RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 CHMP7Q8WUX9 453 aaPredicted RBP21.71■■□□□ 1.07
NELFCD-204ENST00000474543 ERICH3Q5RHP9 1530 aa21.7■■□□□ 1.07
NELFCD-204ENST00000474543 CLIP1P30622 1438 aa21.7■■□□□ 1.06
NELFCD-204ENST00000474543 NEUROD1Q13562 356 aa21.7■■□□□ 1.06
NELFCD-204ENST00000474543 OSCARQ8IYS5 282 aa21.69■■□□□ 1.06
NELFCD-204ENST00000474543 CHD1O14646 1710 aa21.68■■□□□ 1.06
NELFCD-204ENST00000474543 SYNJ2O15056 1496 aa21.67■■□□□ 1.06
NELFCD-204ENST00000474543 IGF1RP08069 1367 aa21.64■■□□□ 1.06
NELFCD-204ENST00000474543 VPS8Q8N3P4 1428 aa21.64■■□□□ 1.05
NELFCD-204ENST00000474543 ADAMTS12P58397 1594 aa21.63■■□□□ 1.05
NELFCD-204ENST00000474543 FHAD1B1AJZ9 1412 aa21.63■■□□□ 1.05
NELFCD-204ENST00000474543 RAPGEF2Q9Y4G8 1499 aa21.62■■□□□ 1.05
NELFCD-204ENST00000474543 DNAJC5Q9H3Z4 198 aa21.62■■□□□ 1.05
NELFCD-204ENST00000474543 ZNF316A6NFI3 1004 aaPredicted RBP21.62■■□□□ 1.05
NELFCD-204ENST00000474543 CENPBP07199 599 aaPredicted RBP21.58■■□□□ 1.05
NELFCD-204ENST00000474543 HNRNPUL2Q1KMD3 747 aaKnown RBP21.57■■□□□ 1.04
NELFCD-204ENST00000474543 CUL7Q14999 1698 aa21.55■■□□□ 1.04
NELFCD-204ENST00000474543 GRIN2AQ12879 1464 aa21.55■■□□□ 1.04
NELFCD-204ENST00000474543 CARMIL1Q5VZK9 1371 aa21.53■■□□□ 1.04
NELFCD-204ENST00000474543 APLP2Q06481 763 aa21.51■■□□□ 1.03
NELFCD-204ENST00000474543 GTF3C3Q9Y5Q9 886 aa21.49■■□□□ 1.03
NELFCD-204ENST00000474543 RANGAP1P46060 587 aaPredicted RBP21.44■■□□□ 1.02
NELFCD-204ENST00000474543 NUP160Q12769 1436 aa21.43■■□□□ 1.02
NELFCD-204ENST00000474543 CEP170Q5SW79 1584 aa21.43■■□□□ 1.02
NELFCD-204ENST00000474543 CLASP1Q7Z460 1538 aa21.41■■□□□ 1.02
NELFCD-204ENST00000474543 PRXQ9BXM0 1461 aa21.41■■□□□ 1.02
NELFCD-204ENST00000474543 ARAP1Q96P48 1450 aa21.35■■□□□ 1.01
NELFCD-204ENST00000474543 MIER1Q8N108 512 aa21.32■■□□□ 1
NELFCD-204ENST00000474543 ARHGEF11O15085 1522 aa21.29■■□□□ 1
NELFCD-204ENST00000474543 KIAA0586Q9BVV6 1533 aa21.29■■□□□ 1
NELFCD-204ENST00000474543 RIMBP3CA6NJZ7 1639 aa21.28■■□□□ 1
NELFCD-204ENST00000474543 RIMBP3BA6NNM3 1639 aa21.28■■□□□ 1
NELFCD-204ENST00000474543 RIMBP3Q9UFD9 1639 aa21.28■■□□□ 1
NELFCD-204ENST00000474543 JPH4Q96JJ6 628 aa21.28■■□□□ 1
NELFCD-204ENST00000474543 YTHDC1Q96MU7 727 aaKnown RBP21.26■□□□□ 0.99
NELFCD-204ENST00000474543 CLSPNQ9HAW4 1339 aa21.25■□□□□ 0.99
NELFCD-204ENST00000474543 KANK4Q5T7N3 995 aaPredicted RBP21.24■□□□□ 0.99
NELFCD-204ENST00000474543 SHROOM2Q13796 1616 aa21.23■□□□□ 0.99
NELFCD-204ENST00000474543 DHX57Q6P158 1386 aaKnown RBP21.22■□□□□ 0.99
NELFCD-204ENST00000474543 IQGAP2Q13576 1575 aa21.21■□□□□ 0.99
NELFCD-204ENST00000474543 PRG4Q92954 1404 aaPredicted RBP21.2■□□□□ 0.99
NELFCD-204ENST00000474543 CTTNBP2Q8WZ74 1663 aa21.19■□□□□ 0.98
NELFCD-204ENST00000474543 RRBP1Q9P2E9 1410 aaKnown RBP21.18■□□□□ 0.98
NELFCD-204ENST00000474543 ERCC6L2Q5T890 1561 aa21.17■□□□□ 0.98
NELFCD-204ENST00000474543 CYB5RLQ6IPT4 315 aa21.16■□□□□ 0.98
NELFCD-204ENST00000474543 ARHGAP35Q9NRY4 1499 aa21.14■□□□□ 0.97
NELFCD-204ENST00000474543 CARMIL2Q6F5E8 1435 aa21.09■□□□□ 0.97
NELFCD-204ENST00000474543 UGGT2Q9NYU1 1516 aa21.08■□□□□ 0.97
NELFCD-204ENST00000474543 CCNB3Q8WWL7 1395 aa21.06■□□□□ 0.96
NELFCD-204ENST00000474543 DISP1Q96F81 1524 aa21.04■□□□□ 0.96
NELFCD-204ENST00000474543 KIAA0556O60303 1618 aa21■□□□□ 0.95
NELFCD-204ENST00000474543 PTPRGP23470 1445 aa20.98■□□□□ 0.95
NELFCD-204ENST00000474543 P3H3Q8IVL6 736 aa20.97■□□□□ 0.95
NELFCD-204ENST00000474543 TIAM1Q13009 1591 aa20.95■□□□□ 0.94
NELFCD-204ENST00000474543 MAP3K1Q13233 1512 aa20.95■□□□□ 0.94
NELFCD-204ENST00000474543 ITGAEP38570 1179 aa20.92■□□□□ 0.94
NELFCD-204ENST00000474543 SAMD9Q5K651 1589 aa20.91■□□□□ 0.94
NELFCD-204ENST00000474543 RAB3GAP2Q9H2M9 1393 aa20.89■□□□□ 0.93
NELFCD-204ENST00000474543 EFCAB5A4FU69 1503 aa20.87■□□□□ 0.93
NELFCD-204ENST00000474543 LRRC9Q6ZRR7 1453 aa20.86■□□□□ 0.93
NELFCD-204ENST00000474543 MAPKBP1O60336 1514 aa20.86■□□□□ 0.93
NELFCD-204ENST00000474543 FHOD3Q2V2M9 1422 aa20.84■□□□□ 0.93
NELFCD-204ENST00000474543 UACAQ9BZF9 1416 aa20.83■□□□□ 0.93
NELFCD-204ENST00000474543 ADCY10Q96PN6 1610 aa20.82■□□□□ 0.92
NELFCD-204ENST00000474543 NPM1P06748 294 aaKnown RBP eCLIP20.82■□□□□ 0.92
NELFCD-204ENST00000474543 SETD5Q9C0A6 1442 aa20.81■□□□□ 0.92
NELFCD-204ENST00000474543 PHLDB1Q86UU1 1377 aa20.8■□□□□ 0.92
NELFCD-204ENST00000474543 PLB1Q6P1J6 1458 aa20.8■□□□□ 0.92
NELFCD-204ENST00000474543 CFAP43Q8NDM7 1665 aa20.8■□□□□ 0.92
NELFCD-204ENST00000474543 ABCC2Q92887 1545 aa20.77■□□□□ 0.92
NELFCD-204ENST00000474543 UHRF1BP1LA0JNW5 1464 aa20.77■□□□□ 0.92
NELFCD-204ENST00000474543 PCF11O94913 1555 aaKnown RBP20.76■□□□□ 0.91
NELFCD-204ENST00000474543 ABCA8O94911 1581 aa20.74■□□□□ 0.91
NELFCD-204ENST00000474543 FAM50AQ14320 339 aaKnown RBP20.71■□□□□ 0.91
NELFCD-204ENST00000474543 FMN1Q68DA7 1419 aa20.7■□□□□ 0.9
NELFCD-204ENST00000474543 ARID3CA6NKF2 412 aa20.7■□□□□ 0.9
NELFCD-204ENST00000474543 RAPGEF6Q8TEU7 1601 aa20.69■□□□□ 0.9
NELFCD-204ENST00000474543 TRHP20396 242 aaPredicted RBP20.68■□□□□ 0.9
NELFCD-204ENST00000474543 SUPT16HQ9Y5B9 1047 aaKnown RBP20.68■□□□□ 0.9
NELFCD-204ENST00000474543 KDM5BQ9UGL1 1544 aa20.68■□□□□ 0.9
NELFCD-204ENST00000474543 ATP1B4Q9UN42 357 aaPredicted RBP20.66■□□□□ 0.9
NELFCD-204ENST00000474543 FYCO1Q9BQS8 1478 aa20.66■□□□□ 0.9
NELFCD-204ENST00000474543 MYT1Q01538 1121 aa20.66■□□□□ 0.9
NELFCD-204ENST00000474543 SIN3AQ96ST3 1273 aa20.66■□□□□ 0.9
NELFCD-204ENST00000474543 ZCCHC11Q5TAX3 1644 aaKnown RBP20.65■□□□□ 0.9
NELFCD-204ENST00000474543 CASKIN1Q8WXD9 1431 aa20.64■□□□□ 0.89
NELFCD-204ENST00000474543 NUP153P49790 1475 aaKnown RBP20.62■□□□□ 0.89
NELFCD-204ENST00000474543 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.62■□□□□ 0.89
NELFCD-204ENST00000474543 KCNH8Q96L42 1107 aa20.61■□□□□ 0.89
NELFCD-204ENST00000474543 ATP10BO94823 1461 aa20.61■□□□□ 0.89
NELFCD-204ENST00000474543 ASXL2Q76L83 1435 aa20.6■□□□□ 0.89
NELFCD-204ENST00000474543 TIMELESSQ9UNS1 1208 aa20.6■□□□□ 0.89
NELFCD-204ENST00000474543 HECW1Q76N89 1606 aa20.56■□□□□ 0.88
NELFCD-204ENST00000474543 FAM69CQ0P6D2 419 aa20.54■□□□□ 0.88
NELFCD-204ENST00000474543 DDX10Q13206 875 aaKnown RBP20.54■□□□□ 0.88
NELFCD-204ENST00000474543 ABCC10Q5T3U5 1492 aa20.53■□□□□ 0.88
NELFCD-204ENST00000474543 PPP1R15AO75807 674 aaPredicted RBP20.52■□□□□ 0.88
NELFCD-204ENST00000474543 WDR7Q9Y4E6 1490 aa20.52■□□□□ 0.88
NELFCD-204ENST00000474543 EPRSP07814 1512 aaKnown RBP20.51■□□□□ 0.87
NELFCD-204ENST00000474543 FGD6Q6ZV73 1430 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms