX-225ENST00000482687 TTBK1Q5TCY1 1321 aaPredicted RBP16.17■□□□□ 0.18
APTX-225ENST00000482687 FBLN2P98095 1184 aa16.15■□□□□ 0.18
APTX-225ENST00000482687 VPS8Q8N3P4 1428 aa16.15■□□□□ 0.18
APTX-225ENST00000482687 PCGF6Q9BYE7 350 aa16.13■□□□□ 0.17
APTX-225ENST00000482687 MAGI1Q96QZ7 1491 aaPredicted RBP16.13■□□□□ 0.17
APTX-225ENST00000482687 CHMP7Q8WUX9 453 aaPredicted RBP16.12■□□□□ 0.17
APTX-225ENST00000482687 GRIN2AQ12879 1464 aa16.11■□□□□ 0.17
APTX-225ENST00000482687 SYNJ2O15056 1496 aa16.09■□□□□ 0.17
APTX-225ENST00000482687 FHOD3Q2V2M9 1422 aa16.07■□□□□ 0.16
APTX-225ENST00000482687 IQGAP2Q13576 1575 aa16.06■□□□□ 0.16
APTX-225ENST00000482687 CEP170Q5SW79 1584 aa16.05■□□□□ 0.16
APTX-225ENST00000482687 TRIM26Q12899 539 aaPredicted RBP16.05■□□□□ 0.16
APTX-225ENST00000482687 CHD1O14646 1710 aa16.04■□□□□ 0.16
APTX-225ENST00000482687 EFCAB5A4FU69 1503 aa16.04■□□□□ 0.16
APTX-225ENST00000482687 SAMD9Q5K651 1589 aa16.03■□□□□ 0.16
APTX-225ENST00000482687 APLP2Q06481 763 aa16.02■□□□□ 0.16
APTX-225ENST00000482687 ATP1B4Q9UN42 357 aaPredicted RBP15.99■□□□□ 0.15
APTX-225ENST00000482687 KIAA0586Q9BVV6 1533 aa15.99■□□□□ 0.15
APTX-225ENST00000482687 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
APTX-225ENST00000482687 PCF11O94913 1555 aaKnown RBP15.98■□□□□ 0.15
APTX-225ENST00000482687 NUP160Q12769 1436 aa15.96■□□□□ 0.15
APTX-225ENST00000482687 UGGT2Q9NYU1 1516 aa15.95■□□□□ 0.14
APTX-225ENST00000482687 KANK4Q5T7N3 995 aaPredicted RBP15.93■□□□□ 0.14
APTX-225ENST00000482687 DISP1Q96F81 1524 aa15.91■□□□□ 0.14
APTX-225ENST00000482687 KIAA0556O60303 1618 aa15.91■□□□□ 0.14
APTX-225ENST00000482687 FMN1Q68DA7 1419 aa15.9■□□□□ 0.14
APTX-225ENST00000482687 LRRIQ1Q96JM4 1722 aa15.89■□□□□ 0.13
APTX-225ENST00000482687 ZEB1P37275 1124 aaPredicted RBP15.89■□□□□ 0.13
APTX-225ENST00000482687 JPH4Q96JJ6 628 aa15.89■□□□□ 0.13
APTX-225ENST00000482687 TIAM1Q13009 1591 aa15.89■□□□□ 0.13
APTX-225ENST00000482687 CASKIN1Q8WXD9 1431 aa15.89■□□□□ 0.13
APTX-225ENST00000482687 FYCO1Q9BQS8 1478 aa15.88■□□□□ 0.13
APTX-225ENST00000482687 CFAP43Q8NDM7 1665 aa15.86■□□□□ 0.13
APTX-225ENST00000482687 ARID3CA6NKF2 412 aa15.84■□□□□ 0.13
APTX-225ENST00000482687 MAP3K1Q13233 1512 aa15.81■□□□□ 0.12
APTX-225ENST00000482687 CARMIL2Q6F5E8 1435 aa15.8■□□□□ 0.12
APTX-225ENST00000482687 PRG4Q92954 1404 aaPredicted RBP15.8■□□□□ 0.12
APTX-225ENST00000482687 LRRC9Q6ZRR7 1453 aa15.8■□□□□ 0.12
APTX-225ENST00000482687 HECW1Q76N89 1606 aa15.78■□□□□ 0.12
APTX-225ENST00000482687 SHROOM2Q13796 1616 aa15.77■□□□□ 0.11
APTX-225ENST00000482687 RAPGEF6Q8TEU7 1601 aa15.77■□□□□ 0.11
APTX-225ENST00000482687 ERCC6L2Q5T890 1561 aa15.77■□□□□ 0.11
APTX-225ENST00000482687 CLASP1Q7Z460 1538 aa15.77■□□□□ 0.11
APTX-225ENST00000482687 CDK13Q14004 1512 aaKnown RBP15.76■□□□□ 0.11
APTX-225ENST00000482687 PLB1Q6P1J6 1458 aa15.74■□□□□ 0.11
APTX-225ENST00000482687 EPRSP07814 1512 aaKnown RBP15.73■□□□□ 0.11
APTX-225ENST00000482687 MAGI3Q5TCQ9 1506 aa15.71■□□□□ 0.11
APTX-225ENST00000482687 HNRNPUL2Q1KMD3 747 aaKnown RBP15.71■□□□□ 0.11
APTX-225ENST00000482687 MTUS2Q5JR59 1369 aa15.71■□□□□ 0.1
APTX-225ENST00000482687 NUP153P49790 1475 aaKnown RBP15.71■□□□□ 0.1
APTX-225ENST00000482687 CCDC18Q5T9S5 1454 aa15.71■□□□□ 0.1
APTX-225ENST00000482687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
APTX-225ENST00000482687 PTPRGP23470 1445 aa15.69■□□□□ 0.1
APTX-225ENST00000482687 PHLDB1Q86UU1 1377 aa15.68■□□□□ 0.1
APTX-225ENST00000482687 ABCA8O94911 1581 aa15.67■□□□□ 0.1
APTX-225ENST00000482687 EHBP1L1Q8N3D4 1523 aa15.65■□□□□ 0.1
APTX-225ENST00000482687 SUPT6HQ7KZ85 1726 aaKnown RBP15.65■□□□□ 0.1
APTX-225ENST00000482687 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
APTX-225ENST00000482687 RRBP1Q9P2E9 1410 aaKnown RBP15.64■□□□□ 0.09
APTX-225ENST00000482687 ITGAEP38570 1179 aa15.63■□□□□ 0.09
APTX-225ENST00000482687 CCNB3Q8WWL7 1395 aa15.62■□□□□ 0.09
APTX-225ENST00000482687 NCOA2Q15596 1464 aa15.62■□□□□ 0.09
APTX-225ENST00000482687 ACIN1Q9UKV3 1341 aaKnown RBP15.61■□□□□ 0.09
APTX-225ENST00000482687 FAM50AQ14320 339 aaKnown RBP15.59■□□□□ 0.09
APTX-225ENST00000482687 ATP10BO94823 1461 aa15.58■□□□□ 0.09
APTX-225ENST00000482687 UACAQ9BZF9 1416 aa15.58■□□□□ 0.08
APTX-225ENST00000482687 CDK11AQ9UQ88 783 aaPredicted RBP15.55■□□□□ 0.08
APTX-225ENST00000482687 ARHGEF11O15085 1522 aa15.55■□□□□ 0.08
APTX-225ENST00000482687 KIF14Q15058 1648 aa15.54■□□□□ 0.08
APTX-225ENST00000482687 FGD6Q6ZV73 1430 aa15.54■□□□□ 0.08
APTX-225ENST00000482687 MYOM3Q5VTT5 1437 aa15.53■□□□□ 0.08
APTX-225ENST00000482687 TROQ12816 1431 aaPredicted RBP15.53■□□□□ 0.08
APTX-225ENST00000482687 ABCC2Q92887 1545 aa15.53■□□□□ 0.08
APTX-225ENST00000482687 PLEKHD1A6NEE1 506 aa15.51■□□□□ 0.07
APTX-225ENST00000482687 PTPN23Q9H3S7 1636 aa15.5■□□□□ 0.07
APTX-225ENST00000482687 ADCY10Q96PN6 1610 aa15.49■□□□□ 0.07
APTX-225ENST00000482687 CCER1Q8TC90 406 aaPredicted RBP15.48■□□□□ 0.07
APTX-225ENST00000482687 ZCCHC11Q5TAX3 1644 aaKnown RBP15.48■□□□□ 0.07
APTX-225ENST00000482687 UHRF1BP1LA0JNW5 1464 aa15.45■□□□□ 0.06
APTX-225ENST00000482687 CDC42BPAQ5VT25 1732 aa15.43■□□□□ 0.06
APTX-225ENST00000482687 ZNF644Q9H582 1327 aaPredicted RBP15.42■□□□□ 0.06
APTX-225ENST00000482687 NEUROD1Q13562 356 aa15.42■□□□□ 0.06
APTX-225ENST00000482687 KCNH8Q96L42 1107 aa15.42■□□□□ 0.06
APTX-225ENST00000482687 ITSN2Q9NZM3 1697 aa15.42■□□□□ 0.06
APTX-225ENST00000482687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.42■□□□□ 0.06
APTX-225ENST00000482687 CENPBP07199 599 aaPredicted RBP15.42■□□□□ 0.06
APTX-225ENST00000482687 KDM5BQ9UGL1 1544 aa15.41■□□□□ 0.06
APTX-225ENST00000482687 GPATCH8Q9UKJ3 1502 aaKnown RBP15.41■□□□□ 0.06
APTX-225ENST00000482687 TCOF1Q13428 1488 aaKnown RBP15.41■□□□□ 0.06
APTX-225ENST00000482687 PTPRKQ15262 1439 aa15.41■□□□□ 0.06
APTX-225ENST00000482687 ZNF777Q9ULD5 760 aaPredicted RBP15.41■□□□□ 0.06
APTX-225ENST00000482687 ABCC10Q5T3U5 1492 aa15.41■□□□□ 0.06
APTX-225ENST00000482687 MIA2Q96PC5 1412 aa15.4■□□□□ 0.06
APTX-225ENST00000482687 CFDP1Q9UEE9 299 aaPredicted RBP15.39■□□□□ 0.05
APTX-225ENST00000482687 TTC37Q6PGP7 1564 aa15.37■□□□□ 0.05
APTX-225ENST00000482687 CHIC2Q9UKJ5 165 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms