RNA–Protein interactions for RNA: ENST00000482320.5

TNPO3-204, Transcript of transportin 3, humanhuman

TSL 1 (best) BASIC

Gene TNPO3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-204ENST00000482320 NISCHQ9Y2I1 1504 aa17.26■□□□□ 0.35
TNPO3-204ENST00000482320 CCDC180Q9P1Z9 1646 aa15.87■□□□□ 0.13
TNPO3-204ENST00000482320 DCAF1Q9Y4B6 1507 aa15.31■□□□□ 0.04
TNPO3-204ENST00000482320 DCAF8L2P0C7V8 631 aa15.14■□□□□ 0.01
TNPO3-204ENST00000482320 MYO15BQ96JP2 1530 aa15.1■□□□□ 0.01
TNPO3-204ENST00000482320 ZCCHC6Q5VYS8 1495 aaKnown RBP14.85□□□□□ -0.03
TNPO3-204ENST00000482320 ABCC9O60706 1549 aa14.77□□□□□ -0.05
TNPO3-204ENST00000482320 SHROOM4Q9ULL8 1493 aa14.52□□□□□ -0.08
TNPO3-204ENST00000482320 EIF4G1Q04637 1599 aaKnown RBP14.31□□□□□ -0.12
TNPO3-204ENST00000482320 PABPN1Q86U42 306 aaKnown RBP eCLIP14.09□□□□□ -0.153e-6■■□□□ 12.4
TNPO3-204ENST00000482320 NACADO15069 1562 aa14.07□□□□□ -0.16
TNPO3-204ENST00000482320 RB1CC1Q8TDY2 1594 aa14.06□□□□□ -0.16
TNPO3-204ENST00000482320 SCRIBQ14160 1630 aa14.01□□□□□ -0.17
TNPO3-204ENST00000482320 SUPT5HO00267 1087 aaKnown RBP14.01□□□□□ -0.17
TNPO3-204ENST00000482320 UNC13AQ9UPW8 1703 aa13.98□□□□□ -0.17
TNPO3-204ENST00000482320 PEG3Q9GZU2 1588 aa13.96□□□□□ -0.17
TNPO3-204ENST00000482320 PPARGC1BQ86YN6 1023 aaKnown RBP13.73□□□□□ -0.21
TNPO3-204ENST00000482320 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
TNPO3-204ENST00000482320 BAZ1AQ9NRL2 1556 aaPredicted RBP13.61□□□□□ -0.23
TNPO3-204ENST00000482320 PCGF6Q9BYE7 350 aa13.58□□□□□ -0.24
TNPO3-204ENST00000482320 CECR2Q9BXF3 1484 aa13.56□□□□□ -0.24
TNPO3-204ENST00000482320 HRCP23327 699 aa13.51□□□□□ -0.25
TNPO3-204ENST00000482320 BICRAQ9NZM4 1560 aa13.5□□□□□ -0.25
TNPO3-204ENST00000482320 RSF1Q96T23 1441 aaPredicted RBP13.43□□□□□ -0.26
TNPO3-204ENST00000482320 MROH2BQ7Z745 1585 aa13.39□□□□□ -0.27
TNPO3-204ENST00000482320 PELP1Q8IZL8 1130 aaKnown RBP13.36□□□□□ -0.27
TNPO3-204ENST00000482320 SMARCA2P51531 1590 aa13.35□□□□□ -0.27
TNPO3-204ENST00000482320 SMARCA4P51532 1647 aa13.25□□□□□ -0.29
TNPO3-204ENST00000482320 WIZO95785 1651 aa13.24□□□□□ -0.29
TNPO3-204ENST00000482320 BIVM-ERCC5R4GMW8 1640 aa13.22□□□□□ -0.29
TNPO3-204ENST00000482320 TOP2AP11388 1531 aaKnown RBP13.21□□□□□ -0.29
TNPO3-204ENST00000482320 BAZ1BQ9UIG0 1483 aaKnown RBP13.2□□□□□ -0.3
TNPO3-204ENST00000482320 DNAJC5BQ9UF47 199 aa13.2□□□□□ -0.3
TNPO3-204ENST00000482320 ATAD2BQ9ULI0 1458 aa13.19□□□□□ -0.3
TNPO3-204ENST00000482320 EHMT2Q96KQ7 1210 aa13.12□□□□□ -0.31
TNPO3-204ENST00000482320 CC2D2AQ9P2K1 1620 aa13.11□□□□□ -0.31
TNPO3-204ENST00000482320 TRIM41Q8WV44 630 aa13.07□□□□□ -0.32
TNPO3-204ENST00000482320 NCAPD3P42695 1498 aa13.05□□□□□ -0.32
TNPO3-204ENST00000482320 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
TNPO3-204ENST00000482320 CHIC1Q5VXU3 224 aa13.04□□□□□ -0.32
TNPO3-204ENST00000482320 HMGXB3Q12766 1538 aa13.03□□□□□ -0.32
TNPO3-204ENST00000482320 SCAF1Q9H7N4 1312 aaKnown RBP13.02□□□□□ -0.32
TNPO3-204ENST00000482320 WDR97A6NE52 1622 aa13.02□□□□□ -0.32
TNPO3-204ENST00000482320 FAM9AQ8IZU1 332 aaPredicted RBP13.02□□□□□ -0.32
TNPO3-204ENST00000482320 KIF21BO75037 1637 aa12.98□□□□□ -0.33
TNPO3-204ENST00000482320 LOC105371045A0A1W2PR82 267 aa12.97□□□□□ -0.33
TNPO3-204ENST00000482320 MYT1Q01538 1121 aa12.9□□□□□ -0.34
TNPO3-204ENST00000482320 CADPSQ9ULU8 1353 aa12.86□□□□□ -0.35
TNPO3-204ENST00000482320 WRNQ14191 1432 aaPredicted RBP eCLIP12.82□□□□□ -0.363e-7■■■■■ 36.2
TNPO3-204ENST00000482320 NESP48681 1621 aa12.81□□□□□ -0.36
TNPO3-204ENST00000482320 KIF21AQ7Z4S6 1674 aa12.81□□□□□ -0.36
TNPO3-204ENST00000482320 TOP2BQ02880 1626 aa12.77□□□□□ -0.36
TNPO3-204ENST00000482320 ABCC8Q09428 1581 aa12.76□□□□□ -0.37
TNPO3-204ENST00000482320 ERCC6Q03468 1493 aa12.75□□□□□ -0.37
TNPO3-204ENST00000482320 TTBK1Q5TCY1 1321 aaPredicted RBP12.75□□□□□ -0.37
TNPO3-204ENST00000482320 YTHDC1Q96MU7 727 aaKnown RBP12.74□□□□□ -0.37
TNPO3-204ENST00000482320 CFTRP13569 1480 aa12.73□□□□□ -0.37
TNPO3-204ENST00000482320 PDS5BQ9NTI5 1447 aa12.73□□□□□ -0.37
TNPO3-204ENST00000482320 FANCD2Q9BXW9 1451 aa12.7□□□□□ -0.38
TNPO3-204ENST00000482320 GTF3C3Q9Y5Q9 886 aa12.7□□□□□ -0.38
TNPO3-204ENST00000482320 ERICH3Q5RHP9 1530 aa12.7□□□□□ -0.38
TNPO3-204ENST00000482320 TRIM26Q12899 539 aaPredicted RBP12.7□□□□□ -0.38
TNPO3-204ENST00000482320 RANGAP1P46060 587 aaPredicted RBP12.69□□□□□ -0.38
TNPO3-204ENST00000482320 ZEB1P37275 1124 aaPredicted RBP12.68□□□□□ -0.38
TNPO3-204ENST00000482320 NEUROD1Q13562 356 aa12.66□□□□□ -0.38
TNPO3-204ENST00000482320 UBTFP17480 764 aaKnown RBP12.65□□□□□ -0.38
TNPO3-204ENST00000482320 CEP164Q9UPV0 1460 aa12.64□□□□□ -0.39
TNPO3-204ENST00000482320 MAP3K1Q13233 1512 aa12.62□□□□□ -0.39
TNPO3-204ENST00000482320 SYNJ1O43426 1573 aa12.62□□□□□ -0.39
TNPO3-204ENST00000482320 CUX2O14529 1486 aa12.61□□□□□ -0.39
TNPO3-204ENST00000482320 CFAP43Q8NDM7 1665 aa12.61□□□□□ -0.39
TNPO3-204ENST00000482320 CSRNP3Q8WYN3 585 aa12.59□□□□□ -0.39
TNPO3-204ENST00000482320 LAMC3Q9Y6N6 1575 aa12.58□□□□□ -0.39
TNPO3-204ENST00000482320 FBLN2P98095 1184 aa12.56□□□□□ -0.4
TNPO3-204ENST00000482320 SOGA1O94964 1423 aa12.55□□□□□ -0.4
TNPO3-204ENST00000482320 EEA1Q15075 1411 aa12.55□□□□□ -0.4
TNPO3-204ENST00000482320 ACIN1Q9UKV3 1341 aaKnown RBP12.54□□□□□ -0.4
TNPO3-204ENST00000482320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.53□□□□□ -0.4
TNPO3-204ENST00000482320 TDRD9Q8NDG6 1382 aaKnown RBP12.52□□□□□ -0.41
TNPO3-204ENST00000482320 CUX1P39880 1505 aa12.5□□□□□ -0.41
TNPO3-204ENST00000482320 RAD54L2Q9Y4B4 1467 aa12.49□□□□□ -0.41
TNPO3-204ENST00000482320 FGD5Q6ZNL6 1462 aa12.49□□□□□ -0.41
TNPO3-204ENST00000482320 RUSC2Q8N2Y8 1516 aa12.48□□□□□ -0.41
TNPO3-204ENST00000482320 TOPBP1Q92547 1522 aa12.48□□□□□ -0.41
TNPO3-204ENST00000482320 CENPBP07199 599 aaPredicted RBP12.47□□□□□ -0.41
TNPO3-204ENST00000482320 KIF27Q86VH2 1401 aa12.46□□□□□ -0.41
TNPO3-204ENST00000482320 MRC2Q9UBG0 1479 aa12.46□□□□□ -0.41
TNPO3-204ENST00000482320 URB2Q14146 1524 aaKnown RBP12.45□□□□□ -0.42
TNPO3-204ENST00000482320 CCER1Q8TC90 406 aaPredicted RBP12.45□□□□□ -0.42
TNPO3-204ENST00000482320 LRRIQ1Q96JM4 1722 aa12.42□□□□□ -0.42
TNPO3-204ENST00000482320 POLA1P09884 1462 aaPredicted RBP12.42□□□□□ -0.42
TNPO3-204ENST00000482320 CTTNBP2Q8WZ74 1663 aa12.41□□□□□ -0.42
TNPO3-204ENST00000482320 POLR1AO95602 1720 aaPredicted RBP12.41□□□□□ -0.42
TNPO3-204ENST00000482320 ABCA5Q8WWZ7 1642 aa12.4□□□□□ -0.42
TNPO3-204ENST00000482320 DNMBPQ6XZF7 1577 aa12.4□□□□□ -0.42
TNPO3-204ENST00000482320 CHMP7Q8WUX9 453 aaPredicted RBP12.4□□□□□ -0.42
TNPO3-204ENST00000482320 THOC2Q8NI27 1593 aaKnown RBP12.39□□□□□ -0.43
TNPO3-204ENST00000482320 ATP1B4Q9UN42 357 aaPredicted RBP12.38□□□□□ -0.43
TNPO3-204ENST00000482320 AQRO60306 1485 aaKnown RBP eCLIP12.38□□□□□ -0.434e-7■■■■□ 25.8
TNPO3-204ENST00000482320 SAMD9Q5K651 1589 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms