RNA–Protein interactions for RNA: ENST00000482320.5

TNPO3-204, Transcript of transportin 3, humanhuman

TSL 1 (best) BASIC

Gene TNPO3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-204ENST00000482320 DIEXFQ68CQ4 756 aaKnown RBP12.37□□□□□ -0.43
TNPO3-204ENST00000482320 CUL7Q14999 1698 aa12.35□□□□□ -0.43
TNPO3-204ENST00000482320 CARMIL1Q5VZK9 1371 aa12.35□□□□□ -0.43
TNPO3-204ENST00000482320 P3H3Q8IVL6 736 aa12.35□□□□□ -0.43
TNPO3-204ENST00000482320 IGF1RP08069 1367 aa12.33□□□□□ -0.44
TNPO3-204ENST00000482320 GAPVD1Q14C86 1478 aa12.32□□□□□ -0.44
TNPO3-204ENST00000482320 ARHGEF11O15085 1522 aa12.3□□□□□ -0.44
TNPO3-204ENST00000482320 ZNF608Q9ULD9 1512 aaPredicted RBP12.3□□□□□ -0.44
TNPO3-204ENST00000482320 APLP2Q06481 763 aa12.29□□□□□ -0.44
TNPO3-204ENST00000482320 IFT140Q96RY7 1462 aa12.29□□□□□ -0.44
TNPO3-204ENST00000482320 PRXQ9BXM0 1461 aa12.29□□□□□ -0.44
TNPO3-204ENST00000482320 GOLGA3Q08378 1498 aa12.27□□□□□ -0.45
TNPO3-204ENST00000482320 RAPGEF2Q9Y4G8 1499 aa12.26□□□□□ -0.45
TNPO3-204ENST00000482320 ABCA10Q8WWZ4 1543 aa12.26□□□□□ -0.45
TNPO3-204ENST00000482320 WDR62O43379 1518 aa12.25□□□□□ -0.45
TNPO3-204ENST00000482320 ADCY10Q96PN6 1610 aa12.23□□□□□ -0.45
TNPO3-204ENST00000482320 GRIN2BQ13224 1484 aa12.21□□□□□ -0.46
TNPO3-204ENST00000482320 ARID3CA6NKF2 412 aa12.2□□□□□ -0.46
TNPO3-204ENST00000482320 HNRNPUL2Q1KMD3 747 aaKnown RBP12.19□□□□□ -0.46
TNPO3-204ENST00000482320 TNIKQ9UKE5 1360 aa12.19□□□□□ -0.46
TNPO3-204ENST00000482320 TARBP1Q13395 1621 aaKnown RBP12.18□□□□□ -0.46
TNPO3-204ENST00000482320 CEP162Q5TB80 1403 aa12.17□□□□□ -0.46
TNPO3-204ENST00000482320 SNAPC4Q5SXM2 1469 aa12.17□□□□□ -0.46
TNPO3-204ENST00000482320 CLIP1P30622 1438 aa12.17□□□□□ -0.46
TNPO3-204ENST00000482320 GCC2Q8IWJ2 1684 aa12.16□□□□□ -0.46
TNPO3-204ENST00000482320 BCANQ96GW7 911 aa12.16□□□□□ -0.46
TNPO3-204ENST00000482320 BCL11AQ9H165 835 aa12.15□□□□□ -0.46
TNPO3-204ENST00000482320 FHAD1B1AJZ9 1412 aa12.15□□□□□ -0.47
TNPO3-204ENST00000482320 CROCC2H7BZ55 1655 aa12.13□□□□□ -0.47
TNPO3-204ENST00000482320 PBRM1Q86U86 1689 aa12.12□□□□□ -0.47
TNPO3-204ENST00000482320 JPH4Q96JJ6 628 aa12.11□□□□□ -0.47
TNPO3-204ENST00000482320 EFCAB5A4FU69 1503 aa12.09□□□□□ -0.47
TNPO3-204ENST00000482320 OSCARQ8IYS5 282 aa12.09□□□□□ -0.47
TNPO3-204ENST00000482320 EIF4G3O43432 1585 aaKnown RBP12.09□□□□□ -0.47
TNPO3-204ENST00000482320 MIER1Q8N108 512 aa12.07□□□□□ -0.48
TNPO3-204ENST00000482320 SYNJ2O15056 1496 aa12.04□□□□□ -0.48
TNPO3-204ENST00000482320 MAGI1Q96QZ7 1491 aaPredicted RBP12.04□□□□□ -0.48
TNPO3-204ENST00000482320 GRIN2AQ12879 1464 aa12.03□□□□□ -0.48
TNPO3-204ENST00000482320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.02□□□□□ -0.48
TNPO3-204ENST00000482320 FHOD3Q2V2M9 1422 aa12.02□□□□□ -0.49
TNPO3-204ENST00000482320 RRBP1Q9P2E9 1410 aaKnown RBP11.98□□□□□ -0.49
TNPO3-204ENST00000482320 KDM5BQ9UGL1 1544 aa11.98□□□□□ -0.49
TNPO3-204ENST00000482320 ARAP1Q96P48 1450 aa11.98□□□□□ -0.49
TNPO3-204ENST00000482320 ADAMTS12P58397 1594 aa11.97□□□□□ -0.49
TNPO3-204ENST00000482320 CARMIL2Q6F5E8 1435 aa11.97□□□□□ -0.49
TNPO3-204ENST00000482320 BCORL1Q5H9F3 1711 aa11.97□□□□□ -0.49
TNPO3-204ENST00000482320 ZNF316A6NFI3 1004 aaPredicted RBP11.96□□□□□ -0.49
TNPO3-204ENST00000482320 ITGAEP38570 1179 aa11.95□□□□□ -0.5
TNPO3-204ENST00000482320 HECW1Q76N89 1606 aa11.95□□□□□ -0.5
TNPO3-204ENST00000482320 KIAA0586Q9BVV6 1533 aa11.95□□□□□ -0.5
TNPO3-204ENST00000482320 SHROOM2Q13796 1616 aa11.95□□□□□ -0.5
TNPO3-204ENST00000482320 NEURL4Q96JN8 1562 aa11.94□□□□□ -0.5
TNPO3-204ENST00000482320 PRG4Q92954 1404 aaPredicted RBP11.94□□□□□ -0.5
TNPO3-204ENST00000482320 ANP32EQ9BTT0 268 aa11.94□□□□□ -0.5
TNPO3-204ENST00000482320 ARHGAP35Q9NRY4 1499 aa11.94□□□□□ -0.5
TNPO3-204ENST00000482320 VPS8Q8N3P4 1428 aa11.93□□□□□ -0.5
TNPO3-204ENST00000482320 CYB5RLQ6IPT4 315 aa11.93□□□□□ -0.5
TNPO3-204ENST00000482320 NPM1P06748 294 aaKnown RBP eCLIP11.92□□□□□ -0.5
TNPO3-204ENST00000482320 TIAM1Q13009 1591 aa11.92□□□□□ -0.5
TNPO3-204ENST00000482320 KCNH8Q96L42 1107 aa11.91□□□□□ -0.5
TNPO3-204ENST00000482320 CDK11AQ9UQ88 783 aaPredicted RBP11.91□□□□□ -0.5
TNPO3-204ENST00000482320 PTPRGP23470 1445 aa11.91□□□□□ -0.5
TNPO3-204ENST00000482320 KANK4Q5T7N3 995 aaPredicted RBP11.9□□□□□ -0.5
TNPO3-204ENST00000482320 IQGAP2Q13576 1575 aa11.9□□□□□ -0.5
TNPO3-204ENST00000482320 FMN1Q68DA7 1419 aa11.89□□□□□ -0.51
TNPO3-204ENST00000482320 LAMC1P11047 1609 aa11.88□□□□□ -0.51
TNPO3-204ENST00000482320 FAM50AQ14320 339 aaKnown RBP11.88□□□□□ -0.51
TNPO3-204ENST00000482320 MTUS2Q5JR59 1369 aa11.88□□□□□ -0.51
TNPO3-204ENST00000482320 PLEKHD1A6NEE1 506 aa11.87□□□□□ -0.51
TNPO3-204ENST00000482320 NUP160Q12769 1436 aa11.87□□□□□ -0.51
TNPO3-204ENST00000482320 ADGBQ8N7X0 1667 aa11.87□□□□□ -0.51
TNPO3-204ENST00000482320 TCOF1Q13428 1488 aaKnown RBP11.86□□□□□ -0.51
TNPO3-204ENST00000482320 E9PCH4 1651 aa11.86□□□□□ -0.51
TNPO3-204ENST00000482320 AKNAQ7Z591 1439 aa11.85□□□□□ -0.51
TNPO3-204ENST00000482320 CEP170Q5SW79 1584 aa11.85□□□□□ -0.51
TNPO3-204ENST00000482320 ZNF777Q9ULD5 760 aaPredicted RBP11.85□□□□□ -0.51
TNPO3-204ENST00000482320 CHD1O14646 1710 aa11.83□□□□□ -0.52
TNPO3-204ENST00000482320 SUPT16HQ9Y5B9 1047 aaKnown RBP11.83□□□□□ -0.52
TNPO3-204ENST00000482320 TSHZ2Q9NRE2 1034 aa11.82□□□□□ -0.52
TNPO3-204ENST00000482320 KDM5DQ9BY66 1539 aa11.81□□□□□ -0.52
TNPO3-204ENST00000482320 PLB1Q6P1J6 1458 aa11.79□□□□□ -0.52
TNPO3-204ENST00000482320 MYT1LQ9UL68 1186 aa11.79□□□□□ -0.52
TNPO3-204ENST00000482320 UGGT2Q9NYU1 1516 aa11.78□□□□□ -0.52
TNPO3-204ENST00000482320 DISP1Q96F81 1524 aa11.77□□□□□ -0.53
TNPO3-204ENST00000482320 CASKIN1Q8WXD9 1431 aa11.76□□□□□ -0.53
TNPO3-204ENST00000482320 FYCO1Q9BQS8 1478 aa11.76□□□□□ -0.53
TNPO3-204ENST00000482320 ERICH6Q7L0X2 663 aa11.75□□□□□ -0.53
TNPO3-204ENST00000482320 MAST1Q9Y2H9 1570 aa11.75□□□□□ -0.53
TNPO3-204ENST00000482320 PRKCSHP14314 528 aaPredicted RBP11.73□□□□□ -0.53
TNPO3-204ENST00000482320 FKBP8Q14318 412 aa11.73□□□□□ -0.53
TNPO3-204ENST00000482320 CLSPNQ9HAW4 1339 aa11.73□□□□□ -0.53
TNPO3-204ENST00000482320 MAPKBP1O60336 1514 aa11.73□□□□□ -0.53
TNPO3-204ENST00000482320 CFDP1Q9UEE9 299 aaPredicted RBP11.72□□□□□ -0.53
TNPO3-204ENST00000482320 KIAA0556O60303 1618 aa11.72□□□□□ -0.53
TNPO3-204ENST00000482320 UACAQ9BZF9 1416 aa11.72□□□□□ -0.53
TNPO3-204ENST00000482320 PCF11O94913 1555 aaKnown RBP11.72□□□□□ -0.53
TNPO3-204ENST00000482320 CHIC2Q9UKJ5 165 aa11.72□□□□□ -0.53
TNPO3-204ENST00000482320 ERCC6L2Q5T890 1561 aa11.71□□□□□ -0.53
TNPO3-204ENST00000482320 CDK13Q14004 1512 aaKnown RBP11.71□□□□□ -0.54
TNPO3-204ENST00000482320 CCNB3Q8WWL7 1395 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms