RNA–Protein interactions for RNA: ENST00000473869.5

TARDBP-206, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-206ENST00000473869 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.41□□□□□ -0.745e-8■■■■■ 204.6
TARDBP-206ENST00000473869 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.73□□□□□ -1.012e-9■■■■■ 44.5
TARDBP-206ENST00000473869 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.41□□□□□ -0.588e-12■■■■■ 35.2
TARDBP-206ENST00000473869 DDX3XO00571 662 aaKnown RBP eCLIP11.64□□□□□ -0.553e-30■■■■■ 33.2
TARDBP-206ENST00000473869 SMNDC1O75940 238 aaKnown RBP eCLIP9.93□□□□□ -0.822e-8■■■■■ 29.2
TARDBP-206ENST00000473869 CPSF6Q16630 551 aaKnown RBP eCLIP10.53□□□□□ -0.722e-7■■■■■ 27.5
TARDBP-206ENST00000473869 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.84□□□□□ -0.677e-6■■■■■ 27.5
TARDBP-206ENST00000473869 TARDBPQ13148 414 aaKnown RBP eCLIP9.98□□□□□ -0.811e-13■■■■■ 26.9
TARDBP-206ENST00000473869 KHSRPQ92945 711 aaKnown RBP eCLIP11.37□□□□□ -0.592e-10■■■■□ 24.1
TARDBP-206ENST00000473869 RBM22Q9NW64 420 aaKnown RBP eCLIP11.08□□□□□ -0.641e-7■■■■□ 22.6
TARDBP-206ENST00000473869 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.82□□□□□ -0.843e-6■■■■□ 22.6
TARDBP-206ENST00000473869 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.71□□□□□ -0.531e-7■■■■□ 22.4
TARDBP-206ENST00000473869 SRSF7Q16629 238 aaKnown RBP eCLIP9.13□□□□□ -0.952e-10■■■□□ 18.4
TARDBP-206ENST00000473869 GTF2F1P35269 517 aaKnown RBP eCLIP11.52□□□□□ -0.577e-26■■■□□ 18.2
TARDBP-206ENST00000473869 TIA1P31483 386 aaKnown RBP eCLIP10.4□□□□□ -0.742e-7■■■□□ 17.4
TARDBP-206ENST00000473869 U2AF1Q01081 240 aaKnown RBP eCLIP14.37□□□□□ -0.113e-7■■■□□ 15.3
TARDBP-206ENST00000473869 UPF1Q92900 1129 aaKnown RBP eCLIP13.21□□□□□ -0.292e-11■■■□□ 15.1
TARDBP-206ENST00000473869 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.362e-7■■□□□ 14.3
TARDBP-206ENST00000473869 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.94□□□□□ -0.183e-7■■□□□ 13.6
TARDBP-206ENST00000473869 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.69■□□□□ 0.12e-9■■□□□ 13.4
TARDBP-206ENST00000473869 HNRNPMP52272 730 aaKnown RBP eCLIP16.02■□□□□ 0.151e-6■■□□□ 12.6
TARDBP-206ENST00000473869 PRPF4O43172 522 aaKnown RBP eCLIP10.91□□□□□ -0.662e-14■■□□□ 12.4
TARDBP-206ENST00000473869 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.35□□□□□ -0.752e-21■■□□□ 12.4
TARDBP-206ENST00000473869 CDC40O60508 579 aaKnown RBP eCLIP9.9□□□□□ -0.835e-6■■□□□ 12.3
TARDBP-206ENST00000473869 GRSF1Q12849 480 aaKnown RBP eCLIP10.76□□□□□ -0.691e-11■■□□□ 12.1
TARDBP-206ENST00000473869 EIF4G2P78344 907 aaKnown RBP eCLIP15.34■□□□□ 0.058e-11■■□□□ 12.1
TARDBP-206ENST00000473869 FUSP35637 526 aaKnown RBP eCLIP6.9□□□□□ -1.33e-10■■□□□ 12.1
TARDBP-206ENST00000473869 ZC3H11AO75152 810 aaKnown RBP eCLIP11.72□□□□□ -0.531e-7■■□□□ 12
TARDBP-206ENST00000473869 LSM11P83369 360 aaKnown RBP eCLIP9.95□□□□□ -0.823e-9■■□□□ 11.9
TARDBP-206ENST00000473869 TIAL1Q01085 375 aaKnown RBP eCLIP10.76□□□□□ -0.696e-7■■□□□ 11.7
TARDBP-206ENST00000473869 FXR2P51116 673 aaKnown RBP eCLIP12.25□□□□□ -0.452e-7■■□□□ 11.5
TARDBP-206ENST00000473869 SRSF1Q07955 248 aaKnown RBP eCLIP9.06□□□□□ -0.963e-8■■□□□ 11.4
TARDBP-206ENST00000473869 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.43□□□□□ -0.581e-6■□□□□ 10.9
TARDBP-206ENST00000473869 SF3B4Q15427 424 aaKnown RBP eCLIP9.54□□□□□ -0.884e-7■□□□□ 10.8
TARDBP-206ENST00000473869 U2AF2P26368 475 aaKnown RBP eCLIP12.52□□□□□ -0.412e-10■□□□□ 10.5
TARDBP-206ENST00000473869 DDX6P26196 483 aaKnown RBP eCLIP11.09□□□□□ -0.631e-8■□□□□ 10.3
TARDBP-206ENST00000473869 G3BP1Q13283 466 aaKnown RBP eCLIP13.39□□□□□ -0.275e-9■□□□□ 10.1
TARDBP-206ENST00000473869 ZRANB2O95218 330 aaKnown RBP eCLIP11.39□□□□□ -0.594e-10■□□□□ 10.1
TARDBP-206ENST00000473869 SUB1P53999 127 aaKnown RBP eCLIP8.66□□□□□ -1.021e-11■□□□□ 9.4
TARDBP-206ENST00000473869 QKIQ96PU8 341 aaKnown RBP eCLIP11.19□□□□□ -0.623e-6■□□□□ 9.1
TARDBP-206ENST00000473869 ZNF622Q969S3 477 aaKnown RBP eCLIP13□□□□□ -0.333e-23■□□□□ 9.1
TARDBP-206ENST00000473869 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.92□□□□□ -0.52e-10■□□□□ 9.1
TARDBP-206ENST00000473869 PPIGQ13427 754 aaKnown RBP eCLIP11.36□□□□□ -0.596e-7■□□□□ 8.8
TARDBP-206ENST00000473869 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.06□□□□□ -0.322e-12■□□□□ 8.7
TARDBP-206ENST00000473869 ILF3Q12906 894 aaKnown RBP eCLIP10.5□□□□□ -0.736e-6■□□□□ 8.6
TARDBP-206ENST00000473869 NCBP2P52298 156 aaKnown RBP eCLIP10.25□□□□□ -0.773e-10■□□□□ 8.4
TARDBP-206ENST00000473869 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.37□□□□□ -0.433e-13■□□□□ 8.3
TARDBP-206ENST00000473869 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.03□□□□□ -0.87e-8■□□□□ 8.3
TARDBP-206ENST00000473869 YBX3P16989 372 aaKnown RBP eCLIP12.7□□□□□ -0.388e-13■□□□□ 8.1
Retrieved 49 of 49 RNA–protein pairs in 8.3 ms