RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 SNAPC4Q5SXM2 1469 aa42.17■■■■■ 4.34
CHKB-208ENST00000479003 CTTNBP2Q8WZ74 1663 aa42.13■■■■■ 4.34
CHKB-208ENST00000479003 ARHGAP35Q9NRY4 1499 aa42.07■■■■■ 4.33
CHKB-208ENST00000479003 ARAP1Q96P48 1450 aa42.06■■■■■ 4.32
CHKB-208ENST00000479003 MAGI1Q96QZ7 1491 aaPredicted RBP42.03■■■■■ 4.32
CHKB-208ENST00000479003 VPS8Q8N3P4 1428 aa42.02■■■■■ 4.32
CHKB-208ENST00000479003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.01■■■■■ 4.32
CHKB-208ENST00000479003 TTBK1Q5TCY1 1321 aaPredicted RBP41.96■■■■■ 4.31
CHKB-208ENST00000479003 CCER1Q8TC90 406 aaPredicted RBP41.95■■■■■ 4.31
CHKB-208ENST00000479003 GRIN2AQ12879 1464 aa41.9■■■■■ 4.3
CHKB-208ENST00000479003 SYNJ2O15056 1496 aa41.89■■■■■ 4.3
CHKB-208ENST00000479003 CHMP7Q8WUX9 453 aaPredicted RBP41.8■■■■■ 4.28
CHKB-208ENST00000479003 EFCAB5A4FU69 1503 aa41.79■■■■■ 4.28
CHKB-208ENST00000479003 IQGAP2Q13576 1575 aa41.76■■■■■ 4.28
CHKB-208ENST00000479003 FBLN2P98095 1184 aa41.75■■■■■ 4.27
CHKB-208ENST00000479003 P3H3Q8IVL6 736 aa41.75■■■■■ 4.27
CHKB-208ENST00000479003 FHOD3Q2V2M9 1422 aa41.7■■■■■ 4.27
CHKB-208ENST00000479003 SAMD9Q5K651 1589 aa41.69■■■■■ 4.27
CHKB-208ENST00000479003 CEP170Q5SW79 1584 aa41.67■■■■■ 4.26
CHKB-208ENST00000479003 KIAA0586Q9BVV6 1533 aa41.66■■■■■ 4.26
CHKB-208ENST00000479003 NUP160Q12769 1436 aa41.58■■■■■ 4.25
CHKB-208ENST00000479003 APLP2Q06481 763 aa41.54■■■■■ 4.24
CHKB-208ENST00000479003 UGGT2Q9NYU1 1516 aa41.53■■■■■ 4.24
CHKB-208ENST00000479003 CHD1O14646 1710 aa41.51■■■■■ 4.24
CHKB-208ENST00000479003 PCF11O94913 1555 aaKnown RBP41.48■■■■■ 4.23
CHKB-208ENST00000479003 FMN1Q68DA7 1419 aa41.42■■■■■ 4.22
CHKB-208ENST00000479003 DISP1Q96F81 1524 aa41.38■■■■■ 4.21
CHKB-208ENST00000479003 KIAA0556O60303 1618 aa41.35■■■■■ 4.21
CHKB-208ENST00000479003 CASKIN1Q8WXD9 1431 aa41.34■■■■■ 4.21
CHKB-208ENST00000479003 FYCO1Q9BQS8 1478 aa41.34■■■■■ 4.21
CHKB-208ENST00000479003 KANK4Q5T7N3 995 aaPredicted RBP41.31■■■■■ 4.2
CHKB-208ENST00000479003 TIAM1Q13009 1591 aa41.28■■■■■ 4.2
CHKB-208ENST00000479003 JPH4Q96JJ6 628 aa41.26■■■■■ 4.2
CHKB-208ENST00000479003 ATP1B4Q9UN42 357 aaPredicted RBP41.26■■■■■ 4.2
CHKB-208ENST00000479003 MAP3K1Q13233 1512 aa41.23■■■■■ 4.19
CHKB-208ENST00000479003 HNRNPUL2Q1KMD3 747 aaKnown RBP41.23■■■■■ 4.19
CHKB-208ENST00000479003 CFAP43Q8NDM7 1665 aa41.19■■■■■ 4.18
CHKB-208ENST00000479003 LRRIQ1Q96JM4 1722 aa41.13■■■■■ 4.17
CHKB-208ENST00000479003 CARMIL2Q6F5E8 1435 aa41.11■■■■■ 4.17
CHKB-208ENST00000479003 LRRC9Q6ZRR7 1453 aa41.08■■■■■ 4.17
CHKB-208ENST00000479003 PELP1Q8IZL8 1130 aaKnown RBP41.03■■■■■ 4.16
CHKB-208ENST00000479003 PRG4Q92954 1404 aaPredicted RBP41.03■■■■■ 4.16
CHKB-208ENST00000479003 SHROOM2Q13796 1616 aa41.02■■■■■ 4.16
CHKB-208ENST00000479003 HECW1Q76N89 1606 aa41.02■■■■■ 4.16
CHKB-208ENST00000479003 CLASP1Q7Z460 1538 aa41■■■■■ 4.15
CHKB-208ENST00000479003 DIEXFQ68CQ4 756 aaKnown RBP40.99■■■■■ 4.15
CHKB-208ENST00000479003 RAPGEF6Q8TEU7 1601 aa40.92■■■■■ 4.14
CHKB-208ENST00000479003 CCDC18Q5T9S5 1454 aa40.9■■■■■ 4.14
CHKB-208ENST00000479003 EPRSP07814 1512 aaKnown RBP40.9■■■■■ 4.14
CHKB-208ENST00000479003 RRBP1Q9P2E9 1410 aaKnown RBP40.89■■■■■ 4.14
CHKB-208ENST00000479003 PLB1Q6P1J6 1458 aa40.88■■■■■ 4.13
CHKB-208ENST00000479003 ZNF316A6NFI3 1004 aaPredicted RBP40.86■■■■■ 4.13
CHKB-208ENST00000479003 NUP153P49790 1475 aaKnown RBP40.86■■■■■ 4.13
CHKB-208ENST00000479003 CDK13Q14004 1512 aaKnown RBP40.86■■■■■ 4.13
CHKB-208ENST00000479003 ERCC6L2Q5T890 1561 aa40.84■■■■■ 4.13
CHKB-208ENST00000479003 ARID3CA6NKF2 412 aa40.84■■■■■ 4.13
CHKB-208ENST00000479003 MTUS2Q5JR59 1369 aa40.8■■■■■ 4.12
CHKB-208ENST00000479003 MAGI3Q5TCQ9 1506 aa40.78■■■■■ 4.12
CHKB-208ENST00000479003 PHLDB1Q86UU1 1377 aa40.75■■■■■ 4.11
CHKB-208ENST00000479003 PTPRGP23470 1445 aa40.74■■■■■ 4.11
CHKB-208ENST00000479003 ABCA8O94911 1581 aa40.74■■■■■ 4.11
CHKB-208ENST00000479003 EHBP1L1Q8N3D4 1523 aa40.72■■■■■ 4.11
CHKB-208ENST00000479003 CLSPNQ9HAW4 1339 aa40.7■■■■■ 4.11
CHKB-208ENST00000479003 CCNB3Q8WWL7 1395 aa40.64■■■■■ 4.1
CHKB-208ENST00000479003 DHX57Q6P158 1386 aaKnown RBP40.63■■■■■ 4.09
CHKB-208ENST00000479003 SCAF1Q9H7N4 1312 aaKnown RBP40.62■■■■■ 4.09
CHKB-208ENST00000479003 OSCARQ8IYS5 282 aa40.61■■■■■ 4.09
CHKB-208ENST00000479003 SUPT6HQ7KZ85 1726 aaKnown RBP40.61■■■■■ 4.09
CHKB-208ENST00000479003 NCOA2Q15596 1464 aa40.6■■■■■ 4.09
CHKB-208ENST00000479003 ARHGEF11O15085 1522 aa40.52■■■■■ 4.08
CHKB-208ENST00000479003 UACAQ9BZF9 1416 aa40.51■■■■■ 4.08
CHKB-208ENST00000479003 ATP10BO94823 1461 aa40.49■■■■■ 4.07
CHKB-208ENST00000479003 ACIN1Q9UKV3 1341 aaKnown RBP40.48■■■■■ 4.07
CHKB-208ENST00000479003 CDK11AQ9UQ88 783 aaPredicted RBP40.45■■■■■ 4.07
CHKB-208ENST00000479003 FGD6Q6ZV73 1430 aa40.42■■■■■ 4.06
CHKB-208ENST00000479003 MYOM3Q5VTT5 1437 aa40.42■■■■■ 4.06
CHKB-208ENST00000479003 ABCC2Q92887 1545 aa40.4■■■■■ 4.06
CHKB-208ENST00000479003 TROQ12816 1431 aaPredicted RBP40.39■■■■■ 4.06
CHKB-208ENST00000479003 FAM50AQ14320 339 aaKnown RBP40.36■■■■■ 4.05
CHKB-208ENST00000479003 NEUROD1Q13562 356 aa40.35■■■■■ 4.05
CHKB-208ENST00000479003 CENPBP07199 599 aaPredicted RBP40.34■■■■■ 4.05
CHKB-208ENST00000479003 ITGAEP38570 1179 aa40.31■■■■■ 4.04
CHKB-208ENST00000479003 KIF14Q15058 1648 aa40.29■■■■■ 4.04
CHKB-208ENST00000479003 ADCY10Q96PN6 1610 aa40.27■■■■■ 4.04
CHKB-208ENST00000479003 PLEKHD1A6NEE1 506 aa40.26■■■■■ 4.04
CHKB-208ENST00000479003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP40.25■■■■■ 4.03
CHKB-208ENST00000479003 UHRF1BP1LA0JNW5 1464 aa40.25■■■■■ 4.03
CHKB-208ENST00000479003 PTPN23Q9H3S7 1636 aa40.22■■■■■ 4.03
CHKB-208ENST00000479003 RAB3GAP2Q9H2M9 1393 aa40.17■■■■■ 4.02
CHKB-208ENST00000479003 ZCCHC11Q5TAX3 1644 aaKnown RBP40.15■■■■■ 4.02
CHKB-208ENST00000479003 MIA2Q96PC5 1412 aa40.15■■■■■ 4.02
CHKB-208ENST00000479003 KDM5BQ9UGL1 1544 aa40.14■■■■■ 4.02
CHKB-208ENST00000479003 TCOF1Q13428 1488 aaKnown RBP40.13■■■■■ 4.01
CHKB-208ENST00000479003 MIER1Q8N108 512 aa40.11■■■■■ 4.01
CHKB-208ENST00000479003 SETD5Q9C0A6 1442 aa40.1■■■■■ 4.01
CHKB-208ENST00000479003 ABCC10Q5T3U5 1492 aa40.08■■■■■ 4.01
CHKB-208ENST00000479003 GPATCH8Q9UKJ3 1502 aaKnown RBP40.07■■■■■ 4
CHKB-208ENST00000479003 ITSN2Q9NZM3 1697 aa40.04■■■■■ 4
CHKB-208ENST00000479003 MAPKBP1O60336 1514 aa40.04■■■■■ 4
CHKB-208ENST00000479003 PTPRKQ15262 1439 aa40.02■■■■■ 4
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms