RNA–Protein interactions for RNA: ENST00000470743.4

SDHC-206, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 5

Gene SDHC, Length 832 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-206ENST00000470743 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.31
SDHC-206ENST00000470743 BIVM-ERCC5R4GMW8 1640 aa16.96■□□□□ 0.31
SDHC-206ENST00000470743 FAM69CQ0P6D2 419 aa16.95■□□□□ 0.3
SDHC-206ENST00000470743 TSPOAP1O95153 1857 aa16.93■□□□□ 0.3
SDHC-206ENST00000470743 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
SDHC-206ENST00000470743 RUSC2Q8N2Y8 1516 aa16.93■□□□□ 0.3
SDHC-206ENST00000470743 ADCY10Q96PN6 1610 aa16.92■□□□□ 0.3
SDHC-206ENST00000470743 NPM1P06748 294 aaKnown RBP eCLIP16.9■□□□□ 0.3
SDHC-206ENST00000470743 ILDR1Q86SU0 546 aaPredicted RBP16.9■□□□□ 0.3
SDHC-206ENST00000470743 KDM4FA0A1W2PPD8 638 aa16.89■□□□□ 0.29
SDHC-206ENST00000470743 JPH4Q96JJ6 628 aa16.87■□□□□ 0.29
SDHC-206ENST00000470743 ADGRL1O94910 1474 aa16.74■□□□□ 0.27
SDHC-206ENST00000470743 PPRC1Q5VV67 1664 aaKnown RBP16.72■□□□□ 0.27
SDHC-206ENST00000470743 KIAA0586Q9BVV6 1533 aa16.7■□□□□ 0.26
SDHC-206ENST00000470743 HECW2Q9P2P5 1572 aa16.69■□□□□ 0.26
SDHC-206ENST00000470743 CUL7Q14999 1698 aa16.69■□□□□ 0.26
SDHC-206ENST00000470743 GLI2P10070 1586 aa16.66■□□□□ 0.26
SDHC-206ENST00000470743 ABCC2Q92887 1545 aa16.65■□□□□ 0.26
SDHC-206ENST00000470743 SUPT5HO00267 1087 aaKnown RBP16.64■□□□□ 0.25
SDHC-206ENST00000470743 PTPRGP23470 1445 aa16.63■□□□□ 0.25
SDHC-206ENST00000470743 PLB1Q6P1J6 1458 aa16.63■□□□□ 0.25
SDHC-206ENST00000470743 ASXL2Q76L83 1435 aa16.62■□□□□ 0.25
SDHC-206ENST00000470743 TTBK1Q5TCY1 1321 aaPredicted RBP16.62■□□□□ 0.25
SDHC-206ENST00000470743 MAP3K4Q9Y6R4 1608 aa16.59■□□□□ 0.25
SDHC-206ENST00000470743 TNIKQ9UKE5 1360 aa16.58■□□□□ 0.24
SDHC-206ENST00000470743 CARMIL2Q6F5E8 1435 aa16.58■□□□□ 0.24
SDHC-206ENST00000470743 TEX14Q8IWB6 1497 aa16.56■□□□□ 0.24
SDHC-206ENST00000470743 COL17A1Q9UMD9 1497 aaPredicted RBP16.55■□□□□ 0.24
SDHC-206ENST00000470743 IQGAP2Q13576 1575 aa16.55■□□□□ 0.24
SDHC-206ENST00000470743 UHRF1BP1LA0JNW5 1464 aa16.54■□□□□ 0.24
SDHC-206ENST00000470743 KIF27Q86VH2 1401 aa16.54■□□□□ 0.24
SDHC-206ENST00000470743 IGF1RP08069 1367 aa16.54■□□□□ 0.24
SDHC-206ENST00000470743 EPRSP07814 1512 aaKnown RBP16.53■□□□□ 0.24
SDHC-206ENST00000470743 ZCCHC11Q5TAX3 1644 aaKnown RBP16.52■□□□□ 0.23
SDHC-206ENST00000470743 UACAQ9BZF9 1416 aa16.5■□□□□ 0.23
SDHC-206ENST00000470743 KDM5BQ9UGL1 1544 aa16.47■□□□□ 0.23
SDHC-206ENST00000470743 CARMIL1Q5VZK9 1371 aa16.45■□□□□ 0.22
SDHC-206ENST00000470743 DISP1Q96F81 1524 aa16.45■□□□□ 0.22
SDHC-206ENST00000470743 KIF21BO75037 1637 aa16.42■□□□□ 0.22
SDHC-206ENST00000470743 CFAP43Q8NDM7 1665 aa16.41■□□□□ 0.22
SDHC-206ENST00000470743 FBXO41Q8TF61 875 aa16.41■□□□□ 0.22
SDHC-206ENST00000470743 WDR7Q9Y4E6 1490 aa16.41■□□□□ 0.22
SDHC-206ENST00000470743 KIAA0556O60303 1618 aa16.41■□□□□ 0.22
SDHC-206ENST00000470743 UGGT2Q9NYU1 1516 aa16.38■□□□□ 0.21
SDHC-206ENST00000470743 MAGI3Q5TCQ9 1506 aa16.35■□□□□ 0.21
SDHC-206ENST00000470743 CD109Q6YHK3 1445 aa16.33■□□□□ 0.2
SDHC-206ENST00000470743 CTTNBP2Q8WZ74 1663 aa16.3■□□□□ 0.2
SDHC-206ENST00000470743 RAPGEF2Q9Y4G8 1499 aa16.28■□□□□ 0.2
SDHC-206ENST00000470743 ADAMTSL3P82987 1691 aa16.27■□□□□ 0.19
SDHC-206ENST00000470743 PTPRMP28827 1452 aa16.26■□□□□ 0.19
SDHC-206ENST00000470743 ABCA8O94911 1581 aa16.26■□□□□ 0.19
SDHC-206ENST00000470743 KCNH8Q96L42 1107 aa16.24■□□□□ 0.19
SDHC-206ENST00000470743 PCF11O94913 1555 aaKnown RBP16.23■□□□□ 0.19
SDHC-206ENST00000470743 ARAP3Q8WWN8 1544 aa16.23■□□□□ 0.19
SDHC-206ENST00000470743 GOLGA3Q08378 1498 aa16.22■□□□□ 0.19
SDHC-206ENST00000470743 BCORL1Q5H9F3 1711 aa16.21■□□□□ 0.19
SDHC-206ENST00000470743 MADDQ8WXG6 1647 aa16.2■□□□□ 0.18
SDHC-206ENST00000470743 LMTK3Q96Q04 1460 aa16.17■□□□□ 0.18
SDHC-206ENST00000470743 ABCA9Q8IUA7 1624 aa16.16■□□□□ 0.18
SDHC-206ENST00000470743 RIMS1Q86UR5 1692 aaKnown RBP16.15■□□□□ 0.18
SDHC-206ENST00000470743 FRMPD1Q5SYB0 1578 aa16.13■□□□□ 0.17
SDHC-206ENST00000470743 PHLDB1Q86UU1 1377 aa16.12■□□□□ 0.17
SDHC-206ENST00000470743 ARID4BQ4LE39 1312 aaPredicted RBP16.11■□□□□ 0.17
SDHC-206ENST00000470743 ARHGEF40Q8TER5 1519 aa16.1■□□□□ 0.17
SDHC-206ENST00000470743 ARID3CA6NKF2 412 aa16.09■□□□□ 0.17
SDHC-206ENST00000470743 NEO1Q92859 1461 aa16.09■□□□□ 0.17
SDHC-206ENST00000470743 RAPGEF3O95398 923 aa16.08■□□□□ 0.16
SDHC-206ENST00000470743 ATP10BO94823 1461 aa16.06■□□□□ 0.16
SDHC-206ENST00000470743 FAM9AQ8IZU1 332 aaPredicted RBP16.04■□□□□ 0.16
SDHC-206ENST00000470743 RICTORQ6R327 1708 aa16.04■□□□□ 0.16
SDHC-206ENST00000470743 RAPGEF6Q8TEU7 1601 aa16.02■□□□□ 0.16
SDHC-206ENST00000470743 HSPA2P54652 639 aa16.02■□□□□ 0.16
SDHC-206ENST00000470743 CFAP74Q9C0B2 1584 aa16.01■□□□□ 0.15
SDHC-206ENST00000470743 FANCAO15360 1455 aa16■□□□□ 0.15
SDHC-206ENST00000470743 CERKQ8TCT0 537 aa16■□□□□ 0.15
SDHC-206ENST00000470743 FER1L4A9Z1Z3 1794 aa16■□□□□ 0.15
SDHC-206ENST00000470743 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
SDHC-206ENST00000470743 POGZQ7Z3K3 1410 aa15.98■□□□□ 0.15
SDHC-206ENST00000470743 DISP3Q9P2K9 1392 aa15.98■□□□□ 0.15
SDHC-206ENST00000470743 DENND4BO75064 1496 aaPredicted RBP15.97■□□□□ 0.15
SDHC-206ENST00000470743 SIGLEC1Q9BZZ2 1709 aa15.97■□□□□ 0.15
SDHC-206ENST00000470743 PRXQ9BXM0 1461 aa15.97■□□□□ 0.15
SDHC-206ENST00000470743 SAMD9Q5K651 1589 aa15.96■□□□□ 0.15
SDHC-206ENST00000470743 P3H3Q8IVL6 736 aa15.96■□□□□ 0.15
SDHC-206ENST00000470743 TTC37Q6PGP7 1564 aa15.96■□□□□ 0.14
SDHC-206ENST00000470743 AKNAQ7Z591 1439 aa15.95■□□□□ 0.14
SDHC-206ENST00000470743 EFCAB5A4FU69 1503 aa15.95■□□□□ 0.14
SDHC-206ENST00000470743 ZMYM4Q5VZL5 1548 aa15.95■□□□□ 0.14
SDHC-206ENST00000470743 ZFYVE16Q7Z3T8 1539 aa15.95■□□□□ 0.14
SDHC-206ENST00000470743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.94■□□□□ 0.14
SDHC-206ENST00000470743 HNRNPUL2Q1KMD3 747 aaKnown RBP15.94■□□□□ 0.14
SDHC-206ENST00000470743 PREX1Q8TCU6 1659 aa15.94■□□□□ 0.14
SDHC-206ENST00000470743 SOCS7O14512 581 aa15.93■□□□□ 0.14
SDHC-206ENST00000470743 FHOD3Q2V2M9 1422 aa15.93■□□□□ 0.14
SDHC-206ENST00000470743 SPATA31D1Q6ZQQ2 1576 aa15.92■□□□□ 0.14
SDHC-206ENST00000470743 ILDR2Q71H61 639 aa15.92■□□□□ 0.14
SDHC-206ENST00000470743 NUP153P49790 1475 aaKnown RBP15.91■□□□□ 0.14
SDHC-206ENST00000470743 YEATS2Q9ULM3 1422 aa15.89■□□□□ 0.13
SDHC-206ENST00000470743 HECW1Q76N89 1606 aa15.88■□□□□ 0.13
SDHC-206ENST00000470743 MAGI2Q86UL8 1455 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms