RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 JPH4Q96JJ6 628 aa29.48■■■□□ 2.31
SREBF1-211ENST00000476994 CUL7Q14999 1698 aa29.46■■■□□ 2.31
SREBF1-211ENST00000476994 EEA1Q15075 1411 aa29.42■■■□□ 2.3
SREBF1-211ENST00000476994 IGF1RP08069 1367 aa29.35■■■□□ 2.29
SREBF1-211ENST00000476994 KIAA0586Q9BVV6 1533 aa29.31■■■□□ 2.28
SREBF1-211ENST00000476994 NPM1P06748 294 aaKnown RBP eCLIP29.3■■■□□ 2.28
SREBF1-211ENST00000476994 KIF13AQ9H1H9 1805 aa29.27■■■□□ 2.28
SREBF1-211ENST00000476994 FAM9AQ8IZU1 332 aaPredicted RBP29.22■■■□□ 2.27
SREBF1-211ENST00000476994 CSRNP3Q8WYN3 585 aa29.22■■■□□ 2.27
SREBF1-211ENST00000476994 CARMIL1Q5VZK9 1371 aa29.22■■■□□ 2.27
SREBF1-211ENST00000476994 PRXQ9BXM0 1461 aa29.21■■■□□ 2.27
SREBF1-211ENST00000476994 KIF21BO75037 1637 aa29.17■■■□□ 2.26
SREBF1-211ENST00000476994 AEBP2Q6ZN18 517 aaPredicted RBP29.15■■■□□ 2.26
SREBF1-211ENST00000476994 ADCY10Q96PN6 1610 aa29.15■■■□□ 2.26
SREBF1-211ENST00000476994 MAPKBP1O60336 1514 aa29.14■■■□□ 2.25
SREBF1-211ENST00000476994 CARMIL2Q6F5E8 1435 aa29.11■■■□□ 2.25
SREBF1-211ENST00000476994 FAM69CQ0P6D2 419 aa29.09■■■□□ 2.25
SREBF1-211ENST00000476994 ABCC10Q5T3U5 1492 aa29.09■■■□□ 2.25
SREBF1-211ENST00000476994 IQGAP2Q13576 1575 aa29.09■■■□□ 2.25
SREBF1-211ENST00000476994 RAPGEF2Q9Y4G8 1499 aa29.08■■■□□ 2.25
SREBF1-211ENST00000476994 PTPRGP23470 1445 aa29.05■■■□□ 2.24
SREBF1-211ENST00000476994 DIP2BQ9P265 1576 aa29.03■■■□□ 2.24
SREBF1-211ENST00000476994 TTBK1Q5TCY1 1321 aaPredicted RBP29.01■■■□□ 2.23
SREBF1-211ENST00000476994 TNIKQ9UKE5 1360 aa29.01■■■□□ 2.23
SREBF1-211ENST00000476994 GOLGA3Q08378 1498 aa28.96■■■□□ 2.23
SREBF1-211ENST00000476994 TSPOAP1O95153 1857 aa28.94■■■□□ 2.22
SREBF1-211ENST00000476994 CTTNBP2Q8WZ74 1663 aa28.93■■■□□ 2.22
SREBF1-211ENST00000476994 ABCC2Q92887 1545 aa28.89■■■□□ 2.22
SREBF1-211ENST00000476994 UGGT2Q9NYU1 1516 aa28.85■■■□□ 2.21
SREBF1-211ENST00000476994 DISP1Q96F81 1524 aa28.84■■■□□ 2.21
SREBF1-211ENST00000476994 KDM6BO15054 1643 aa28.84■■■□□ 2.21
SREBF1-211ENST00000476994 UACAQ9BZF9 1416 aa28.83■■■□□ 2.21
SREBF1-211ENST00000476994 UHRF1BP1LA0JNW5 1464 aa28.83■■■□□ 2.21
SREBF1-211ENST00000476994 PLB1Q6P1J6 1458 aa28.81■■■□□ 2.2
SREBF1-211ENST00000476994 KIAA0556O60303 1618 aa28.8■■■□□ 2.2
SREBF1-211ENST00000476994 ASXL2Q76L83 1435 aa28.77■■■□□ 2.2
SREBF1-211ENST00000476994 LOC105371045A0A1W2PR82 267 aa28.77■■■□□ 2.2
SREBF1-211ENST00000476994 EHMT2Q96KQ7 1210 aa28.75■■■□□ 2.19
SREBF1-211ENST00000476994 GLI2P10070 1586 aa28.73■■■□□ 2.19
SREBF1-211ENST00000476994 KDM5BQ9UGL1 1544 aa28.69■■■□□ 2.18
SREBF1-211ENST00000476994 ZCCHC11Q5TAX3 1644 aaKnown RBP28.69■■■□□ 2.18
SREBF1-211ENST00000476994 UBTFP17480 764 aaKnown RBP28.67■■■□□ 2.18
SREBF1-211ENST00000476994 PPRC1Q5VV67 1664 aaKnown RBP28.61■■■□□ 2.17
SREBF1-211ENST00000476994 EPRSP07814 1512 aaKnown RBP28.59■■■□□ 2.17
SREBF1-211ENST00000476994 MAP3K4Q9Y6R4 1608 aa28.58■■■□□ 2.17
SREBF1-211ENST00000476994 SAMD9Q5K651 1589 aa28.56■■■□□ 2.16
SREBF1-211ENST00000476994 TEX14Q8IWB6 1497 aa28.56■■■□□ 2.16
SREBF1-211ENST00000476994 WDR7Q9Y4E6 1490 aa28.53■■■□□ 2.16
SREBF1-211ENST00000476994 ABCA8O94911 1581 aa28.5■■■□□ 2.15
SREBF1-211ENST00000476994 CEP162Q5TB80 1403 aa28.49■■■□□ 2.15
SREBF1-211ENST00000476994 EFCAB5A4FU69 1503 aa28.48■■■□□ 2.15
SREBF1-211ENST00000476994 ARHGAP35Q9NRY4 1499 aa28.46■■■□□ 2.15
SREBF1-211ENST00000476994 CFAP43Q8NDM7 1665 aa28.44■■■□□ 2.14
SREBF1-211ENST00000476994 CLIP1P30622 1438 aa28.43■■■□□ 2.14
SREBF1-211ENST00000476994 KCNH8Q96L42 1107 aa28.39■■■□□ 2.14
SREBF1-211ENST00000476994 KDM4FA0A1W2PPD8 638 aa28.38■■■□□ 2.13
SREBF1-211ENST00000476994 CD109Q6YHK3 1445 aa28.35■■■□□ 2.13
SREBF1-211ENST00000476994 P3H3Q8IVL6 736 aa28.35■■■□□ 2.13
SREBF1-211ENST00000476994 RANGAP1P46060 587 aaPredicted RBP28.34■■■□□ 2.13
SREBF1-211ENST00000476994 COL17A1Q9UMD9 1497 aaPredicted RBP28.32■■■□□ 2.12
SREBF1-211ENST00000476994 MAGI3Q5TCQ9 1506 aa28.32■■■□□ 2.12
SREBF1-211ENST00000476994 FHOD3Q2V2M9 1422 aa28.31■■■□□ 2.12
SREBF1-211ENST00000476994 RAPGEF6Q8TEU7 1601 aa28.27■■■□□ 2.12
SREBF1-211ENST00000476994 ARID3CA6NKF2 412 aa28.26■■■□□ 2.11
SREBF1-211ENST00000476994 ADGRL1O94910 1474 aa28.26■■■□□ 2.11
SREBF1-211ENST00000476994 ATP10BO94823 1461 aa28.24■■■□□ 2.11
SREBF1-211ENST00000476994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.21■■■□□ 2.11
SREBF1-211ENST00000476994 HNRNPUL2Q1KMD3 747 aaKnown RBP28.21■■■□□ 2.11
SREBF1-211ENST00000476994 ABCA9Q8IUA7 1624 aa28.16■■■□□ 2.1
SREBF1-211ENST00000476994 FMN1Q68DA7 1419 aa28.13■■■□□ 2.09
SREBF1-211ENST00000476994 PCF11O94913 1555 aaKnown RBP28.12■■■□□ 2.09
SREBF1-211ENST00000476994 VPS8Q8N3P4 1428 aa28.11■■■□□ 2.09
SREBF1-211ENST00000476994 PHLDB1Q86UU1 1377 aa28.11■■■□□ 2.09
SREBF1-211ENST00000476994 ARAP3Q8WWN8 1544 aa28.1■■■□□ 2.09
SREBF1-211ENST00000476994 LRRIQ1Q96JM4 1722 aa28.08■■■□□ 2.09
SREBF1-211ENST00000476994 NUP153P49790 1475 aaKnown RBP28.07■■■□□ 2.08
SREBF1-211ENST00000476994 CASKIN1Q8WXD9 1431 aa28.03■■■□□ 2.08
SREBF1-211ENST00000476994 PLEKHD1A6NEE1 506 aa28.02■■■□□ 2.08
SREBF1-211ENST00000476994 NEO1Q92859 1461 aa28.02■■■□□ 2.08
SREBF1-211ENST00000476994 FYCO1Q9BQS8 1478 aa28.02■■■□□ 2.08
SREBF1-211ENST00000476994 HECW1Q76N89 1606 aa28.01■■■□□ 2.07
SREBF1-211ENST00000476994 CFAP74Q9C0B2 1584 aa27.93■■■□□ 2.06
SREBF1-211ENST00000476994 RAPGEF3O95398 923 aa27.9■■■□□ 2.06
SREBF1-211ENST00000476994 HECW2Q9P2P5 1572 aa27.88■■■□□ 2.05
SREBF1-211ENST00000476994 CDK13Q14004 1512 aaKnown RBP27.86■■■□□ 2.05
SREBF1-211ENST00000476994 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.84■■■□□ 2.052e-6■□□□□ 9.2
SREBF1-211ENST00000476994 CCDC18Q5T9S5 1454 aa27.83■■■□□ 2.05
SREBF1-211ENST00000476994 ATP1B4Q9UN42 357 aaPredicted RBP27.83■■■□□ 2.05
SREBF1-211ENST00000476994 FANCAO15360 1455 aa27.83■■■□□ 2.04
SREBF1-211ENST00000476994 MAP3K1Q13233 1512 aa27.82■■■□□ 2.04
SREBF1-211ENST00000476994 TIAM1Q13009 1591 aa27.82■■■□□ 2.04
SREBF1-211ENST00000476994 DENND4BO75064 1496 aaPredicted RBP27.82■■■□□ 2.04
SREBF1-211ENST00000476994 FRMPD1Q5SYB0 1578 aa27.82■■■□□ 2.04
SREBF1-211ENST00000476994 AKNAQ7Z591 1439 aa27.81■■■□□ 2.04
SREBF1-211ENST00000476994 TTC37Q6PGP7 1564 aa27.81■■■□□ 2.04
SREBF1-211ENST00000476994 RICTORQ6R327 1708 aa27.8■■■□□ 2.04
SREBF1-211ENST00000476994 ARID4BQ4LE39 1312 aaPredicted RBP27.79■■■□□ 2.04
SREBF1-211ENST00000476994 CDK11AQ9UQ88 783 aaPredicted RBP27.78■■■□□ 2.04
SREBF1-211ENST00000476994 ADAMTSL3P82987 1691 aa27.77■■■□□ 2.04
SREBF1-211ENST00000476994 ARHGEF40Q8TER5 1519 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms