RNA–Protein interactions for RNA: ENST00000473869.5

TARDBP-206, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-206ENST00000473869 CHMP7Q8WUX9 453 aaPredicted RBP17.03■□□□□ 0.32
TARDBP-206ENST00000473869 VPS8Q8N3P4 1428 aa17.01■□□□□ 0.31
TARDBP-206ENST00000473869 ARHGAP35Q9NRY4 1499 aa17■□□□□ 0.31
TARDBP-206ENST00000473869 AEBP2Q6ZN18 517 aaPredicted RBP17■□□□□ 0.31
TARDBP-206ENST00000473869 GRIN2AQ12879 1464 aa17■□□□□ 0.31
TARDBP-206ENST00000473869 ARAP1Q96P48 1450 aa16.99■□□□□ 0.31
TARDBP-206ENST00000473869 CHD1O14646 1710 aa16.98■□□□□ 0.31
TARDBP-206ENST00000473869 EFCAB5A4FU69 1503 aa16.95■□□□□ 0.3
TARDBP-206ENST00000473869 IQGAP2Q13576 1575 aa16.92■□□□□ 0.3
TARDBP-206ENST00000473869 CEP170Q5SW79 1584 aa16.91■□□□□ 0.3
TARDBP-206ENST00000473869 APLP2Q06481 763 aa16.91■□□□□ 0.3
TARDBP-206ENST00000473869 PPARGC1BQ86YN6 1023 aaKnown RBP16.9■□□□□ 0.3
TARDBP-206ENST00000473869 P3H3Q8IVL6 736 aa16.9■□□□□ 0.3
TARDBP-206ENST00000473869 KIAA0586Q9BVV6 1533 aa16.9■□□□□ 0.3
TARDBP-206ENST00000473869 TRIM26Q12899 539 aaPredicted RBP16.88■□□□□ 0.29
TARDBP-206ENST00000473869 SAMD9Q5K651 1589 aa16.87■□□□□ 0.29
TARDBP-206ENST00000473869 NUP160Q12769 1436 aa16.87■□□□□ 0.29
TARDBP-206ENST00000473869 FHOD3Q2V2M9 1422 aa16.86■□□□□ 0.29
TARDBP-206ENST00000473869 PCGF6Q9BYE7 350 aa16.85■□□□□ 0.29
TARDBP-206ENST00000473869 UGGT2Q9NYU1 1516 aa16.83■□□□□ 0.28
TARDBP-206ENST00000473869 FMN1Q68DA7 1419 aa16.81■□□□□ 0.28
TARDBP-206ENST00000473869 TTBK1Q5TCY1 1321 aaPredicted RBP16.79■□□□□ 0.28
TARDBP-206ENST00000473869 OSCARQ8IYS5 282 aa16.76■□□□□ 0.27
TARDBP-206ENST00000473869 PCF11O94913 1555 aaKnown RBP16.76■□□□□ 0.27
TARDBP-206ENST00000473869 CLASP1Q7Z460 1538 aa16.75■□□□□ 0.27
TARDBP-206ENST00000473869 JPH4Q96JJ6 628 aa16.75■□□□□ 0.27
TARDBP-206ENST00000473869 CASKIN1Q8WXD9 1431 aa16.75■□□□□ 0.27
TARDBP-206ENST00000473869 FYCO1Q9BQS8 1478 aa16.75■□□□□ 0.27
TARDBP-206ENST00000473869 ATP1B4Q9UN42 357 aaPredicted RBP16.74■□□□□ 0.27
TARDBP-206ENST00000473869 KIAA0556O60303 1618 aa16.74■□□□□ 0.27
TARDBP-206ENST00000473869 DISP1Q96F81 1524 aa16.73■□□□□ 0.27
TARDBP-206ENST00000473869 MAP3K1Q13233 1512 aa16.72■□□□□ 0.27
TARDBP-206ENST00000473869 CARMIL2Q6F5E8 1435 aa16.72■□□□□ 0.27
TARDBP-206ENST00000473869 TIAM1Q13009 1591 aa16.7■□□□□ 0.26
TARDBP-206ENST00000473869 SHROOM2Q13796 1616 aa16.68■□□□□ 0.26
TARDBP-206ENST00000473869 KANK4Q5T7N3 995 aaPredicted RBP16.68■□□□□ 0.26
TARDBP-206ENST00000473869 PRG4Q92954 1404 aaPredicted RBP16.68■□□□□ 0.26
TARDBP-206ENST00000473869 CFAP43Q8NDM7 1665 aa16.66■□□□□ 0.26
TARDBP-206ENST00000473869 HECW1Q76N89 1606 aa16.64■□□□□ 0.25
TARDBP-206ENST00000473869 ERCC6L2Q5T890 1561 aa16.63■□□□□ 0.25
TARDBP-206ENST00000473869 LRRC9Q6ZRR7 1453 aa16.63■□□□□ 0.25
TARDBP-206ENST00000473869 CCDC18Q5T9S5 1454 aa16.6■□□□□ 0.25
TARDBP-206ENST00000473869 LRRIQ1Q96JM4 1722 aa16.59■□□□□ 0.25
TARDBP-206ENST00000473869 RAPGEF6Q8TEU7 1601 aa16.58■□□□□ 0.24
TARDBP-206ENST00000473869 EPRSP07814 1512 aaKnown RBP16.56■□□□□ 0.24
TARDBP-206ENST00000473869 MTUS2Q5JR59 1369 aa16.56■□□□□ 0.24
TARDBP-206ENST00000473869 PTPRGP23470 1445 aa16.54■□□□□ 0.24
TARDBP-206ENST00000473869 PLB1Q6P1J6 1458 aa16.53■□□□□ 0.24
TARDBP-206ENST00000473869 NUP153P49790 1475 aaKnown RBP16.52■□□□□ 0.24
TARDBP-206ENST00000473869 ARID3CA6NKF2 412 aa16.51■□□□□ 0.23
TARDBP-206ENST00000473869 CDK13Q14004 1512 aaKnown RBP16.51■□□□□ 0.23
TARDBP-206ENST00000473869 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
TARDBP-206ENST00000473869 EHBP1L1Q8N3D4 1523 aa16.5■□□□□ 0.23
TARDBP-206ENST00000473869 ABCA8O94911 1581 aa16.49■□□□□ 0.23
TARDBP-206ENST00000473869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.49■□□□□ 0.23
TARDBP-206ENST00000473869 HNRNPUL2Q1KMD3 747 aaKnown RBP16.49■□□□□ 0.23
TARDBP-206ENST00000473869 RRBP1Q9P2E9 1410 aaKnown RBP16.48■□□□□ 0.23
TARDBP-206ENST00000473869 CDK11AQ9UQ88 783 aaPredicted RBP16.48■□□□□ 0.23
TARDBP-206ENST00000473869 SUPT6HQ7KZ85 1726 aaKnown RBP16.46■□□□□ 0.23
TARDBP-206ENST00000473869 PHLDB1Q86UU1 1377 aa16.46■□□□□ 0.23
TARDBP-206ENST00000473869 RIMBP3CA6NJZ7 1639 aa16.46■□□□□ 0.23
TARDBP-206ENST00000473869 RIMBP3BA6NNM3 1639 aa16.46■□□□□ 0.23
TARDBP-206ENST00000473869 RIMBP3Q9UFD9 1639 aa16.46■□□□□ 0.23
TARDBP-206ENST00000473869 CCNB3Q8WWL7 1395 aa16.45■□□□□ 0.22
TARDBP-206ENST00000473869 MAGI3Q5TCQ9 1506 aa16.45■□□□□ 0.22
TARDBP-206ENST00000473869 UACAQ9BZF9 1416 aa16.43■□□□□ 0.22
TARDBP-206ENST00000473869 NCOA2Q15596 1464 aa16.43■□□□□ 0.22
TARDBP-206ENST00000473869 ATP10BO94823 1461 aa16.39■□□□□ 0.21
TARDBP-206ENST00000473869 ABCC2Q92887 1545 aa16.39■□□□□ 0.21
TARDBP-206ENST00000473869 TROQ12816 1431 aaPredicted RBP16.37■□□□□ 0.21
TARDBP-206ENST00000473869 MYOM3Q5VTT5 1437 aa16.37■□□□□ 0.21
TARDBP-206ENST00000473869 PLEKHD1A6NEE1 506 aa16.37■□□□□ 0.21
TARDBP-206ENST00000473869 FAM50AQ14320 339 aaKnown RBP16.37■□□□□ 0.21
TARDBP-206ENST00000473869 CYB5RLQ6IPT4 315 aa16.37■□□□□ 0.21
TARDBP-206ENST00000473869 FGD6Q6ZV73 1430 aa16.36■□□□□ 0.21
TARDBP-206ENST00000473869 ADCY10Q96PN6 1610 aa16.36■□□□□ 0.21
TARDBP-206ENST00000473869 UHRF1BP1LA0JNW5 1464 aa16.33■□□□□ 0.21
TARDBP-206ENST00000473869 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.33■□□□□ 0.2
TARDBP-206ENST00000473869 ITGAEP38570 1179 aa16.32■□□□□ 0.2
TARDBP-206ENST00000473869 ZCCHC11Q5TAX3 1644 aaKnown RBP16.3■□□□□ 0.2
TARDBP-206ENST00000473869 HRCP23327 699 aa16.29■□□□□ 0.2
TARDBP-206ENST00000473869 KIF14Q15058 1648 aa16.29■□□□□ 0.2
TARDBP-206ENST00000473869 MIA2Q96PC5 1412 aa16.29■□□□□ 0.2
TARDBP-206ENST00000473869 PTPN23Q9H3S7 1636 aa16.28■□□□□ 0.2
TARDBP-206ENST00000473869 KDM5BQ9UGL1 1544 aa16.27■□□□□ 0.2
TARDBP-206ENST00000473869 DNAJC5Q9H3Z4 198 aa16.27■□□□□ 0.19
TARDBP-206ENST00000473869 NPM1P06748 294 aaKnown RBP eCLIP16.25■□□□□ 0.19
TARDBP-206ENST00000473869 ITSN2Q9NZM3 1697 aa16.24■□□□□ 0.19
TARDBP-206ENST00000473869 TCOF1Q13428 1488 aaKnown RBP16.24■□□□□ 0.19
TARDBP-206ENST00000473869 CCER1Q8TC90 406 aaPredicted RBP16.23■□□□□ 0.19
TARDBP-206ENST00000473869 ABCC10Q5T3U5 1492 aa16.21■□□□□ 0.19
TARDBP-206ENST00000473869 CFDP1Q9UEE9 299 aaPredicted RBP16.21■□□□□ 0.19
TARDBP-206ENST00000473869 GPATCH8Q9UKJ3 1502 aaKnown RBP16.21■□□□□ 0.19
TARDBP-206ENST00000473869 ZEB1P37275 1124 aaPredicted RBP16.19■□□□□ 0.18
TARDBP-206ENST00000473869 CDC42BPAQ5VT25 1732 aa16.18■□□□□ 0.18
TARDBP-206ENST00000473869 KCNH8Q96L42 1107 aa16.17■□□□□ 0.18
TARDBP-206ENST00000473869 ASXL2Q76L83 1435 aa16.17■□□□□ 0.18
TARDBP-206ENST00000473869 WDR7Q9Y4E6 1490 aa16.16■□□□□ 0.18
TARDBP-206ENST00000473869 SETD5Q9C0A6 1442 aa16.15■□□□□ 0.18
TARDBP-206ENST00000473869 ZNF777Q9ULD5 760 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms