RNA–Protein interactions for RNA: ENST00000470743.4

SDHC-206, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 5

Gene SDHC, Length 832 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-206ENST00000470743 NISCHQ9Y2I1 1504 aa23.86■■□□□ 1.41
SDHC-206ENST00000470743 ABCC9O60706 1549 aa22.1■■□□□ 1.13
SDHC-206ENST00000470743 CCDC180Q9P1Z9 1646 aa21.72■■□□□ 1.07
SDHC-206ENST00000470743 DNAJC5BQ9UF47 199 aa21.03■□□□□ 0.96
SDHC-206ENST00000470743 RB1CC1Q8TDY2 1594 aa20.86■□□□□ 0.93
SDHC-206ENST00000470743 NACADO15069 1562 aa20.58■□□□□ 0.88
SDHC-206ENST00000470743 UNC13AQ9UPW8 1703 aa20.45■□□□□ 0.86
SDHC-206ENST00000470743 PABPN1Q86U42 306 aaKnown RBP eCLIP20.42■□□□□ 0.86
SDHC-206ENST00000470743 DCAF8L2P0C7V8 631 aa20.29■□□□□ 0.84
SDHC-206ENST00000470743 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
SDHC-206ENST00000470743 MYO15BQ96JP2 1530 aa20.11■□□□□ 0.81
SDHC-206ENST00000470743 CC2D2AQ9P2K1 1620 aa19.97■□□□□ 0.79
SDHC-206ENST00000470743 CECR2Q9BXF3 1484 aa19.95■□□□□ 0.78
SDHC-206ENST00000470743 SHROOM4Q9ULL8 1493 aa19.93■□□□□ 0.78
SDHC-206ENST00000470743 EIF4G1Q04637 1599 aaKnown RBP19.79■□□□□ 0.76
SDHC-206ENST00000470743 SCRIBQ14160 1630 aa19.74■□□□□ 0.75
SDHC-206ENST00000470743 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
SDHC-206ENST00000470743 DCAF1Q9Y4B6 1507 aa19.68■□□□□ 0.74
SDHC-206ENST00000470743 DNAJC5Q9H3Z4 198 aa19.68■□□□□ 0.74
SDHC-206ENST00000470743 CUX2O14529 1486 aa19.25■□□□□ 0.67
SDHC-206ENST00000470743 ERCC6Q03468 1493 aa19.14■□□□□ 0.65
SDHC-206ENST00000470743 NCAPD3P42695 1498 aa18.95■□□□□ 0.62
SDHC-206ENST00000470743 NESP48681 1621 aa18.84■□□□□ 0.61
SDHC-206ENST00000470743 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
SDHC-206ENST00000470743 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
SDHC-206ENST00000470743 SMARCA2P51531 1590 aa18.81■□□□□ 0.6
SDHC-206ENST00000470743 THOC2Q8NI27 1593 aaKnown RBP18.81■□□□□ 0.6
SDHC-206ENST00000470743 SMARCA4P51532 1647 aa18.77■□□□□ 0.6
SDHC-206ENST00000470743 TRIM41Q8WV44 630 aa18.68■□□□□ 0.58
SDHC-206ENST00000470743 KIF21AQ7Z4S6 1674 aa18.67■□□□□ 0.58
SDHC-206ENST00000470743 BAZ1BQ9UIG0 1483 aaKnown RBP18.67■□□□□ 0.58
SDHC-206ENST00000470743 LAMC3Q9Y6N6 1575 aa18.67■□□□□ 0.58
SDHC-206ENST00000470743 BAZ1AQ9NRL2 1556 aaPredicted RBP18.59■□□□□ 0.57
SDHC-206ENST00000470743 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
SDHC-206ENST00000470743 PDS5BQ9NTI5 1447 aa18.53■□□□□ 0.56
SDHC-206ENST00000470743 MRC2Q9UBG0 1479 aa18.43■□□□□ 0.54
SDHC-206ENST00000470743 WDR62O43379 1518 aa18.41■□□□□ 0.54
SDHC-206ENST00000470743 MROH2BQ7Z745 1585 aa18.38■□□□□ 0.53
SDHC-206ENST00000470743 CADPSQ9ULU8 1353 aa18.34■□□□□ 0.53
SDHC-206ENST00000470743 CEP164Q9UPV0 1460 aa18.28■□□□□ 0.52
SDHC-206ENST00000470743 OSCARQ8IYS5 282 aa18.21■□□□□ 0.51
SDHC-206ENST00000470743 FANCD2Q9BXW9 1451 aa18.19■□□□□ 0.5
SDHC-206ENST00000470743 WIZO95785 1651 aa18.18■□□□□ 0.5
SDHC-206ENST00000470743 RIMBP3CA6NJZ7 1639 aa18.15■□□□□ 0.5
SDHC-206ENST00000470743 RIMBP3BA6NNM3 1639 aa18.15■□□□□ 0.5
SDHC-206ENST00000470743 RIMBP3Q9UFD9 1639 aa18.15■□□□□ 0.5
SDHC-206ENST00000470743 URB2Q14146 1524 aaKnown RBP18.06■□□□□ 0.48
SDHC-206ENST00000470743 CFTRP13569 1480 aa18.05■□□□□ 0.48
SDHC-206ENST00000470743 ARHGEF11O15085 1522 aa18.01■□□□□ 0.47
SDHC-206ENST00000470743 PRDM2Q13029 1718 aa18■□□□□ 0.47
SDHC-206ENST00000470743 TOP2AP11388 1531 aaKnown RBP17.92■□□□□ 0.46
SDHC-206ENST00000470743 ZNF608Q9ULD9 1512 aaPredicted RBP17.9■□□□□ 0.46
SDHC-206ENST00000470743 IFT140Q96RY7 1462 aa17.89■□□□□ 0.45
SDHC-206ENST00000470743 EIF4G3O43432 1585 aaKnown RBP17.87■□□□□ 0.45
SDHC-206ENST00000470743 CHD1O14646 1710 aa17.85■□□□□ 0.45
SDHC-206ENST00000470743 CYB5RLQ6IPT4 315 aa17.82■□□□□ 0.44
SDHC-206ENST00000470743 TRHP20396 242 aaPredicted RBP17.81■□□□□ 0.44
SDHC-206ENST00000470743 TOPBP1Q92547 1522 aa17.79■□□□□ 0.44
SDHC-206ENST00000470743 ARAP1Q96P48 1450 aa17.79■□□□□ 0.44
SDHC-206ENST00000470743 RSF1Q96T23 1441 aaPredicted RBP17.79■□□□□ 0.44
SDHC-206ENST00000470743 DNMBPQ6XZF7 1577 aa17.71■□□□□ 0.43
SDHC-206ENST00000470743 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
SDHC-206ENST00000470743 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
SDHC-206ENST00000470743 AQRO60306 1485 aaKnown RBP eCLIP17.67■□□□□ 0.42
SDHC-206ENST00000470743 AEBP2Q6ZN18 517 aaPredicted RBP17.66■□□□□ 0.42
SDHC-206ENST00000470743 CCDC88BA6NC98 1476 aa17.66■□□□□ 0.42
SDHC-206ENST00000470743 FBLN2P98095 1184 aa17.65■□□□□ 0.42
SDHC-206ENST00000470743 POLA1P09884 1462 aaPredicted RBP17.57■□□□□ 0.4
SDHC-206ENST00000470743 CLASP1Q7Z460 1538 aa17.57■□□□□ 0.4
SDHC-206ENST00000470743 SYNJ1O43426 1573 aa17.53■□□□□ 0.4
SDHC-206ENST00000470743 SNAPC4Q5SXM2 1469 aa17.52■□□□□ 0.4
SDHC-206ENST00000470743 WDR97A6NE52 1622 aa17.5■□□□□ 0.39
SDHC-206ENST00000470743 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
SDHC-206ENST00000470743 TDRD9Q8NDG6 1382 aaKnown RBP17.47■□□□□ 0.39
SDHC-206ENST00000470743 SOGA1O94964 1423 aa17.46■□□□□ 0.39
SDHC-206ENST00000470743 MAGI1Q96QZ7 1491 aaPredicted RBP17.45■□□□□ 0.38
SDHC-206ENST00000470743 CHMP7Q8WUX9 453 aaPredicted RBP17.42■□□□□ 0.38
SDHC-206ENST00000470743 FGD5Q6ZNL6 1462 aa17.41■□□□□ 0.38
SDHC-206ENST00000470743 PBRM1Q86U86 1689 aa17.39■□□□□ 0.37
SDHC-206ENST00000470743 SYNJ2O15056 1496 aa17.39■□□□□ 0.37
SDHC-206ENST00000470743 GRIN2BQ13224 1484 aa17.39■□□□□ 0.37
SDHC-206ENST00000470743 GAPVD1Q14C86 1478 aa17.39■□□□□ 0.37
SDHC-206ENST00000470743 CUX1P39880 1505 aa17.31■□□□□ 0.36
SDHC-206ENST00000470743 ERCC6L2Q5T890 1561 aa17.25■□□□□ 0.35
SDHC-206ENST00000470743 ABCA5Q8WWZ7 1642 aa17.25■□□□□ 0.35
SDHC-206ENST00000470743 KIF13AQ9H1H9 1805 aa17.21■□□□□ 0.35
SDHC-206ENST00000470743 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
SDHC-206ENST00000470743 GRIN2AQ12879 1464 aa17.18■□□□□ 0.34
SDHC-206ENST00000470743 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
SDHC-206ENST00000470743 ADAMTS12P58397 1594 aa17.15■□□□□ 0.34
SDHC-206ENST00000470743 SHROOM2Q13796 1616 aa17.14■□□□□ 0.33
SDHC-206ENST00000470743 CHIC1Q5VXU3 224 aa17.13■□□□□ 0.33
SDHC-206ENST00000470743 NUP160Q12769 1436 aa17.11■□□□□ 0.33
SDHC-206ENST00000470743 FHAD1B1AJZ9 1412 aa17.01■□□□□ 0.31
SDHC-206ENST00000470743 WRNQ14191 1432 aaPredicted RBP eCLIP16.99■□□□□ 0.31
SDHC-206ENST00000470743 KDM6BO15054 1643 aa16.99■□□□□ 0.31
SDHC-206ENST00000470743 DIP2BQ9P265 1576 aa16.98■□□□□ 0.31
SDHC-206ENST00000470743 PRG4Q92954 1404 aaPredicted RBP16.98■□□□□ 0.31
SDHC-206ENST00000470743 ABCC10Q5T3U5 1492 aa16.98■□□□□ 0.31
SDHC-206ENST00000470743 MAPKBP1O60336 1514 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms