RNA–Protein interactions for RNA: ENST00000470180.2

C1orf43-207, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 5

Gene C1orf43, Length 1,861 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-207ENST00000470180 ADAMTS12P58397 1594 aa26.37■■□□□ 1.81
C1orf43-207ENST00000470180 EIF4G3O43432 1585 aaKnown RBP26.36■■□□□ 1.81
C1orf43-207ENST00000470180 TTBK1Q5TCY1 1321 aaPredicted RBP26.34■■□□□ 1.81
C1orf43-207ENST00000470180 APLP2Q06481 763 aa26.28■■□□□ 1.8
C1orf43-207ENST00000470180 SNAPC4Q5SXM2 1469 aa26.26■■□□□ 1.79
C1orf43-207ENST00000470180 EFCAB5A4FU69 1503 aa26.24■■□□□ 1.79
C1orf43-207ENST00000470180 P3H3Q8IVL6 736 aa26.24■■□□□ 1.79
C1orf43-207ENST00000470180 FHOD3Q2V2M9 1422 aa26.18■■□□□ 1.78
C1orf43-207ENST00000470180 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
C1orf43-207ENST00000470180 SAMD9Q5K651 1589 aa26.16■■□□□ 1.78
C1orf43-207ENST00000470180 HRCP23327 699 aa26.16■■□□□ 1.78
C1orf43-207ENST00000470180 KANK4Q5T7N3 995 aaPredicted RBP26.15■■□□□ 1.78
C1orf43-207ENST00000470180 GRIN2AQ12879 1464 aa26.13■■□□□ 1.77
C1orf43-207ENST00000470180 IQGAP2Q13576 1575 aa26.11■■□□□ 1.77
C1orf43-207ENST00000470180 SYNJ2O15056 1496 aa26.09■■□□□ 1.77
C1orf43-207ENST00000470180 PCF11O94913 1555 aaKnown RBP26.08■■□□□ 1.76
C1orf43-207ENST00000470180 MAP3K1Q13233 1512 aa26.07■■□□□ 1.76
C1orf43-207ENST00000470180 KIAA0586Q9BVV6 1533 aa26.05■■□□□ 1.76
C1orf43-207ENST00000470180 CHMP7Q8WUX9 453 aaPredicted RBP26.04■■□□□ 1.76
C1orf43-207ENST00000470180 TIAM1Q13009 1591 aa26.03■■□□□ 1.76
C1orf43-207ENST00000470180 FMN1Q68DA7 1419 aa26.03■■□□□ 1.76
C1orf43-207ENST00000470180 CASKIN1Q8WXD9 1431 aa26.03■■□□□ 1.76
C1orf43-207ENST00000470180 UGGT2Q9NYU1 1516 aa26■■□□□ 1.75
C1orf43-207ENST00000470180 FYCO1Q9BQS8 1478 aa26■■□□□ 1.75
C1orf43-207ENST00000470180 CEP170Q5SW79 1584 aa25.98■■□□□ 1.75
C1orf43-207ENST00000470180 FBLN2P98095 1184 aa25.98■■□□□ 1.75
C1orf43-207ENST00000470180 CFAP43Q8NDM7 1665 aa25.95■■□□□ 1.74
C1orf43-207ENST00000470180 ATP1B4Q9UN42 357 aaPredicted RBP25.94■■□□□ 1.74
C1orf43-207ENST00000470180 NUP160Q12769 1436 aa25.94■■□□□ 1.74
C1orf43-207ENST00000470180 LRRC9Q6ZRR7 1453 aa25.92■■□□□ 1.74
C1orf43-207ENST00000470180 DISP1Q96F81 1524 aa25.89■■□□□ 1.74
C1orf43-207ENST00000470180 LRRIQ1Q96JM4 1722 aa25.87■■□□□ 1.73
C1orf43-207ENST00000470180 KIAA0556O60303 1618 aa25.85■■□□□ 1.73
C1orf43-207ENST00000470180 RRBP1Q9P2E9 1410 aaKnown RBP25.82■■□□□ 1.72
C1orf43-207ENST00000470180 HNRNPUL2Q1KMD3 747 aaKnown RBP25.79■■□□□ 1.72
C1orf43-207ENST00000470180 JPH4Q96JJ6 628 aa25.79■■□□□ 1.72
C1orf43-207ENST00000470180 CHD1O14646 1710 aa25.77■■□□□ 1.72
C1orf43-207ENST00000470180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.75■■□□□ 1.71
C1orf43-207ENST00000470180 PHLDB1Q86UU1 1377 aa25.73■■□□□ 1.71
C1orf43-207ENST00000470180 CCNB3Q8WWL7 1395 aa25.72■■□□□ 1.71
C1orf43-207ENST00000470180 HECW1Q76N89 1606 aa25.72■■□□□ 1.71
C1orf43-207ENST00000470180 CCDC18Q5T9S5 1454 aa25.69■■□□□ 1.7
C1orf43-207ENST00000470180 ZEB1P37275 1124 aaPredicted RBP25.68■■□□□ 1.7
C1orf43-207ENST00000470180 EPRSP07814 1512 aaKnown RBP25.68■■□□□ 1.7
C1orf43-207ENST00000470180 CARMIL2Q6F5E8 1435 aa25.68■■□□□ 1.7
C1orf43-207ENST00000470180 MTUS2Q5JR59 1369 aa25.67■■□□□ 1.7
C1orf43-207ENST00000470180 MAGI3Q5TCQ9 1506 aa25.64■■□□□ 1.7
C1orf43-207ENST00000470180 RAPGEF6Q8TEU7 1601 aa25.63■■□□□ 1.69
C1orf43-207ENST00000470180 CCER1Q8TC90 406 aaPredicted RBP25.63■■□□□ 1.69
C1orf43-207ENST00000470180 CDK13Q14004 1512 aaKnown RBP25.61■■□□□ 1.69
C1orf43-207ENST00000470180 NUP153P49790 1475 aaKnown RBP25.6■■□□□ 1.69
C1orf43-207ENST00000470180 EHBP1L1Q8N3D4 1523 aa25.6■■□□□ 1.69
C1orf43-207ENST00000470180 PRG4Q92954 1404 aaPredicted RBP25.58■■□□□ 1.69
C1orf43-207ENST00000470180 PLB1Q6P1J6 1458 aa25.56■■□□□ 1.68
C1orf43-207ENST00000470180 ARID3CA6NKF2 412 aa25.56■■□□□ 1.68
C1orf43-207ENST00000470180 SUPT6HQ7KZ85 1726 aaKnown RBP25.56■■□□□ 1.68
C1orf43-207ENST00000470180 NCOA2Q15596 1464 aa25.56■■□□□ 1.68
C1orf43-207ENST00000470180 SHROOM2Q13796 1616 aa25.55■■□□□ 1.68
C1orf43-207ENST00000470180 ARHGEF11O15085 1522 aa25.53■■□□□ 1.68
C1orf43-207ENST00000470180 FGD6Q6ZV73 1430 aa25.5■■□□□ 1.67
C1orf43-207ENST00000470180 ITGAEP38570 1179 aa25.49■■□□□ 1.67
C1orf43-207ENST00000470180 FAM50AQ14320 339 aaKnown RBP25.49■■□□□ 1.67
C1orf43-207ENST00000470180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.49■■□□□ 1.67
C1orf43-207ENST00000470180 ABCA8O94911 1581 aa25.49■■□□□ 1.67
C1orf43-207ENST00000470180 CLASP1Q7Z460 1538 aa25.47■■□□□ 1.67
C1orf43-207ENST00000470180 MYOM3Q5VTT5 1437 aa25.47■■□□□ 1.67
C1orf43-207ENST00000470180 PTPRGP23470 1445 aa25.44■■□□□ 1.66
C1orf43-207ENST00000470180 ERCC6L2Q5T890 1561 aa25.42■■□□□ 1.66
C1orf43-207ENST00000470180 CDK11AQ9UQ88 783 aaPredicted RBP25.39■■□□□ 1.66
C1orf43-207ENST00000470180 ATP10BO94823 1461 aa25.36■■□□□ 1.65
C1orf43-207ENST00000470180 PTPN23Q9H3S7 1636 aa25.35■■□□□ 1.65
C1orf43-207ENST00000470180 TROQ12816 1431 aaPredicted RBP25.35■■□□□ 1.65
C1orf43-207ENST00000470180 TCOF1Q13428 1488 aaKnown RBP25.31■■□□□ 1.64
C1orf43-207ENST00000470180 MIA2Q96PC5 1412 aa25.3■■□□□ 1.64
C1orf43-207ENST00000470180 SETD5Q9C0A6 1442 aa25.3■■□□□ 1.64
C1orf43-207ENST00000470180 UACAQ9BZF9 1416 aa25.29■■□□□ 1.64
C1orf43-207ENST00000470180 DHX57Q6P158 1386 aaKnown RBP25.29■■□□□ 1.64
C1orf43-207ENST00000470180 PTPRKQ15262 1439 aa25.29■■□□□ 1.64
C1orf43-207ENST00000470180 RAB3GAP2Q9H2M9 1393 aa25.28■■□□□ 1.64
C1orf43-207ENST00000470180 ADCY10Q96PN6 1610 aa25.27■■□□□ 1.64
C1orf43-207ENST00000470180 KIF14Q15058 1648 aa25.24■■□□□ 1.63
C1orf43-207ENST00000470180 PLEKHD1A6NEE1 506 aa25.24■■□□□ 1.63
C1orf43-207ENST00000470180 ABCC2Q92887 1545 aa25.19■■□□□ 1.62
C1orf43-207ENST00000470180 CLSPNQ9HAW4 1339 aa25.17■■□□□ 1.62
C1orf43-207ENST00000470180 GPATCH8Q9UKJ3 1502 aaKnown RBP25.17■■□□□ 1.62
C1orf43-207ENST00000470180 ABCC10Q5T3U5 1492 aa25.15■■□□□ 1.62
C1orf43-207ENST00000470180 OSCARQ8IYS5 282 aa25.15■■□□□ 1.62
C1orf43-207ENST00000470180 ZNF644Q9H582 1327 aaPredicted RBP25.14■■□□□ 1.62
C1orf43-207ENST00000470180 HFM1A2PYH4 1435 aa25.13■■□□□ 1.61
C1orf43-207ENST00000470180 ITSN2Q9NZM3 1697 aa25.13■■□□□ 1.61
C1orf43-207ENST00000470180 UHRF1BP1LA0JNW5 1464 aa25.12■■□□□ 1.61
C1orf43-207ENST00000470180 CFDP1Q9UEE9 299 aaPredicted RBP25.1■■□□□ 1.61
C1orf43-207ENST00000470180 NAIPQ13075 1403 aa25.1■■□□□ 1.61
C1orf43-207ENST00000470180 CDC42BPAQ5VT25 1732 aa25.09■■□□□ 1.61
C1orf43-207ENST00000470180 CHIC2Q9UKJ5 165 aa25.06■■□□□ 1.6
C1orf43-207ENST00000470180 DNMT1P26358 1616 aaKnown RBP25.06■■□□□ 1.6
C1orf43-207ENST00000470180 ABCC5O15440 1437 aa25.05■■□□□ 1.6
C1orf43-207ENST00000470180 DAPK1P53355 1430 aa25.05■■□□□ 1.6
C1orf43-207ENST00000470180 KDM5BQ9UGL1 1544 aa25.04■■□□□ 1.6
C1orf43-207ENST00000470180 CAMSAP2Q08AD1 1489 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms