RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 NISCHQ9Y2I1 1504 aa23.39■■□□□ 1.34
APTX-225ENST00000482687 CCDC180Q9P1Z9 1646 aa20.39■□□□□ 0.85
APTX-225ENST00000482687 ZCCHC6Q5VYS8 1495 aaKnown RBP19.63■□□□□ 0.73
APTX-225ENST00000482687 DCAF8L2P0C7V8 631 aa19.52■□□□□ 0.71
APTX-225ENST00000482687 ABCC9O60706 1549 aa19.46■□□□□ 0.71
APTX-225ENST00000482687 DCAF1Q9Y4B6 1507 aa19.24■□□□□ 0.67
APTX-225ENST00000482687 SHROOM4Q9ULL8 1493 aa19.24■□□□□ 0.67
APTX-225ENST00000482687 MYO15BQ96JP2 1530 aa18.99■□□□□ 0.63
APTX-225ENST00000482687 NACADO15069 1562 aa18.99■□□□□ 0.63
APTX-225ENST00000482687 SCRIBQ14160 1630 aa18.88■□□□□ 0.61
APTX-225ENST00000482687 RB1CC1Q8TDY2 1594 aa18.88■□□□□ 0.61
APTX-225ENST00000482687 UNC13AQ9UPW8 1703 aa18.61■□□□□ 0.57
APTX-225ENST00000482687 SUPT5HO00267 1087 aaKnown RBP18.46■□□□□ 0.54
APTX-225ENST00000482687 PABPN1Q86U42 306 aaKnown RBP eCLIP18.39■□□□□ 0.53
APTX-225ENST00000482687 BICRAQ9NZM4 1560 aa18.35■□□□□ 0.53
APTX-225ENST00000482687 CECR2Q9BXF3 1484 aa18.26■□□□□ 0.51
APTX-225ENST00000482687 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
APTX-225ENST00000482687 MROH2BQ7Z745 1585 aa18.13■□□□□ 0.49
APTX-225ENST00000482687 BAZ1AQ9NRL2 1556 aaPredicted RBP18.05■□□□□ 0.48
APTX-225ENST00000482687 WIZO95785 1651 aa18.03■□□□□ 0.48
APTX-225ENST00000482687 SMARCA4P51532 1647 aa18.02■□□□□ 0.48
APTX-225ENST00000482687 EIF4G1Q04637 1599 aaKnown RBP17.79■□□□□ 0.44
APTX-225ENST00000482687 TOP2AP11388 1531 aaKnown RBP17.74■□□□□ 0.43
APTX-225ENST00000482687 ATAD2BQ9ULI0 1458 aa17.72■□□□□ 0.43
APTX-225ENST00000482687 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
APTX-225ENST00000482687 SMARCA2P51531 1590 aa17.67■□□□□ 0.42
APTX-225ENST00000482687 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
APTX-225ENST00000482687 CCDC88BA6NC98 1476 aa17.6■□□□□ 0.41
APTX-225ENST00000482687 CC2D2AQ9P2K1 1620 aa17.58■□□□□ 0.4
APTX-225ENST00000482687 CHIC1Q5VXU3 224 aa17.56■□□□□ 0.4
APTX-225ENST00000482687 NCAPD3P42695 1498 aa17.52■□□□□ 0.4
APTX-225ENST00000482687 HMGXB3Q12766 1538 aa17.49■□□□□ 0.39
APTX-225ENST00000482687 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
APTX-225ENST00000482687 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
APTX-225ENST00000482687 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
APTX-225ENST00000482687 CFTRP13569 1480 aa17.14■□□□□ 0.33
APTX-225ENST00000482687 PRDM2Q13029 1718 aa17.11■□□□□ 0.33
APTX-225ENST00000482687 CADPSQ9ULU8 1353 aa17.1■□□□□ 0.33
APTX-225ENST00000482687 FAM9AQ8IZU1 332 aaPredicted RBP17.09■□□□□ 0.33
APTX-225ENST00000482687 NESP48681 1621 aa17.08■□□□□ 0.33
APTX-225ENST00000482687 WRNQ14191 1432 aaPredicted RBP eCLIP17.08■□□□□ 0.32
APTX-225ENST00000482687 SYNJ1O43426 1573 aa17.07■□□□□ 0.32
APTX-225ENST00000482687 LOC105371045A0A1W2PR82 267 aa16.99■□□□□ 0.31
APTX-225ENST00000482687 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
APTX-225ENST00000482687 CUX1P39880 1505 aa16.95■□□□□ 0.3
APTX-225ENST00000482687 FANCD2Q9BXW9 1451 aa16.95■□□□□ 0.3
APTX-225ENST00000482687 TOP2BQ02880 1626 aa16.95■□□□□ 0.3
APTX-225ENST00000482687 EHMT2Q96KQ7 1210 aa16.94■□□□□ 0.3
APTX-225ENST00000482687 BIVM-ERCC5R4GMW8 1640 aa16.93■□□□□ 0.3
APTX-225ENST00000482687 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
APTX-225ENST00000482687 SOGA1O94964 1423 aa16.91■□□□□ 0.3
APTX-225ENST00000482687 RUSC2Q8N2Y8 1516 aa16.9■□□□□ 0.3
APTX-225ENST00000482687 KIF21AQ7Z4S6 1674 aa16.88■□□□□ 0.29
APTX-225ENST00000482687 HRCP23327 699 aa16.86■□□□□ 0.29
APTX-225ENST00000482687 CEP164Q9UPV0 1460 aa16.83■□□□□ 0.29
APTX-225ENST00000482687 PDS5BQ9NTI5 1447 aa16.82■□□□□ 0.28
APTX-225ENST00000482687 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.28
APTX-225ENST00000482687 FGD5Q6ZNL6 1462 aa16.77■□□□□ 0.28
APTX-225ENST00000482687 TOPBP1Q92547 1522 aa16.77■□□□□ 0.27
APTX-225ENST00000482687 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
APTX-225ENST00000482687 CSRNP3Q8WYN3 585 aa16.73■□□□□ 0.27
APTX-225ENST00000482687 EEA1Q15075 1411 aa16.73■□□□□ 0.27
APTX-225ENST00000482687 RAD54L2Q9Y4B4 1467 aa16.68■□□□□ 0.26
APTX-225ENST00000482687 POLA1P09884 1462 aaPredicted RBP16.68■□□□□ 0.26
APTX-225ENST00000482687 CUX2O14529 1486 aa16.66■□□□□ 0.26
APTX-225ENST00000482687 ERCC6Q03468 1493 aa16.66■□□□□ 0.26
APTX-225ENST00000482687 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
APTX-225ENST00000482687 KIF27Q86VH2 1401 aa16.63■□□□□ 0.25
APTX-225ENST00000482687 KIF21BO75037 1637 aa16.58■□□□□ 0.25
APTX-225ENST00000482687 UBTFP17480 764 aaKnown RBP16.58■□□□□ 0.24
APTX-225ENST00000482687 GOLGA3Q08378 1498 aa16.57■□□□□ 0.24
APTX-225ENST00000482687 WDR97A6NE52 1622 aa16.57■□□□□ 0.24
APTX-225ENST00000482687 ABCA10Q8WWZ4 1543 aa16.56■□□□□ 0.24
APTX-225ENST00000482687 RAPGEF2Q9Y4G8 1499 aa16.55■□□□□ 0.24
APTX-225ENST00000482687 WDR62O43379 1518 aa16.54■□□□□ 0.24
APTX-225ENST00000482687 THOC2Q8NI27 1593 aaKnown RBP16.54■□□□□ 0.24
APTX-225ENST00000482687 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.23
APTX-225ENST00000482687 TDRD9Q8NDG6 1382 aaKnown RBP16.51■□□□□ 0.23
APTX-225ENST00000482687 IGF1RP08069 1367 aa16.51■□□□□ 0.23
APTX-225ENST00000482687 PRXQ9BXM0 1461 aa16.5■□□□□ 0.23
APTX-225ENST00000482687 TNIKQ9UKE5 1360 aa16.49■□□□□ 0.23
APTX-225ENST00000482687 ABCA5Q8WWZ7 1642 aa16.47■□□□□ 0.23
APTX-225ENST00000482687 RANGAP1P46060 587 aaPredicted RBP16.46■□□□□ 0.22
APTX-225ENST00000482687 MYT1Q01538 1121 aa16.45■□□□□ 0.22
APTX-225ENST00000482687 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
APTX-225ENST00000482687 CEP162Q5TB80 1403 aa16.45■□□□□ 0.22
APTX-225ENST00000482687 GAPVD1Q14C86 1478 aa16.43■□□□□ 0.22
APTX-225ENST00000482687 CARMIL1Q5VZK9 1371 aa16.43■□□□□ 0.22
APTX-225ENST00000482687 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.22
APTX-225ENST00000482687 ZNF608Q9ULD9 1512 aaPredicted RBP16.41■□□□□ 0.22
APTX-225ENST00000482687 IFT140Q96RY7 1462 aa16.41■□□□□ 0.22
APTX-225ENST00000482687 PBRM1Q86U86 1689 aa16.4■□□□□ 0.22
APTX-225ENST00000482687 CUL7Q14999 1698 aa16.37■□□□□ 0.21
APTX-225ENST00000482687 EIF4G3O43432 1585 aaKnown RBP16.33■□□□□ 0.21
APTX-225ENST00000482687 CLIP1P30622 1438 aa16.32■□□□□ 0.2
APTX-225ENST00000482687 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
APTX-225ENST00000482687 PPARGC1BQ86YN6 1023 aaKnown RBP16.28■□□□□ 0.2
APTX-225ENST00000482687 ADAMTS12P58397 1594 aa16.26■□□□□ 0.19
APTX-225ENST00000482687 CTTNBP2Q8WZ74 1663 aa16.25■□□□□ 0.19
APTX-225ENST00000482687 SNAPC4Q5SXM2 1469 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms