RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 CTTNBP2Q8WZ74 1663 aa15.22■□□□□ 0.03
RAD51B-208ENST00000479335 PPARGC1BQ86YN6 1023 aaKnown RBP15.22■□□□□ 0.03
RAD51B-208ENST00000479335 AQRO60306 1485 aaKnown RBP eCLIP15.21■□□□□ 0.03
RAD51B-208ENST00000479335 EFCAB5A4FU69 1503 aa15.2■□□□□ 0.02
RAD51B-208ENST00000479335 HRCP23327 699 aa15.18■□□□□ 0.02
RAD51B-208ENST00000479335 ADAMTS12P58397 1594 aa15.17■□□□□ 0.02
RAD51B-208ENST00000479335 ZNF608Q9ULD9 1512 aaPredicted RBP15.16■□□□□ 0.02
RAD51B-208ENST00000479335 PLPPR3Q6T4P5 718 aa15.14■□□□□ 0.01
RAD51B-208ENST00000479335 MAP3K1Q13233 1512 aa15.14■□□□□ 0.01
RAD51B-208ENST00000479335 EIF4G3O43432 1585 aaKnown RBP15.12■□□□□ 0.01
RAD51B-208ENST00000479335 MAGI1Q96QZ7 1491 aaPredicted RBP15.1■□□□□ 0.01
RAD51B-208ENST00000479335 SAMD9Q5K651 1589 aa15.09■□□□□ 0.01
RAD51B-208ENST00000479335 FMN1Q68DA7 1419 aa15.07■□□□□ 0
RAD51B-208ENST00000479335 SNAPC4Q5SXM2 1469 aa15.07■□□□□ 0
RAD51B-208ENST00000479335 IQGAP2Q13576 1575 aa15.05■□□□□ -0
RAD51B-208ENST00000479335 CASKIN1Q8WXD9 1431 aa15.04■□□□□ -0
RAD51B-208ENST00000479335 TTBK1Q5TCY1 1321 aaPredicted RBP15.04■□□□□ -0
RAD51B-208ENST00000479335 FHOD3Q2V2M9 1422 aa15.04■□□□□ -0
RAD51B-208ENST00000479335 GRIN2AQ12879 1464 aa15.04■□□□□ -0
RAD51B-208ENST00000479335 FYCO1Q9BQS8 1478 aa15.04■□□□□ -0
RAD51B-208ENST00000479335 KIAA0586Q9BVV6 1533 aa15.04■□□□□ -0
RAD51B-208ENST00000479335 ZEB1P37275 1124 aaPredicted RBP15.03■□□□□ -0
RAD51B-208ENST00000479335 SYNJ2O15056 1496 aa15.03■□□□□ -0
RAD51B-208ENST00000479335 TIAM1Q13009 1591 aa15.03■□□□□ -0
RAD51B-208ENST00000479335 P3H3Q8IVL6 736 aa15.02□□□□□ -0.01
RAD51B-208ENST00000479335 KANK4Q5T7N3 995 aaPredicted RBP15.01□□□□□ -0.01
RAD51B-208ENST00000479335 UGGT2Q9NYU1 1516 aa15.01□□□□□ -0.01
RAD51B-208ENST00000479335 PCF11O94913 1555 aaKnown RBP14.99□□□□□ -0.01
RAD51B-208ENST00000479335 CHMP7Q8WUX9 453 aaPredicted RBP14.99□□□□□ -0.01
RAD51B-208ENST00000479335 CFAP43Q8NDM7 1665 aa14.98□□□□□ -0.01
RAD51B-208ENST00000479335 LRRC9Q6ZRR7 1453 aa14.97□□□□□ -0.01
RAD51B-208ENST00000479335 RRBP1Q9P2E9 1410 aaKnown RBP14.95□□□□□ -0.02
RAD51B-208ENST00000479335 NUP160Q12769 1436 aa14.94□□□□□ -0.02
RAD51B-208ENST00000479335 CEP170Q5SW79 1584 aa14.9□□□□□ -0.02
RAD51B-208ENST00000479335 ATP1B4Q9UN42 357 aaPredicted RBP14.89□□□□□ -0.03
RAD51B-208ENST00000479335 DISP1Q96F81 1524 aa14.88□□□□□ -0.03
RAD51B-208ENST00000479335 CCDC18Q5T9S5 1454 aa14.88□□□□□ -0.03
RAD51B-208ENST00000479335 KIAA0556O60303 1618 aa14.88□□□□□ -0.03
RAD51B-208ENST00000479335 CCNB3Q8WWL7 1395 aa14.87□□□□□ -0.03
RAD51B-208ENST00000479335 FBLN2P98095 1184 aa14.87□□□□□ -0.03
RAD51B-208ENST00000479335 HECW1Q76N89 1606 aa14.86□□□□□ -0.03
RAD51B-208ENST00000479335 JPH4Q96JJ6 628 aa14.84□□□□□ -0.03
RAD51B-208ENST00000479335 CARMIL2Q6F5E8 1435 aa14.84□□□□□ -0.03
RAD51B-208ENST00000479335 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
RAD51B-208ENST00000479335 CCER1Q8TC90 406 aaPredicted RBP14.83□□□□□ -0.04
RAD51B-208ENST00000479335 LRRIQ1Q96JM4 1722 aa14.83□□□□□ -0.04
RAD51B-208ENST00000479335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
RAD51B-208ENST00000479335 MTUS2Q5JR59 1369 aa14.82□□□□□ -0.04
RAD51B-208ENST00000479335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.82□□□□□ -0.04
RAD51B-208ENST00000479335 FOXD1Q16676 465 aa14.81□□□□□ -0.04
RAD51B-208ENST00000479335 PHLDB1Q86UU1 1377 aa14.81□□□□□ -0.04
RAD51B-208ENST00000479335 EHBP1L1Q8N3D4 1523 aa14.81□□□□□ -0.04
RAD51B-208ENST00000479335 EPRSP07814 1512 aaKnown RBP14.8□□□□□ -0.04
RAD51B-208ENST00000479335 SUPT6HQ7KZ85 1726 aaKnown RBP14.77□□□□□ -0.05
RAD51B-208ENST00000479335 RAPGEF6Q8TEU7 1601 aa14.76□□□□□ -0.05
RAD51B-208ENST00000479335 CHD1O14646 1710 aa14.76□□□□□ -0.05
RAD51B-208ENST00000479335 ARHGEF11O15085 1522 aa14.74□□□□□ -0.05
RAD51B-208ENST00000479335 NCOA2Q15596 1464 aa14.74□□□□□ -0.05
RAD51B-208ENST00000479335 CDK11AQ9UQ88 783 aaPredicted RBP14.73□□□□□ -0.05
RAD51B-208ENST00000479335 NUP153P49790 1475 aaKnown RBP14.72□□□□□ -0.05
RAD51B-208ENST00000479335 FGD6Q6ZV73 1430 aa14.72□□□□□ -0.05
RAD51B-208ENST00000479335 MYOM3Q5VTT5 1437 aa14.71□□□□□ -0.05
RAD51B-208ENST00000479335 MAGI3Q5TCQ9 1506 aa14.71□□□□□ -0.06
RAD51B-208ENST00000479335 SHROOM2Q13796 1616 aa14.71□□□□□ -0.06
RAD51B-208ENST00000479335 CLSPNQ9HAW4 1339 aa14.7□□□□□ -0.06
RAD51B-208ENST00000479335 CDK13Q14004 1512 aaKnown RBP14.69□□□□□ -0.06
RAD51B-208ENST00000479335 PRG4Q92954 1404 aaPredicted RBP14.69□□□□□ -0.06
RAD51B-208ENST00000479335 FAM50AQ14320 339 aaKnown RBP14.68□□□□□ -0.06
RAD51B-208ENST00000479335 ABCA8O94911 1581 aa14.68□□□□□ -0.06
RAD51B-208ENST00000479335 MIA2Q96PC5 1412 aa14.67□□□□□ -0.06
RAD51B-208ENST00000479335 PLB1Q6P1J6 1458 aa14.66□□□□□ -0.06
RAD51B-208ENST00000479335 PTPRGP23470 1445 aa14.65□□□□□ -0.06
RAD51B-208ENST00000479335 SETD5Q9C0A6 1442 aa14.64□□□□□ -0.07
RAD51B-208ENST00000479335 TCOF1Q13428 1488 aaKnown RBP14.64□□□□□ -0.07
RAD51B-208ENST00000479335 CLASP1Q7Z460 1538 aa14.64□□□□□ -0.07
RAD51B-208ENST00000479335 TROQ12816 1431 aaPredicted RBP14.63□□□□□ -0.07
RAD51B-208ENST00000479335 ITGAEP38570 1179 aa14.63□□□□□ -0.07
RAD51B-208ENST00000479335 PTPN23Q9H3S7 1636 aa14.61□□□□□ -0.07
RAD51B-208ENST00000479335 DHX57Q6P158 1386 aaKnown RBP14.61□□□□□ -0.07
RAD51B-208ENST00000479335 ADCY10Q96PN6 1610 aa14.6□□□□□ -0.07
RAD51B-208ENST00000479335 ATP10BO94823 1461 aa14.59□□□□□ -0.07
RAD51B-208ENST00000479335 RAB3GAP2Q9H2M9 1393 aa14.59□□□□□ -0.07
RAD51B-208ENST00000479335 PLEKHD1A6NEE1 506 aa14.58□□□□□ -0.08
RAD51B-208ENST00000479335 UACAQ9BZF9 1416 aa14.57□□□□□ -0.08
RAD51B-208ENST00000479335 ARID3CA6NKF2 412 aa14.57□□□□□ -0.08
RAD51B-208ENST00000479335 HFM1A2PYH4 1435 aa14.54□□□□□ -0.08
RAD51B-208ENST00000479335 ITSN2Q9NZM3 1697 aa14.53□□□□□ -0.08
RAD51B-208ENST00000479335 ACIN1Q9UKV3 1341 aaKnown RBP14.53□□□□□ -0.08
RAD51B-208ENST00000479335 PTPRKQ15262 1439 aa14.52□□□□□ -0.08
RAD51B-208ENST00000479335 AKNAQ7Z591 1439 aa14.52□□□□□ -0.08
RAD51B-208ENST00000479335 ABCC2Q92887 1545 aa14.52□□□□□ -0.09
RAD51B-208ENST00000479335 UHRF1BP1LA0JNW5 1464 aa14.51□□□□□ -0.09
RAD51B-208ENST00000479335 ERCC6L2Q5T890 1561 aa14.51□□□□□ -0.09
RAD51B-208ENST00000479335 GPATCH8Q9UKJ3 1502 aaKnown RBP14.5□□□□□ -0.09
RAD51B-208ENST00000479335 KIF14Q15058 1648 aa14.5□□□□□ -0.09
RAD51B-208ENST00000479335 ABCC10Q5T3U5 1492 aa14.49□□□□□ -0.09
RAD51B-208ENST00000479335 NAIPQ13075 1403 aa14.48□□□□□ -0.09
RAD51B-208ENST00000479335 CFDP1Q9UEE9 299 aaPredicted RBP14.48□□□□□ -0.09
RAD51B-208ENST00000479335 ROCK1Q13464 1354 aa14.47□□□□□ -0.09
RAD51B-208ENST00000479335 DNMT1P26358 1616 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms